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The map label for this gene is ydgI [H]

Identifier: 160876348

GI number: 160876348

Start: 3815368

End: 3816768

Strand: Reverse

Name: ydgI [H]

Synonym: Sbal195_3242

Alternate gene names: 160876348

Gene position: 3816768-3815368 (Counterclockwise)

Preceding gene: 160876349

Following gene: 160876345

Centisome position: 71.38

GC content: 52.68

Gene sequence:

>1401_bases
ATGAAAGAGAACAGGATAGGTCTCTGGTCACTCACAGCCCTAGTGTTCAGCTCTATGGTAGGTGCGGGGATTTTTAGCCT
GCCGCAAAACATGGCCGAAGTGGCGGGTGTTCGAGCTGTGCTGATTGGCTGGGGGATCACTGGTGCGGGCATCTTGGCAT
TGGCTGCGAGTTTCCTCTATCTGTCGCGCTTGAAGCCTGAGCTTGATGGCGGCATTTATACCTACGCCAGAGCCGGTTTT
GGTGAGCTGGTGGGCTTTTTTTCTGCTTGGGGCTATTGGCTTTGCGCCACCATAGGCGTGGTGGGATATTTAGTGATTGC
GTTTGCTGCCCTTGGCAGCTTTGTCGATACGCCGCAGCAAGTTTGGTTTGGCGAGGGCAATACGCTGGCCGCTTTTATCG
GTGAGTCGTGCATTTTGTGGGCGGTGCATTGGTTGGTCTCCCGCGGCGTACAGCAGGCCGCCATGTTCAATCTGGTGGCG
ACATTAGCCAAGAGTTTGCCGCTATTGCTGTTCGTACTGTTTGCCTGCTATTACTTTGACCCTGTGACTTTTGCTCAGGA
CCAAGCGGCCAGTACTTTAGCTGTGCCAGTGTCTGAACAAGTGCGTAACACTATGCTGATCACGCTTTGGGTATTTACCG
GTATCGAAGGTGCGGCAGTGTTATCGGCGCGTGCTAAAAATAAGCGGGATGTGGGCACGGCGACTGTCCTTGGAGTTGTG
CTGGCGCTACTACTTTATGTGCTTATCTCTGTGTTAGCGCTGGGGATTTTAGCTCGTCCTGAACTTGCAGCACTGCCTAA
TCCCTCTATGGCGGGACTGATGGGGCACATGAGCGGCTCTTGGGGTAAGGCGCTGATCAGTGCCGGGCTTATTGTTTCTG
TGCTGGCCTCCTATGTGAGTTGGACCCTGTTCTCGGCAGAGGTGCCTTTCAGCGCAGCCCGCCACGGTGCTTTCCCTGCC
ATCTTTTTGCGGCAGAATCGCAATGGCACGCCGATCGCTTCCCTCTGGTTATCTAGCTTAACAGTGCAGTTTTGTTTGAT
ACTGGTATGGCTGCTAGGTAAGGGTTATACCAATCTGTTACTTATTTCTACGTCGATGATTTTAGTGCCTTATCTATTGA
TTGGACTGTTCCTGTTGAAGCTTTCTTTGAGTGGACAGGGCAATGGGCTGATGAGAATTGTGGCGCTGGTGGCGAGCGGT
TATGGACTCTGGCTACTCTATGCCGCAGGCGTCGAGTATCTGTTGCTGTCCTTGCTACTCTACGGCCCTGGGTTACTCTT
GTTTCTCTACAGTCGCCGCCAACTTGTCGATGGTAAAAAGCTTAACGGACGTGAGCGATTGCTCGCAGGGGCGACGTTGC
TGAGTTTGTTCCCCGCGTTATGGTCGTTTTGTTATCAATAA

Upstream 100 bases:

>100_bases
GCGTTGGCGCGCGGTAGGGGCTTCGCTTATCGGTGGTTGCTGCGGCATTGGTCCCGAACACATTCAGGCTCTTTCTACTC
GTTTGCGCTAAGGATTTTGT

Downstream 100 bases:

>100_bases
AGGATTGCTGTTGGTTAAAGTGGGCAGTGCTTTATCGAATTGGGCATAAAAAAATCGGCCACAACAATTGTTGTGGCCGA
TTTCACTAAAACACGTGGAA

Product: amino acid permease-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MKENRIGLWSLTALVFSSMVGAGIFSLPQNMAEVAGVRAVLIGWGITGAGILALAASFLYLSRLKPELDGGIYTYARAGF
GELVGFFSAWGYWLCATIGVVGYLVIAFAALGSFVDTPQQVWFGEGNTLAAFIGESCILWAVHWLVSRGVQQAAMFNLVA
TLAKSLPLLLFVLFACYYFDPVTFAQDQAASTLAVPVSEQVRNTMLITLWVFTGIEGAAVLSARAKNKRDVGTATVLGVV
LALLLYVLISVLALGILARPELAALPNPSMAGLMGHMSGSWGKALISAGLIVSVLASYVSWTLFSAEVPFSAARHGAFPA
IFLRQNRNGTPIASLWLSSLTVQFCLILVWLLGKGYTNLLLISTSMILVPYLLIGLFLLKLSLSGQGNGLMRIVALVASG
YGLWLLYAAGVEYLLLSLLLYGPGLLLFLYSRRQLVDGKKLNGRERLLAGATLLSLFPALWSFCYQ

Sequences:

>Translated_466_residues
MKENRIGLWSLTALVFSSMVGAGIFSLPQNMAEVAGVRAVLIGWGITGAGILALAASFLYLSRLKPELDGGIYTYARAGF
GELVGFFSAWGYWLCATIGVVGYLVIAFAALGSFVDTPQQVWFGEGNTLAAFIGESCILWAVHWLVSRGVQQAAMFNLVA
TLAKSLPLLLFVLFACYYFDPVTFAQDQAASTLAVPVSEQVRNTMLITLWVFTGIEGAAVLSARAKNKRDVGTATVLGVV
LALLLYVLISVLALGILARPELAALPNPSMAGLMGHMSGSWGKALISAGLIVSVLASYVSWTLFSAEVPFSAARHGAFPA
IFLRQNRNGTPIASLWLSSLTVQFCLILVWLLGKGYTNLLLISTSMILVPYLLIGLFLLKLSLSGQGNGLMRIVALVASG
YGLWLLYAAGVEYLLLSLLLYGPGLLLFLYSRRQLVDGKKLNGRERLLAGATLLSLFPALWSFCYQ
>Mature_466_residues
MKENRIGLWSLTALVFSSMVGAGIFSLPQNMAEVAGVRAVLIGWGITGAGILALAASFLYLSRLKPELDGGIYTYARAGF
GELVGFFSAWGYWLCATIGVVGYLVIAFAALGSFVDTPQQVWFGEGNTLAAFIGESCILWAVHWLVSRGVQQAAMFNLVA
TLAKSLPLLLFVLFACYYFDPVTFAQDQAASTLAVPVSEQVRNTMLITLWVFTGIEGAAVLSARAKNKRDVGTATVLGVV
LALLLYVLISVLALGILARPELAALPNPSMAGLMGHMSGSWGKALISAGLIVSVLASYVSWTLFSAEVPFSAARHGAFPA
IFLRQNRNGTPIASLWLSSLTVQFCLILVWLLGKGYTNLLLISTSMILVPYLLIGLFLLKLSLSGQGNGLMRIVALVASG
YGLWLLYAAGVEYLLLSLLLYGPGLLLFLYSRRQLVDGKKLNGRERLLAGATLLSLFPALWSFCYQ

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=459, Percent_Identity=59.4771241830065, Blast_Score=521, Evalue=1e-149,
Organism=Escherichia coli, GI2367353, Length=429, Percent_Identity=29.3706293706294, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI1790575, Length=443, Percent_Identity=25.2821670428894, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1786908, Length=428, Percent_Identity=24.7663551401869, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004754 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50048; Mature: 50048

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENRIGLWSLTALVFSSMVGAGIFSLPQNMAEVAGVRAVLIGWGITGAGILALAASFLY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LSRLKPELDGGIYTYARAGFGELVGFFSAWGYWLCATIGVVGYLVIAFAALGSFVDTPQQ
HHHCCHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VWFGEGNTLAAFIGESCILWAVHWLVSRGVQQAAMFNLVATLAKSLPLLLFVLFACYYFD
HEECCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PVTFAQDQAASTLAVPVSEQVRNTMLITLWVFTGIEGAAVLSARAKNKRDVGTATVLGVV
CCCCCHHHCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHH
LALLLYVLISVLALGILARPELAALPNPSMAGLMGHMSGSWGKALISAGLIVSVLASYVS
HHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
WTLFSAEVPFSAARHGAFPAIFLRQNRNGTPIASLWLSSLTVQFCLILVWLLGKGYTNLL
HHHHCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LISTSMILVPYLLIGLFLLKLSLSGQGNGLMRIVALVASGYGLWLLYAAGVEYLLLSLLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
YGPGLLLFLYSRRQLVDGKKLNGRERLLAGATLLSLFPALWSFCYQ
HCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKENRIGLWSLTALVFSSMVGAGIFSLPQNMAEVAGVRAVLIGWGITGAGILALAASFLY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LSRLKPELDGGIYTYARAGFGELVGFFSAWGYWLCATIGVVGYLVIAFAALGSFVDTPQQ
HHHCCHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VWFGEGNTLAAFIGESCILWAVHWLVSRGVQQAAMFNLVATLAKSLPLLLFVLFACYYFD
HEECCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PVTFAQDQAASTLAVPVSEQVRNTMLITLWVFTGIEGAAVLSARAKNKRDVGTATVLGVV
CCCCCHHHCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHH
LALLLYVLISVLALGILARPELAALPNPSMAGLMGHMSGSWGKALISAGLIVSVLASYVS
HHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
WTLFSAEVPFSAARHGAFPAIFLRQNRNGTPIASLWLSSLTVQFCLILVWLLGKGYTNLL
HHHHCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LISTSMILVPYLLIGLFLLKLSLSGQGNGLMRIVALVASGYGLWLLYAAGVEYLLLSLLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
YGPGLLLFLYSRRQLVDGKKLNGRERLLAGATLLSLFPALWSFCYQ
HCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]