| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is mmuM [H]
Identifier: 160876349
GI number: 160876349
Start: 3816778
End: 3817680
Strand: Reverse
Name: mmuM [H]
Synonym: Sbal195_3243
Alternate gene names: 160876349
Gene position: 3817680-3816778 (Counterclockwise)
Preceding gene: 160876350
Following gene: 160876348
Centisome position: 71.39
GC content: 55.48
Gene sequence:
>903_bases ATGGATAAGCAGCAACTGTGGGTTTTGGATGGCGGCATGGGGCGTGAGTTGGCAAGACGGGGCGCACCCTTTCGCCAACC TGAGTGGTCGGCATTGGCATTGATAGAAGCGCCGCAAACCGTGACTGAGGTACATCAAGCTTACGTAGCCAGCGGTGCCA AAGTCATCACCACCAACAGTTATGCACTCGTGCCATTTCATATCGGCGATGAGCGTTTTGCCGCCGAGGGTGAAGTACTG GCTGCATTGGCGGGCAAACTGGCACGGGATGTCGTGGATGAACACGCAAATGCGGTTCGCGTCGCGGGCTCATTGCCACC CTTGTTTGGCTCTTACCGTGCCGATTTATTTGATGCCGCGAGGGTGAGTGAGTTGGCGCTCCCACTCATTCGAGCGTTGT CGCCCAGTATCGATCTCTGGTTAGCCGAAACCATGAGTTTGATTGCCGAGCCTTTAGCCATCAAGGCCTTGCTGCCAGAA GATGGCAAACCATTTTGGGTTTCTTTTACCTTAGAGGACGAGACGTTAGGTAGCGAACCGACACTTCGCTCCGGTGAGCG GGTGGCAGATGCTATCGACGCGTTAGTAGCAGTCGGTGTGGATGCGATTCTGTTCAACTGTTGTCAGCCTGAGGTGATTG AGGCGGCATTACAGGTGGCCAGCGATAGATTGAGTGCTCTGGGGCGTGCCGATATTCGACTCGGTGCCTATGCCAATGCA TTTCCTCCTCAGCCGAAAGAGGCAACGGCTAACGATGGTCTGGATGAGATCCGTGCCGATCTTGGGCCGCTTGATTATCT CGGTTGGGCTGAGCGTTGGCGCGCGGTAGGGGCTTCGCTTATCGGTGGTTGCTGCGGCATTGGTCCCGAACACATTCAGG CTCTTTCTACTCGTTTGCGCTAA
Upstream 100 bases:
>100_bases TGTCGTCATCGAACGCAGCAAGGTGCTAGGTCGCAGGATTCTCATTAACTATGAGTGCTTTAGTAAAACGAAGTCGCATA AAAAGATTGAGGTAAGCAAG
Downstream 100 bases:
>100_bases GGATTTTGTATGAAAGAGAACAGGATAGGTCTCTGGTCACTCACAGCCCTAGTGTTCAGCTCTATGGTAGGTGCGGGGAT TTTTAGCCTGCCGCAAAACA
Product: homocysteine S-methyltransferase
Products: NA
Alternate protein names: S-methylmethionine:homocysteine methyltransferase [H]
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MDKQQLWVLDGGMGRELARRGAPFRQPEWSALALIEAPQTVTEVHQAYVASGAKVITTNSYALVPFHIGDERFAAEGEVL AALAGKLARDVVDEHANAVRVAGSLPPLFGSYRADLFDAARVSELALPLIRALSPSIDLWLAETMSLIAEPLAIKALLPE DGKPFWVSFTLEDETLGSEPTLRSGERVADAIDALVAVGVDAILFNCCQPEVIEAALQVASDRLSALGRADIRLGAYANA FPPQPKEATANDGLDEIRADLGPLDYLGWAERWRAVGASLIGGCCGIGPEHIQALSTRLR
Sequences:
>Translated_300_residues MDKQQLWVLDGGMGRELARRGAPFRQPEWSALALIEAPQTVTEVHQAYVASGAKVITTNSYALVPFHIGDERFAAEGEVL AALAGKLARDVVDEHANAVRVAGSLPPLFGSYRADLFDAARVSELALPLIRALSPSIDLWLAETMSLIAEPLAIKALLPE DGKPFWVSFTLEDETLGSEPTLRSGERVADAIDALVAVGVDAILFNCCQPEVIEAALQVASDRLSALGRADIRLGAYANA FPPQPKEATANDGLDEIRADLGPLDYLGWAERWRAVGASLIGGCCGIGPEHIQALSTRLR >Mature_300_residues MDKQQLWVLDGGMGRELARRGAPFRQPEWSALALIEAPQTVTEVHQAYVASGAKVITTNSYALVPFHIGDERFAAEGEVL AALAGKLARDVVDEHANAVRVAGSLPPLFGSYRADLFDAARVSELALPLIRALSPSIDLWLAETMSLIAEPLAIKALLPE DGKPFWVSFTLEDETLGSEPTLRSGERVADAIDALVAVGVDAILFNCCQPEVIEAALQVASDRLSALGRADIRLGAYANA FPPQPKEATANDGLDEIRADLGPLDYLGWAERWRAVGASLIGGCCGIGPEHIQALSTRLR
Specific function: Catalyzes methyl transfer from S-methylmethionine or S- adenosylmethionine (less efficient) to homocysteine, selenohomocysteine and less efficiently selenocysteine [H]
COG id: COG2040
COG function: function code E; Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Hcy-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786456, Length=321, Percent_Identity=32.398753894081, Blast_Score=88, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003726 [H]
Pfam domain/function: PF02574 S-methyl_trans [H]
EC number: =2.1.1.10 [H]
Molecular weight: Translated: 32117; Mature: 32117
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS50970 HCY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKQQLWVLDGGMGRELARRGAPFRQPEWSALALIEAPQTVTEVHQAYVASGAKVITTNS CCCCEEEEEECCCCHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEECC YALVPFHIGDERFAAEGEVLAALAGKLARDVVDEHANAVRVAGSLPPLFGSYRADLFDAA EEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH RVSELALPLIRALSPSIDLWLAETMSLIAEPLAIKALLPEDGKPFWVSFTLEDETLGSEP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEEECCCCCCCC TLRSGERVADAIDALVAVGVDAILFNCCQPEVIEAALQVASDRLSALGRADIRLGAYANA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC FPPQPKEATANDGLDEIRADLGPLDYLGWAERWRAVGASLIGGCCGIGPEHIQALSTRLR CCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure MDKQQLWVLDGGMGRELARRGAPFRQPEWSALALIEAPQTVTEVHQAYVASGAKVITTNS CCCCEEEEEECCCCHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEECC YALVPFHIGDERFAAEGEVLAALAGKLARDVVDEHANAVRVAGSLPPLFGSYRADLFDAA EEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH RVSELALPLIRALSPSIDLWLAETMSLIAEPLAIKALLPEDGKPFWVSFTLEDETLGSEP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEEECCCCCCCC TLRSGERVADAIDALVAVGVDAILFNCCQPEVIEAALQVASDRLSALGRADIRLGAYANA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC FPPQPKEATANDGLDEIRADLGPLDYLGWAERWRAVGASLIGGCCGIGPEHIQALSTRLR CCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 9882684; 10026151 [H]