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The map label for this gene is hlyB [H]

Identifier: 160876326

GI number: 160876326

Start: 3788091

End: 3789710

Strand: Direct

Name: hlyB [H]

Synonym: Sbal195_3220

Alternate gene names: 160876326

Gene position: 3788091-3789710 (Clockwise)

Preceding gene: 160876325

Following gene: 160876328

Centisome position: 70.84

GC content: 43.89

Gene sequence:

>1620_bases
ATGAATTTCTTTAATAACATTTCTATTTTTAAAAAAGTTATCGCGATATTTATTTTAGCAGTCATAATTTTCGCTTTAAA
CTTAAGCATTAGTGTTATCTCCATAAATAAAAATCGCACCACTCTTAACTATATGGAGCAGCAAGTTTACCAAAGGGTTG
AACTCGCCAATCAAAACGTGTTTTTTATCCAACGACTCGATGAGCTTTATACTCAATCCGTTTCTTTTGCCGACGAAGAC
CTGTTAACCAATGCAGGTACTATGTACGAATCTTTACGCAAAAACCTCCAACAGTTAGACAACGTCGATCCCTCACAAGC
CAATCAACTCAACAATCTATCGGCTAAATTAACCCGTTATAACGACATGACAATTAAGCTGGCTAAAGGCATGCTGGCAG
GTACGATTGATATGGCAAATATTGGCCAAATCAGCCAAGAAAAATCCCAAGCCTATGAAGCAGTGCTCAATGAAATACAA
AACTACAAACAAGAAAAAGTACTCGAATTTAAACAATCAATAAAAGAAGCAGGCGACAGATCGGAGCAAAGTTTATGGCT
TACCCTCTCCATCGGTATCGCTTTGCTGATCGTGATGTTTATTGTCACTATCGCCATTGCACGCGCCATTAGCTCTTCTG
CCCGTAATGTTGCCCAGTCATTGAGTGAACTCGCCGATGGTAAGGGTGATCTTAGCCATAAACTTAACGTGTCTGGTAGT
GATGAACTCGGCCAAGTGTCGAGTAACTTCAATCGATTCCTTGGGTTACTCGGTGATTCGATTCGCAGGGTGGTGAATGT
TACCGATCCCTTGCTTGCAAGCTCGCACTTACTCAAACAACGTATGGAAGATGCAACGCATGCAACTCAGAAACAAAGCC
ATGATGCCAGTGCTGTGCAAGTCTCAATGGAAGATATGCGCCACTCTGTCATCGAAATTTCACAAAATGCGCGCCAAGCC
GCCAGTGCTGCCCAGATAGCCGAAAAAGAAGCCATGCAAGGTATGACTGTCGTCCAGCGGACTATTGATATTTCACAGGA
ATTAAATACGGGGATTCAGGCCGCTTCTAACTCGATTAATGAACTTGCCAGAGACACTGAAAATGTCACCTCTATCTTAA
ATGTGATTACCTCGATTGCTGAGCAAACTAACCTGTTGGCACTGAACGCTGCCATCGAAGCTGCCCGCGCGGGTGAGCAA
GGACGGGGCTTTGCCGTGGTAGCGGATGAAGTCCGTGCCCTCGCCTCTAAAACCGCAGATGCAACCACAGAAATTCGTCA
TGTACTGCAAAACCTTAAAACGGCGGCCATTTCTTCGGTCAATACCATGAATGTGGCCATGTCGAAATCTTCAGAAAATG
AAAACAATGCCCAAAACACAGGCAGTGCATTAAAATCGATTCAGCAGCAGATTGTCAGTATCAATAGCATGAACACCCAC
ATTGCCTCGGCAACGGAAGAGCAAGCCTCAGTCGCTTCCCAAGTGGTCGATAATGTCGTCAATATGAACGCTTCATTCGA
ACAGACATTGCAAATTCTGTCGCAGGTTCGCAATGTCTCCGAAGGGCTAGTTGATTTTGCCGATGAACTGAAAAACGCCA
CCTCACAATTCAAACTTTGA

Upstream 100 bases:

>100_bases
GCTATATTGATAGTAGTGAGGCCAATGATTCGGTAAAAGTTATTGCCGAGTTTTAGATTGGAGTGCCGGGCTTTAGCTCG
GCACAACTTGGGGGCAAGGG

Downstream 100 bases:

>100_bases
GGACGACTTATAATGATTGCTTGTGATCATGGCTTGAGCTGATTGTGTGAGATAGTTTTCCTCCACAAAAAATCGGTATT
GAGTAACTCAATACCGATTT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 539

Protein sequence:

>539_residues
MNFFNNISIFKKVIAIFILAVIIFALNLSISVISINKNRTTLNYMEQQVYQRVELANQNVFFIQRLDELYTQSVSFADED
LLTNAGTMYESLRKNLQQLDNVDPSQANQLNNLSAKLTRYNDMTIKLAKGMLAGTIDMANIGQISQEKSQAYEAVLNEIQ
NYKQEKVLEFKQSIKEAGDRSEQSLWLTLSIGIALLIVMFIVTIAIARAISSSARNVAQSLSELADGKGDLSHKLNVSGS
DELGQVSSNFNRFLGLLGDSIRRVVNVTDPLLASSHLLKQRMEDATHATQKQSHDASAVQVSMEDMRHSVIEISQNARQA
ASAAQIAEKEAMQGMTVVQRTIDISQELNTGIQAASNSINELARDTENVTSILNVITSIAEQTNLLALNAAIEAARAGEQ
GRGFAVVADEVRALASKTADATTEIRHVLQNLKTAAISSVNTMNVAMSKSSENENNAQNTGSALKSIQQQIVSINSMNTH
IASATEEQASVASQVVDNVVNMNASFEQTLQILSQVRNVSEGLVDFADELKNATSQFKL

Sequences:

>Translated_539_residues
MNFFNNISIFKKVIAIFILAVIIFALNLSISVISINKNRTTLNYMEQQVYQRVELANQNVFFIQRLDELYTQSVSFADED
LLTNAGTMYESLRKNLQQLDNVDPSQANQLNNLSAKLTRYNDMTIKLAKGMLAGTIDMANIGQISQEKSQAYEAVLNEIQ
NYKQEKVLEFKQSIKEAGDRSEQSLWLTLSIGIALLIVMFIVTIAIARAISSSARNVAQSLSELADGKGDLSHKLNVSGS
DELGQVSSNFNRFLGLLGDSIRRVVNVTDPLLASSHLLKQRMEDATHATQKQSHDASAVQVSMEDMRHSVIEISQNARQA
ASAAQIAEKEAMQGMTVVQRTIDISQELNTGIQAASNSINELARDTENVTSILNVITSIAEQTNLLALNAAIEAARAGEQ
GRGFAVVADEVRALASKTADATTEIRHVLQNLKTAAISSVNTMNVAMSKSSENENNAQNTGSALKSIQQQIVSINSMNTH
IASATEEQASVASQVVDNVVNMNASFEQTLQILSQVRNVSEGLVDFADELKNATSQFKL
>Mature_539_residues
MNFFNNISIFKKVIAIFILAVIIFALNLSISVISINKNRTTLNYMEQQVYQRVELANQNVFFIQRLDELYTQSVSFADED
LLTNAGTMYESLRKNLQQLDNVDPSQANQLNNLSAKLTRYNDMTIKLAKGMLAGTIDMANIGQISQEKSQAYEAVLNEIQ
NYKQEKVLEFKQSIKEAGDRSEQSLWLTLSIGIALLIVMFIVTIAIARAISSSARNVAQSLSELADGKGDLSHKLNVSGS
DELGQVSSNFNRFLGLLGDSIRRVVNVTDPLLASSHLLKQRMEDATHATQKQSHDASAVQVSMEDMRHSVIEISQNARQA
ASAAQIAEKEAMQGMTVVQRTIDISQELNTGIQAASNSINELARDTENVTSILNVITSIAEQTNLLALNAAIEAARAGEQ
GRGFAVVADEVRALASKTADATTEIRHVLQNLKTAAISSVNTMNVAMSKSSENENNAQNTGSALKSIQQQIVSINSMNTH
IASATEEQASVASQVVDNVVNMNASFEQTLQILSQVRNVSEGLVDFADELKNATSQFKL

Specific function: May form a pore through which the hemolysin can be exported [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=321, Percent_Identity=29.9065420560748, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788195, Length=284, Percent_Identity=32.7464788732394, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1788194, Length=379, Percent_Identity=28.4960422163588, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1787690, Length=346, Percent_Identity=27.7456647398844, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1789453, Length=361, Percent_Identity=28.2548476454294, Blast_Score=96, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR000727 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58910; Mature: 58910

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFFNNISIFKKVIAIFILAVIIFALNLSISVISINKNRTTLNYMEQQVYQRVELANQNV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCH
FFIQRLDELYTQSVSFADEDLLTNAGTMYESLRKNLQQLDNVDPSQANQLNNLSAKLTRY
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
NDMTIKLAKGMLAGTIDMANIGQISQEKSQAYEAVLNEIQNYKQEKVLEFKQSIKEAGDR
CCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SEQSLWLTLSIGIALLIVMFIVTIAIARAISSSARNVAQSLSELADGKGDLSHKLNVSGS
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC
DELGQVSSNFNRFLGLLGDSIRRVVNVTDPLLASSHLLKQRMEDATHATQKQSHDASAVQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VSMEDMRHSVIEISQNARQAASAAQIAEKEAMQGMTVVQRTIDISQELNTGIQAASNSIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELARDTENVTSILNVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASKTAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCH
ATTEIRHVLQNLKTAAISSVNTMNVAMSKSSENENNAQNTGSALKSIQQQIVSINSMNTH
HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH
IASATEEQASVASQVVDNVVNMNASFEQTLQILSQVRNVSEGLVDFADELKNATSQFKL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFFNNISIFKKVIAIFILAVIIFALNLSISVISINKNRTTLNYMEQQVYQRVELANQNV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCH
FFIQRLDELYTQSVSFADEDLLTNAGTMYESLRKNLQQLDNVDPSQANQLNNLSAKLTRY
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
NDMTIKLAKGMLAGTIDMANIGQISQEKSQAYEAVLNEIQNYKQEKVLEFKQSIKEAGDR
CCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SEQSLWLTLSIGIALLIVMFIVTIAIARAISSSARNVAQSLSELADGKGDLSHKLNVSGS
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC
DELGQVSSNFNRFLGLLGDSIRRVVNVTDPLLASSHLLKQRMEDATHATQKQSHDASAVQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VSMEDMRHSVIEISQNARQAASAAQIAEKEAMQGMTVVQRTIDISQELNTGIQAASNSIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELARDTENVTSILNVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASKTAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCH
ATTEIRHVLQNLKTAAISSVNTMNVAMSKSSENENNAQNTGSALKSIQQQIVSINSMNTH
HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH
IASATEEQASVASQVVDNVVNMNASFEQTLQILSQVRNVSEGLVDFADELKNATSQFKL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2162464; 10952301 [H]