| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876310
Identifier: 160876310
GI number: 160876310
Start: 3773467
End: 3774081
Strand: Reverse
Name: 160876310
Synonym: Sbal195_3204
Alternate gene names: NA
Gene position: 3774081-3773467 (Counterclockwise)
Preceding gene: 160876311
Following gene: 160876309
Centisome position: 70.58
GC content: 43.25
Gene sequence:
>615_bases ATGTCGTCAGTTCGTAATCGCAGCCCAAATTTTGGTTTTTCATTTTTGAATTCAAGCTGCTTAAGTTTATTGGCGCTCAG TTTATTGGCCGCACCTCTAAAAGCATTAGAGGCGAAAACGCCAGATTTTGAAAACATTACTATCGAGCTGAATGATGCCG CCGATGTGACGCAGACTTTTCAGGAAGTAGGGCGCGGAGAAATGGATTGGCTGTGGTTTAGTTTGTATAAGGCGAGACTG ATGACGGTAAATGGCCGTTATCAACAGGGGCAATATCCTCTGCTGCTAGATATTGAATATTATCGAGATATAGAGTCTGA AGATCTGTTAGAAGCGACAAAGGATCAATGGCAGCATCTAGCGTTTGCTGAAAATGATATCCAGCGTTGGTTGAGTTTAT TAACCGCCACTTGGCCTGATGTGAAGCAGGGCGACCATTTAAGTTTTAAGGTTATGGATGGGCAAACGAGCCAGTTTTTC TTTAATCATCAACCACTCGACATTATCCACGATGCTAATTTTGCCGAGGCATTTTTAGCGATTTGGTTATCGAAAGACAC TAGCCGTCCGAGTTTGCGGGCGCAATTACTCGGAGAAAAACCATGCGATTGTTAA
Upstream 100 bases:
>100_bases TGTGTTTGGGCGTTAATTATTGAAATCTAGGAATTGAGTCCGTTTAAGTCATTTTTAGCCAATACGTGTTGTAAGACACC ATGCAGTCAAAGGGGATCCC
Downstream 100 bases:
>100_bases TACGACTTATCGGTCAAAAGTTATTGCTAGGCCTAATAATGATAGGTCTGCTATCGAGTTGCTCATCGGTGGATGTGACG GATTATAAAGATACTCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSSVRNRSPNFGFSFLNSSCLSLLALSLLAAPLKALEAKTPDFENITIELNDAADVTQTFQEVGRGEMDWLWFSLYKARL MTVNGRYQQGQYPLLLDIEYYRDIESEDLLEATKDQWQHLAFAENDIQRWLSLLTATWPDVKQGDHLSFKVMDGQTSQFF FNHQPLDIIHDANFAEAFLAIWLSKDTSRPSLRAQLLGEKPCDC
Sequences:
>Translated_204_residues MSSVRNRSPNFGFSFLNSSCLSLLALSLLAAPLKALEAKTPDFENITIELNDAADVTQTFQEVGRGEMDWLWFSLYKARL MTVNGRYQQGQYPLLLDIEYYRDIESEDLLEATKDQWQHLAFAENDIQRWLSLLTATWPDVKQGDHLSFKVMDGQTSQFF FNHQPLDIIHDANFAEAFLAIWLSKDTSRPSLRAQLLGEKPCDC >Mature_203_residues SSVRNRSPNFGFSFLNSSCLSLLALSLLAAPLKALEAKTPDFENITIELNDAADVTQTFQEVGRGEMDWLWFSLYKARLM TVNGRYQQGQYPLLLDIEYYRDIESEDLLEATKDQWQHLAFAENDIQRWLSLLTATWPDVKQGDHLSFKVMDGQTSQFFF NHQPLDIIHDANFAEAFLAIWLSKDTSRPSLRAQLLGEKPCDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23390; Mature: 23258
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVRNRSPNFGFSFLNSSCLSLLALSLLAAPLKALEAKTPDFENITIELNDAADVTQTF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHH QEVGRGEMDWLWFSLYKARLMTVNGRYQQGQYPLLLDIEYYRDIESEDLLEATKDQWQHL HHHCCCCHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHH AFAENDIQRWLSLLTATWPDVKQGDHLSFKVMDGQTSQFFFNHQPLDIIHDANFAEAFLA HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEECCCCCCEEECCCHHHHHHH IWLSKDTSRPSLRAQLLGEKPCDC HHHCCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure SSVRNRSPNFGFSFLNSSCLSLLALSLLAAPLKALEAKTPDFENITIELNDAADVTQTF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHH QEVGRGEMDWLWFSLYKARLMTVNGRYQQGQYPLLLDIEYYRDIESEDLLEATKDQWQHL HHHCCCCHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHH AFAENDIQRWLSLLTATWPDVKQGDHLSFKVMDGQTSQFFFNHQPLDIIHDANFAEAFLA HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEECCCCCCEEECCCHHHHHHH IWLSKDTSRPSLRAQLLGEKPCDC HHHCCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]