| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876309
Identifier: 160876309
GI number: 160876309
Start: 3772934
End: 3773479
Strand: Reverse
Name: 160876309
Synonym: Sbal195_3203
Alternate gene names: NA
Gene position: 3773479-3772934 (Counterclockwise)
Preceding gene: 160876310
Following gene: 160876308
Centisome position: 70.57
GC content: 42.49
Gene sequence:
>546_bases ATGCGATTGTTAATACGACTTATCGGTCAAAAGTTATTGCTAGGCCTAATAATGATAGGTCTGCTATCGAGTTGCTCATC GGTGGATGTGACGGATTATAAAGATACTCATCCTACACTGGTGTTGGAATCATTCTTTAATGGGCCATTAAAAGCGTCTG GAATAGTGCATGATTTTAGTGGCAAAGTGATCCGTAAATTCAATGTCACTATGGAAGCCAGTTGGCAGGGAAACGAGGGC GTCATCAATGAATGGTTTGTTTATGATGATGGCGAAACTCAAACTCGTGTGTGGCGCATTAAAGCGCTAGGGGAAGGGCG ATACTCGGGAACTGCAGGTGACATTATCGGCACCGCCGATGGTCAATCCAGTGGTAGTGCGCTACGTTGGAAATACGATA TGTTATTACCCGTGGATGGCGATGAATACCAAGTTCATTTCGACGATTGGATGTTCTTAGTGAATGACAATACCATTATA AATCAGAGCGATATTATTAAATTTGGCATCACAGTCGCCCAGGTGACTTTAGTAATCCAAAAATAA
Upstream 100 bases:
>100_bases TTATCCACGATGCTAATTTTGCCGAGGCATTTTTAGCGATTTGGTTATCGAAAGACACTAGCCGTCCGAGTTTGCGGGCG CAATTACTCGGAGAAAAACC
Downstream 100 bases:
>100_bases CATGAGCCAATTTTTGCTTTGCTTAGCTTAATTACATTTATCTCAGCCTGTCTTGGATTCACTAGGTCTATTAAGGCTTA CATGTTCATTAAGGCCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Protein; GABA Permease
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MRLLIRLIGQKLLLGLIMIGLLSSCSSVDVTDYKDTHPTLVLESFFNGPLKASGIVHDFSGKVIRKFNVTMEASWQGNEG VINEWFVYDDGETQTRVWRIKALGEGRYSGTAGDIIGTADGQSSGSALRWKYDMLLPVDGDEYQVHFDDWMFLVNDNTII NQSDIIKFGITVAQVTLVIQK
Sequences:
>Translated_181_residues MRLLIRLIGQKLLLGLIMIGLLSSCSSVDVTDYKDTHPTLVLESFFNGPLKASGIVHDFSGKVIRKFNVTMEASWQGNEG VINEWFVYDDGETQTRVWRIKALGEGRYSGTAGDIIGTADGQSSGSALRWKYDMLLPVDGDEYQVHFDDWMFLVNDNTII NQSDIIKFGITVAQVTLVIQK >Mature_181_residues MRLLIRLIGQKLLLGLIMIGLLSSCSSVDVTDYKDTHPTLVLESFFNGPLKASGIVHDFSGKVIRKFNVTMEASWQGNEG VINEWFVYDDGETQTRVWRIKALGEGRYSGTAGDIIGTADGQSSGSALRWKYDMLLPVDGDEYQVHFDDWMFLVNDNTII NQSDIIKFGITVAQVTLVIQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20208; Mature: 20208
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLIRLIGQKLLLGLIMIGLLSSCSSVDVTDYKDTHPTLVLESFFNGPLKASGIVHDFS CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCCCEEECCC GKVIRKFNVTMEASWQGNEGVINEWFVYDDGETQTRVWRIKALGEGRYSGTAGDIIGTAD CCEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECCC GQSSGSALRWKYDMLLPVDGDEYQVHFDDWMFLVNDNTIINQSDIIKFGITVAQVTLVIQ CCCCCCEEEEEEEEEEECCCCCEEEEECCEEEEEECCEEECCCCEEEECEEEEEEEEEEE K C >Mature Secondary Structure MRLLIRLIGQKLLLGLIMIGLLSSCSSVDVTDYKDTHPTLVLESFFNGPLKASGIVHDFS CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCCCEEECCC GKVIRKFNVTMEASWQGNEGVINEWFVYDDGETQTRVWRIKALGEGRYSGTAGDIIGTAD CCEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECCC GQSSGSALRWKYDMLLPVDGDEYQVHFDDWMFLVNDNTIINQSDIIKFGITVAQVTLVIQ CCCCCCEEEEEEEEEEECCCCCEEEEECCEEEEEECCEEECCCCEEEECEEEEEEEEEEE K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA