| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876270
Identifier: 160876270
GI number: 160876270
Start: 3737294
End: 3738697
Strand: Direct
Name: 160876270
Synonym: Sbal195_3164
Alternate gene names: NA
Gene position: 3737294-3738697 (Clockwise)
Preceding gene: 160876269
Following gene: 160876271
Centisome position: 69.89
GC content: 48.36
Gene sequence:
>1404_bases ATGCCCTGCTACGCAGAGTTTTCATTGGCACAAATCCCGCCGCTCACGAACAAAACGCCCATCACCTTAGTCGCAGAAAA GGGGTTTTGGACCGACTATTTAACTCAAGAAATGTTGCCTAAATTTACCGAAAAAACTGGCGTCAAGGTGCAAGTGATCA GCACCGAGCTAGACACAATGTTTAGCTTACAGACCCAAGATTTACTCCAAGGTTCGGGCAAATACGACTTGCTAACGATG GAAGCTGGCTGGGCAAAAGAATGGGCCGCCAATGGCTACACTGTGCCCTTAGTCGAACTCGCGAAACTGTACGATCCCGA TGGCGAAAAGGCCATGGAGAAATACCTAGAACCCTATTACCCATCGCTACTGAATATTTTATCCTACCATGGTGAAATCC ATGCGATTCCCTACAACAACTATGTGATGGGCAATCATTACCGAGCGGATCTCTTCGATAATAAAACCGAAAAAACACGC TTTCAGAGCCAGTTCGGCTACCCACTCGCGCCAGCAAAAACCTTAACCGAGTTACGGGATCAAGCCCAGTTCTTCACTCG TAAAGCGGGCGCTATGTTGGCGGATAAAATGTTGACCCACGACTTTTACGGCCTAGCGCTAATGTCGGGCGATAAGCCAC ATATTAACGATGAATTTTCCAGCATGATCTGGAGCTTAGGCGGCGCTTGGATGCAGCCAATTTATAACGACCAAAAACAG ATCAGTCATTTTGAAGTCCCCAGTATCAACTATGAGGCAATAGAAGCCGCAAAGCTGTACCGCGAATTAATGCCCTATGC CGTACCTGTTAACGAGCAATTTGCCTTCAATGAGGCCGCCAATGCAATCGCTACAGGCCAAGCGGCAATGTGGCCTTTTG CCTACAATAATTTGTGGCACAAATCTTTTAAAGTTGAACAAAATATTCCCGGCGCACGCCTTGCGGTGAGTCAAGTGCCC GGCGGTTATCCCTATAACGGCGCCTATGCTTTTGCCGTGAGCTACGACAGCAAAAATCCCCAAGCGGCCTATTGGCTCAT CAAATACATGGGCACCTATGAGGCGCAACACGCTTATGCCCTCGGCGGCGGTAATCCCTGTCGTATGGATGTCGTGACCG CCCCCGAATTTAAAAGTGAATCGTTAAGGACCATAGCGGGCGCATTCGAGGCAAGCCACATCGCTAATATGTTTTGGTCA ACGAAAGTGCTAGAACTTGGGCATTTTACCAGTACCGCCATGGGACAGATTTACCCTGAACTCAGCCATGCTTGCTATCG CGCTAGCCGCAGGCCCGCTGACAGCGAGGATATTTTCATTAAACTAAGTGCAGAGATAAAACACCTCCAAAATACCTATG GAGAGGTACCTGCGATTGACAAGAAAACCAATGACAAGCACTAA
Upstream 100 bases:
>100_bases AATAAATGATATTTATTCAGGGTTAACACGCAACATTAAGGTGTATTTTTTGTTAAAGCCGATCCGACTTATTTGCCTTT GTTTATGCGCCGTGTTTCTG
Downstream 100 bases:
>100_bases ACCGCTGAAAAGCCTAAAACAAAAAATAACCTTAGCCTTCTATATCATAGTGGGCATGGCGCTGTTTAATGGTGTCGTCG CCATACTGCTGTCACAGCAA
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MPCYAEFSLAQIPPLTNKTPITLVAEKGFWTDYLTQEMLPKFTEKTGVKVQVISTELDTMFSLQTQDLLQGSGKYDLLTM EAGWAKEWAANGYTVPLVELAKLYDPDGEKAMEKYLEPYYPSLLNILSYHGEIHAIPYNNYVMGNHYRADLFDNKTEKTR FQSQFGYPLAPAKTLTELRDQAQFFTRKAGAMLADKMLTHDFYGLALMSGDKPHINDEFSSMIWSLGGAWMQPIYNDQKQ ISHFEVPSINYEAIEAAKLYRELMPYAVPVNEQFAFNEAANAIATGQAAMWPFAYNNLWHKSFKVEQNIPGARLAVSQVP GGYPYNGAYAFAVSYDSKNPQAAYWLIKYMGTYEAQHAYALGGGNPCRMDVVTAPEFKSESLRTIAGAFEASHIANMFWS TKVLELGHFTSTAMGQIYPELSHACYRASRRPADSEDIFIKLSAEIKHLQNTYGEVPAIDKKTNDKH
Sequences:
>Translated_467_residues MPCYAEFSLAQIPPLTNKTPITLVAEKGFWTDYLTQEMLPKFTEKTGVKVQVISTELDTMFSLQTQDLLQGSGKYDLLTM EAGWAKEWAANGYTVPLVELAKLYDPDGEKAMEKYLEPYYPSLLNILSYHGEIHAIPYNNYVMGNHYRADLFDNKTEKTR FQSQFGYPLAPAKTLTELRDQAQFFTRKAGAMLADKMLTHDFYGLALMSGDKPHINDEFSSMIWSLGGAWMQPIYNDQKQ ISHFEVPSINYEAIEAAKLYRELMPYAVPVNEQFAFNEAANAIATGQAAMWPFAYNNLWHKSFKVEQNIPGARLAVSQVP GGYPYNGAYAFAVSYDSKNPQAAYWLIKYMGTYEAQHAYALGGGNPCRMDVVTAPEFKSESLRTIAGAFEASHIANMFWS TKVLELGHFTSTAMGQIYPELSHACYRASRRPADSEDIFIKLSAEIKHLQNTYGEVPAIDKKTNDKH >Mature_466_residues PCYAEFSLAQIPPLTNKTPITLVAEKGFWTDYLTQEMLPKFTEKTGVKVQVISTELDTMFSLQTQDLLQGSGKYDLLTME AGWAKEWAANGYTVPLVELAKLYDPDGEKAMEKYLEPYYPSLLNILSYHGEIHAIPYNNYVMGNHYRADLFDNKTEKTRF QSQFGYPLAPAKTLTELRDQAQFFTRKAGAMLADKMLTHDFYGLALMSGDKPHINDEFSSMIWSLGGAWMQPIYNDQKQI SHFEVPSINYEAIEAAKLYRELMPYAVPVNEQFAFNEAANAIATGQAAMWPFAYNNLWHKSFKVEQNIPGARLAVSQVPG GYPYNGAYAFAVSYDSKNPQAAYWLIKYMGTYEAQHAYALGGGNPCRMDVVTAPEFKSESLRTIAGAFEASHIANMFWST KVLELGHFTSTAMGQIYPELSHACYRASRRPADSEDIFIKLSAEIKHLQNTYGEVPAIDKKTNDKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52687; Mature: 52556
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCYAEFSLAQIPPLTNKTPITLVAEKGFWTDYLTQEMLPKFTEKTGVKVQVISTELDTM CCCCCCCCHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECHHHH FSLQTQDLLQGSGKYDLLTMEAGWAKEWAANGYTVPLVELAKLYDPDGEKAMEKYLEPYY HHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHCCHH PSLLNILSYHGEIHAIPYNNYVMGNHYRADLFDNKTEKTRFQSQFGYPLAPAKTLTELRD HHHHHHHHHCCCEEEEECCCEEECCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH QAQFFTRKAGAMLADKMLTHDFYGLALMSGDKPHINDEFSSMIWSLGGAWMQPIYNDQKQ HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHCCHHH ISHFEVPSINYEAIEAAKLYRELMPYAVPVNEQFAFNEAANAIATGQAAMWPFAYNNLWH HCEECCCCCCHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHCCCHHCCCHHHHHHHH KSFKVEQNIPGARLAVSQVPGGYPYNGAYAFAVSYDSKNPQAAYWLIKYMGTYEAQHAYA HCEEECCCCCCCEEEHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEE LGGGNPCRMDVVTAPEFKSESLRTIAGAFEASHIANMFWSTKVLELGHFTSTAMGQIYPE ECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LSHACYRASRRPADSEDIFIKLSAEIKHLQNTYGEVPAIDKKTNDKH HHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PCYAEFSLAQIPPLTNKTPITLVAEKGFWTDYLTQEMLPKFTEKTGVKVQVISTELDTM CCCCCCCHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECHHHH FSLQTQDLLQGSGKYDLLTMEAGWAKEWAANGYTVPLVELAKLYDPDGEKAMEKYLEPYY HHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHCCHH PSLLNILSYHGEIHAIPYNNYVMGNHYRADLFDNKTEKTRFQSQFGYPLAPAKTLTELRD HHHHHHHHHCCCEEEEECCCEEECCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH QAQFFTRKAGAMLADKMLTHDFYGLALMSGDKPHINDEFSSMIWSLGGAWMQPIYNDQKQ HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHCCHHH ISHFEVPSINYEAIEAAKLYRELMPYAVPVNEQFAFNEAANAIATGQAAMWPFAYNNLWH HCEECCCCCCHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHCCCHHCCCHHHHHHHH KSFKVEQNIPGARLAVSQVPGGYPYNGAYAFAVSYDSKNPQAAYWLIKYMGTYEAQHAYA HCEEECCCCCCCEEEHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEE LGGGNPCRMDVVTAPEFKSESLRTIAGAFEASHIANMFWSTKVLELGHFTSTAMGQIYPE ECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LSHACYRASRRPADSEDIFIKLSAEIKHLQNTYGEVPAIDKKTNDKH HHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA