| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876269
Identifier: 160876269
GI number: 160876269
Start: 3736577
End: 3737044
Strand: Direct
Name: 160876269
Synonym: Sbal195_3163
Alternate gene names: NA
Gene position: 3736577-3737044 (Clockwise)
Preceding gene: 160876268
Following gene: 160876270
Centisome position: 69.88
GC content: 46.58
Gene sequence:
>468_bases ATGGGACTCAGCGACCTCAAGAAAAACGCTATGCCATCTAGCAGCATACAACCGTCGCTTTCGTTAGACGAATTTATTGA GGCAGCAAACTTATATGCCATGGGACAAAGCCTAAATAAGACAAAAAGCAGTCATTTCGCTTTTGAAGCGGATGCAACAA ACGCTAACACCGCTGACTCAAAGGTAGCTAACATAACGACCGACATCGGGCTAAGTCATTCCAATGTGCTGCTCTTGCAC AAGCAGAGCTTAGGGACTGAAGTCTTATCGCCAGCAAAAGTAGAGGCCACAACTCACTATCGCAAGGCAACCTTTTCACT CAGCGAAGCGGCTATTAGCCAGCTCGCCACCTTGTCGGAAGAAAGCACGCTCTCCAAATCGAAACTGCTCCGATTCTTGA TTGAACAACATTACGAACTACCCATTACCCTGAGGCAATTACGAGAACAACAGCTCCAAAACCGTTAA
Upstream 100 bases:
>100_bases GGTCAGATGCACAATGGTTTGACAAATAATGGTTTGCTCAATAATGGTTTGCTCCATCAAACTCAACCCACTCACCTTAA CACTCAAAAAAGGGGGCAAA
Downstream 100 bases:
>100_bases CGCTTCGCAATACTCCCACCCTTTTCCGGTAACTCAGCTAAGCTCGGGTTATCGGCTTTTTTACTTAAGAACAAGCACCA AGATAAAAACCACAATAAAA
Product: CopG family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MGLSDLKKNAMPSSSIQPSLSLDEFIEAANLYAMGQSLNKTKSSHFAFEADATNANTADSKVANITTDIGLSHSNVLLLH KQSLGTEVLSPAKVEATTHYRKATFSLSEAAISQLATLSEESTLSKSKLLRFLIEQHYELPITLRQLREQQLQNR
Sequences:
>Translated_155_residues MGLSDLKKNAMPSSSIQPSLSLDEFIEAANLYAMGQSLNKTKSSHFAFEADATNANTADSKVANITTDIGLSHSNVLLLH KQSLGTEVLSPAKVEATTHYRKATFSLSEAAISQLATLSEESTLSKSKLLRFLIEQHYELPITLRQLREQQLQNR >Mature_154_residues GLSDLKKNAMPSSSIQPSLSLDEFIEAANLYAMGQSLNKTKSSHFAFEADATNANTADSKVANITTDIGLSHSNVLLLHK QSLGTEVLSPAKVEATTHYRKATFSLSEAAISQLATLSEESTLSKSKLLRFLIEQHYELPITLRQLREQQLQNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17034; Mature: 16903
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSDLKKNAMPSSSIQPSLSLDEFIEAANLYAMGQSLNKTKSSHFAFEADATNANTADS CCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCH KVANITTDIGLSHSNVLLLHKQSLGTEVLSPAKVEATTHYRKATFSLSEAAISQLATLSE HHHHHHHHCCCCCCCEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESTLSKSKLLRFLIEQHYELPITLRQLREQQLQNR HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure GLSDLKKNAMPSSSIQPSLSLDEFIEAANLYAMGQSLNKTKSSHFAFEADATNANTADS CHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCH KVANITTDIGLSHSNVLLLHKQSLGTEVLSPAKVEATTHYRKATFSLSEAAISQLATLSE HHHHHHHHCCCCCCCEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESTLSKSKLLRFLIEQHYELPITLRQLREQQLQNR HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA