| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876235
Identifier: 160876235
GI number: 160876235
Start: 3693007
End: 3693951
Strand: Reverse
Name: 160876235
Synonym: Sbal195_3129
Alternate gene names: NA
Gene position: 3693951-3693007 (Counterclockwise)
Preceding gene: 160876236
Following gene: 160876232
Centisome position: 69.08
GC content: 48.25
Gene sequence:
>945_bases GTGGCTAATCTAGAACTCTCACCATCGAGCGCAAAACTGCGCCTGCTGAAAAGCGCTGTATTACTGTCGCCGTTAATGAG CTTTGCTGCTATTGCAGCGGATAAACCTTCGCAGGAATACAAGCCTTTTAGATTAAGTGTCGCGCAGATCAGCACCCAGA GTGCCGAGGTTGCCAATGGTAATACTGAGCTACAAAGGGACAGTTTATTACTGAGTGCAGGGATGAATGTTCCGTTAAAT CAGCAATGGTCTTTGGGCTTTCGTGTGGGTTACGACAGGCTGGACTACGACTGGCGCAATATCACGCTCACAGGCGCTAA CAATGTCGCACCGCTTTTTGGTACCGACGGGCAGAATTGGGATCATATCAATCGTTACCGTGCCGGAGTGTCGTTAAATT ATCGCATGGATAAACATTGGGCCTTCTTTTTAGCGCCGCAGATCCAATATGCCTACGCCGACACTGCATCGGCCAGCGAA GCCCAGAGTTACGGTATTGTGGCGTCTGCCATGTATGCATTTGATTCAGGGAATATGATTGGCTTTGGCGTCGCGTATCT CAATGATATCGATGAAGTTCGCACTGTGCCATATCTCGCCATGCGCTGGCAGATAGATGAACATTGGGCACTCGCCAATC CTTTCCAAGCTGGTTTTAGTGGTCCTGCAGGATTAGAGCTGAGTTATCGATTTAATTCCGATTGGAATGTCGGCTTTGGT AGTTCGCGTCGTACTGAGCGATTCCTTATCGAAGATGATGACACTGTAGTAGAAACGAACGAATGGGTGAGTTATTTACG TGGCGGTTGGCAAGCAACCCCAGCATTAACAGTGAATCTTTACGCCGGTTATTACTTTGATGGTGAGTTAGAAGTGACCG ACCAAGCCGCACTTGAAATGGATAGCCAAGGCGCTGCGGCCTTGGATATCGAATTCAAATTCTAA
Upstream 100 bases:
>100_bases TATCATTTTGTATCGCAATATTGAAAGCATGAACCTTTTAGCTTGATAGCGCGTATTATGCGCAAAAATCTGTTAATCAT TTTAAATGCAAGGAGCTGAC
Downstream 100 bases:
>100_bases CGTTAATGTCAGTTATTTGCCCAGCATGGCCTCTTTGAGGCTTTTCTGGGCTGGCTTATCACCTAGCCAAATTTTTAACA GTGCTTGACGGAACATTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MANLELSPSSAKLRLLKSAVLLSPLMSFAAIAADKPSQEYKPFRLSVAQISTQSAEVANGNTELQRDSLLLSAGMNVPLN QQWSLGFRVGYDRLDYDWRNITLTGANNVAPLFGTDGQNWDHINRYRAGVSLNYRMDKHWAFFLAPQIQYAYADTASASE AQSYGIVASAMYAFDSGNMIGFGVAYLNDIDEVRTVPYLAMRWQIDEHWALANPFQAGFSGPAGLELSYRFNSDWNVGFG SSRRTERFLIEDDDTVVETNEWVSYLRGGWQATPALTVNLYAGYYFDGELEVTDQAALEMDSQGAAALDIEFKF
Sequences:
>Translated_314_residues MANLELSPSSAKLRLLKSAVLLSPLMSFAAIAADKPSQEYKPFRLSVAQISTQSAEVANGNTELQRDSLLLSAGMNVPLN QQWSLGFRVGYDRLDYDWRNITLTGANNVAPLFGTDGQNWDHINRYRAGVSLNYRMDKHWAFFLAPQIQYAYADTASASE AQSYGIVASAMYAFDSGNMIGFGVAYLNDIDEVRTVPYLAMRWQIDEHWALANPFQAGFSGPAGLELSYRFNSDWNVGFG SSRRTERFLIEDDDTVVETNEWVSYLRGGWQATPALTVNLYAGYYFDGELEVTDQAALEMDSQGAAALDIEFKF >Mature_313_residues ANLELSPSSAKLRLLKSAVLLSPLMSFAAIAADKPSQEYKPFRLSVAQISTQSAEVANGNTELQRDSLLLSAGMNVPLNQ QWSLGFRVGYDRLDYDWRNITLTGANNVAPLFGTDGQNWDHINRYRAGVSLNYRMDKHWAFFLAPQIQYAYADTASASEA QSYGIVASAMYAFDSGNMIGFGVAYLNDIDEVRTVPYLAMRWQIDEHWALANPFQAGFSGPAGLELSYRFNSDWNVGFGS SRRTERFLIEDDDTVVETNEWVSYLRGGWQATPALTVNLYAGYYFDGELEVTDQAALEMDSQGAAALDIEFKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35001; Mature: 34870
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLELSPSSAKLRLLKSAVLLSPLMSFAAIAADKPSQEYKPFRLSVAQISTQSAEVANG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHCCCCCCEECCC NTELQRDSLLLSAGMNVPLNQQWSLGFRVGYDRLDYDWRNITLTGANNVAPLFGTDGQNW CCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEECCCCCCC DHINRYRAGVSLNYRMDKHWAFFLAPQIQYAYADTASASEAQSYGIVASAMYAFDSGNMI HHHHHHHCCEEEEEEECCCEEEEEECEEEEEECCCCCCCHHHHCCCEEEEEEEECCCCEE GFGVAYLNDIDEVRTVPYLAMRWQIDEHWALANPFQAGFSGPAGLELSYRFNSDWNVGFG EEEHHHHCCHHHHHCCCEEEEEEEECCCEEECCCHHCCCCCCCCCEEEEEECCCCCCCCC SSRRTERFLIEDDDTVVETNEWVSYLRGGWQATPALTVNLYAGYYFDGELEVTDQAALEM CCCCCEEEEEECCCCEEECHHHHHHHHCCCEECCEEEEEEEEEEEECCEEEECCHHHEEE DSQGAAALDIEFKF CCCCCEEEEEEEEC >Mature Secondary Structure ANLELSPSSAKLRLLKSAVLLSPLMSFAAIAADKPSQEYKPFRLSVAQISTQSAEVANG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHCCCCCCEECCC NTELQRDSLLLSAGMNVPLNQQWSLGFRVGYDRLDYDWRNITLTGANNVAPLFGTDGQNW CCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEECCCCCCC DHINRYRAGVSLNYRMDKHWAFFLAPQIQYAYADTASASEAQSYGIVASAMYAFDSGNMI HHHHHHHCCEEEEEEECCCEEEEEECEEEEEECCCCCCCHHHHCCCEEEEEEEECCCCEE GFGVAYLNDIDEVRTVPYLAMRWQIDEHWALANPFQAGFSGPAGLELSYRFNSDWNVGFG EEEHHHHCCHHHHHCCCEEEEEEEECCCEEECCCHHCCCCCCCCCEEEEEECCCCCCCCC SSRRTERFLIEDDDTVVETNEWVSYLRGGWQATPALTVNLYAGYYFDGELEVTDQAALEM CCCCCEEEEEECCCCEEECHHHHHHHHCCCEECCEEEEEEEEEEEECCEEEECCHHHEEE DSQGAAALDIEFKF CCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA