| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is wzxE [H]
Identifier: 160876134
GI number: 160876134
Start: 3594620
End: 3595870
Strand: Reverse
Name: wzxE [H]
Synonym: Sbal195_3025
Alternate gene names: 160876134
Gene position: 3595870-3594620 (Counterclockwise)
Preceding gene: 160876135
Following gene: 160876133
Centisome position: 67.25
GC content: 46.76
Gene sequence:
>1251_bases ATGAAGCGTTTGCTCAAAGTCACCGCCATGACCGGGTTATTAACCTTATTGCGCATGGCGATGGGATTTGTGATTGCCAA GGTAGTGGCCATCTATACCGGCCCCACTGGTTTGGCAATGTTAGGCCAAGTTCAAAGCTTGGTCGGCAGCTTGAACGGTA TTATTAATGCGCCTGCTGGTAGCGGTGTGGTGCGCTTTACTGCTGAAAATAAAGAACAAGGTTTTGACGCTTGCGCACCT TGGTGGCGCGCAGCTTTACAATGGGTACTTATTATTTCAGCGATTGCCATTCCGCTGGGCTTGTTATTCGCCAAGCCGCT GGCAATCGGTTTATTTCAAGATGCTAGCTTAGCTTGGGTGATAGTGGTCACTGTTAGCGTATTACCCTTTGCCGCCATCG GCACCTTGTGTAATTCGGTGATCAACGGCCAACAGTTATATCGCCGTTATGTCGGCCTAGGTATGCTCTCGGCGCTTATT TCGGGCAGCGTGATGCTGAGCATGATCGCTTGGCAAAATATTGAGGGCGCACTATTAGCGGCAGCCGTGCAAGCGGCCTT GATTGGCGTGGTGATGTTAATTGCCAACCTGCGCCAACCTTGGTTTAAGCTGCGTTACTGGTGGGGCGCGGTGGAGCCAA AAGCACGCAAAGACATTGGCAAATATATGCTAATGGCGATCACCAGTGCGTTAACCGTGCCGGTCTCATTAATTTTGGTG CGCAATATTTTAATTGACCAAGTTGGTTGGGATGCAACCGGCCAATGGCAAGCGGTGTATAAAATCTCTGAAGTCTATTT AGGGGTGATCACCATGGCGCTCGGCACCTATTATTTGCCGCGCCTGTCATCATTAACCGGTGTCGATGCTATTGTCAGCG AAATCCACAAAACTGCACGTGTTATTATCCCAATTGTTGCCACTATGGCACTCGCGGTTTACTTATTGCGTGATGTGGCG ATTTCATTATTATTTACCGAAGCATTTCGCAGCGCTCGTGAATTATTTGCGATTCAATTAACCGGTGATGTGATAAAAAT TGCTAGTTGGTTATACGCCTACCCAATGCTCTCACGTGGTGCCACTAAATGGTTTATGGGCACTGAAATTTTATTCTCGC TTTCATTTGTCGCCTTAACCTATCTGTTTGTTGCTAATATGGGTTTAAAAGGCGCAACTGTTGCTTATTTGGTCAATTAT TCGGTATGCTTTTTAAGTATCTACTTAAATGTAAAAAGATTCGCCCGTTAA
Upstream 100 bases:
>100_bases CTGAGTTAATTCATCAGCAAGTACTTTCTATTCCGCTTGATCCTACCATGAGTGATGCGGCGGTTAAGCAAGTTATTGCC GCAATGAATGAGTTTGCTGG
Downstream 100 bases:
>100_bases TCACTATTAAACGTCGCACCTTGATGTTCAATATTTTATATAAACTCAAGCTGCTACCCAATGTGATTTGCGTTGGTAAA GTAGGTGTTATTCAGTCCTT
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MKRLLKVTAMTGLLTLLRMAMGFVIAKVVAIYTGPTGLAMLGQVQSLVGSLNGIINAPAGSGVVRFTAENKEQGFDACAP WWRAALQWVLIISAIAIPLGLLFAKPLAIGLFQDASLAWVIVVTVSVLPFAAIGTLCNSVINGQQLYRRYVGLGMLSALI SGSVMLSMIAWQNIEGALLAAAVQAALIGVVMLIANLRQPWFKLRYWWGAVEPKARKDIGKYMLMAITSALTVPVSLILV RNILIDQVGWDATGQWQAVYKISEVYLGVITMALGTYYLPRLSSLTGVDAIVSEIHKTARVIIPIVATMALAVYLLRDVA ISLLFTEAFRSARELFAIQLTGDVIKIASWLYAYPMLSRGATKWFMGTEILFSLSFVALTYLFVANMGLKGATVAYLVNY SVCFLSIYLNVKRFAR
Sequences:
>Translated_416_residues MKRLLKVTAMTGLLTLLRMAMGFVIAKVVAIYTGPTGLAMLGQVQSLVGSLNGIINAPAGSGVVRFTAENKEQGFDACAP WWRAALQWVLIISAIAIPLGLLFAKPLAIGLFQDASLAWVIVVTVSVLPFAAIGTLCNSVINGQQLYRRYVGLGMLSALI SGSVMLSMIAWQNIEGALLAAAVQAALIGVVMLIANLRQPWFKLRYWWGAVEPKARKDIGKYMLMAITSALTVPVSLILV RNILIDQVGWDATGQWQAVYKISEVYLGVITMALGTYYLPRLSSLTGVDAIVSEIHKTARVIIPIVATMALAVYLLRDVA ISLLFTEAFRSARELFAIQLTGDVIKIASWLYAYPMLSRGATKWFMGTEILFSLSFVALTYLFVANMGLKGATVAYLVNY SVCFLSIYLNVKRFAR >Mature_416_residues MKRLLKVTAMTGLLTLLRMAMGFVIAKVVAIYTGPTGLAMLGQVQSLVGSLNGIINAPAGSGVVRFTAENKEQGFDACAP WWRAALQWVLIISAIAIPLGLLFAKPLAIGLFQDASLAWVIVVTVSVLPFAAIGTLCNSVINGQQLYRRYVGLGMLSALI SGSVMLSMIAWQNIEGALLAAAVQAALIGVVMLIANLRQPWFKLRYWWGAVEPKARKDIGKYMLMAITSALTVPVSLILV RNILIDQVGWDATGQWQAVYKISEVYLGVITMALGTYYLPRLSSLTGVDAIVSEIHKTARVIIPIVATMALAVYLLRDVA ISLLFTEAFRSARELFAIQLTGDVIKIASWLYAYPMLSRGATKWFMGTEILFSLSFVALTYLFVANMGLKGATVAYLVNY SVCFLSIYLNVKRFAR
Specific function: Synthesis of enterobacterial common antigen (ECA). [C]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790227, Length=410, Percent_Identity=30, Blast_Score=149, Evalue=5e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 45321; Mature: 45321
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLKVTAMTGLLTLLRMAMGFVIAKVVAIYTGPTGLAMLGQVQSLVGSLNGIINAPAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEECCCC SGVVRFTAENKEQGFDACAPWWRAALQWVLIISAIAIPLGLLFAKPLAIGLFQDASLAWV CCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH IVVTVSVLPFAAIGTLCNSVINGQQLYRRYVGLGMLSALISGSVMLSMIAWQNIEGALLA HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AAVQAALIGVVMLIANLRQPWFKLRYWWGAVEPKARKDIGKYMLMAITSALTVPVSLILV HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RNILIDQVGWDATGQWQAVYKISEVYLGVITMALGTYYLPRLSSLTGVDAIVSEIHKTAR HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VIIPIVATMALAVYLLRDVAISLLFTEAFRSARELFAIQLTGDVIKIASWLYAYPMLSRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHCC ATKWFMGTEILFSLSFVALTYLFVANMGLKGATVAYLVNYSVCFLSIYLNVKRFAR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRLLKVTAMTGLLTLLRMAMGFVIAKVVAIYTGPTGLAMLGQVQSLVGSLNGIINAPAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEECCCC SGVVRFTAENKEQGFDACAPWWRAALQWVLIISAIAIPLGLLFAKPLAIGLFQDASLAWV CCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH IVVTVSVLPFAAIGTLCNSVINGQQLYRRYVGLGMLSALISGSVMLSMIAWQNIEGALLA HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AAVQAALIGVVMLIANLRQPWFKLRYWWGAVEPKARKDIGKYMLMAITSALTVPVSLILV HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RNILIDQVGWDATGQWQAVYKISEVYLGVITMALGTYYLPRLSSLTGVDAIVSEIHKTAR HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VIIPIVATMALAVYLLRDVAISLLFTEAFRSARELFAIQLTGDVIKIASWLYAYPMLSRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHCC ATKWFMGTEILFSLSFVALTYLFVANMGLKGATVAYLVNYSVCFLSIYLNVKRFAR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]