| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is nodL [H]
Identifier: 160876133
GI number: 160876133
Start: 3594060
End: 3594596
Strand: Reverse
Name: nodL [H]
Synonym: Sbal195_3024
Alternate gene names: 160876133
Gene position: 3594596-3594060 (Counterclockwise)
Preceding gene: 160876134
Following gene: 160876132
Centisome position: 67.22
GC content: 40.04
Gene sequence:
>537_bases ATGTTCAATATTTTATATAAACTCAAGCTGCTACCCAATGTGATTTGCGTTGGTAAAGTAGGTGTTATTCAGTCCTTGAA GCTGGAAGGTAAGGGTAAAATAACTTTAGATGATGGTTGTGTGTTGGGAGTATATCCATCACCTAGTTTATATCATGGAG AGTTTTACCTTGAAGCACGCTCTAGCACTGCGGAAATTACAATCGGCAAACGGGTTTATATTAATAACAACGCCATTATC ATTGCTGATAAAACAGCGATAGCCATTGGTGATGACACTTTGATCGGCCCCAATTTCATCTGTTTTGATAGTAACTTTCA CTCGCTGCACCCGGCTAAGCGGTTAAGCAGTGATTACCGCTGCAAACCCGTAAACATTGGCCGCAATGTATTTATCGGCG CTAACGTGACCATTTTGCAAGGTGTAAGCATTGGTGATAACAGCGTGATTGGCACTGGTAGTGTTATTTCGCAAAATATC CCAGCGAATGTGATTGTAAAAATAGGAAAGGCATTGGAAATTTTTGATTTGAAATGA
Upstream 100 bases:
>100_bases CAACTGTTGCTTATTTGGTCAATTATTCGGTATGCTTTTTAAGTATCTACTTAAATGTAAAAAGATTCGCCCGTTAATCA CTATTAAACGTCGCACCTTG
Downstream 100 bases:
>100_bases GATGTACATGAACACAATATCTAATAAACAAATCGTCACAGTAGCAGTTATTACCTATCACTCCGCTGCTACAGTACTGG AAACCCTTGATAGCATAGTC
Product: hexapaptide repeat-containing transferase
Products: CoA; O-acetylcarnitine
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MFNILYKLKLLPNVICVGKVGVIQSLKLEGKGKITLDDGCVLGVYPSPSLYHGEFYLEARSSTAEITIGKRVYINNNAII IADKTAIAIGDDTLIGPNFICFDSNFHSLHPAKRLSSDYRCKPVNIGRNVFIGANVTILQGVSIGDNSVIGTGSVISQNI PANVIVKIGKALEIFDLK
Sequences:
>Translated_178_residues MFNILYKLKLLPNVICVGKVGVIQSLKLEGKGKITLDDGCVLGVYPSPSLYHGEFYLEARSSTAEITIGKRVYINNNAII IADKTAIAIGDDTLIGPNFICFDSNFHSLHPAKRLSSDYRCKPVNIGRNVFIGANVTILQGVSIGDNSVIGTGSVISQNI PANVIVKIGKALEIFDLK >Mature_178_residues MFNILYKLKLLPNVICVGKVGVIQSLKLEGKGKITLDDGCVLGVYPSPSLYHGEFYLEARSSTAEITIGKRVYINNNAII IADKTAIAIGDDTLIGPNFICFDSNFHSLHPAKRLSSDYRCKPVNIGRNVFIGANVTILQGVSIGDNSVIGTGSVISQNI PANVIVKIGKALEIFDLK
Specific function: Acetyltransferase implicated in the O-acetylation of Nod factors [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1786537, Length=105, Percent_Identity=42.8571428571429, Blast_Score=80, Evalue=5e-17, Organism=Escherichia coli, GI1786664, Length=118, Percent_Identity=33.8983050847458, Blast_Score=65, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322243, Length=111, Percent_Identity=40.5405405405405, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: 2.3.1.7
Molecular weight: Translated: 19193; Mature: 19193
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNILYKLKLLPNVICVGKVGVIQSLKLEGKGKITLDDGCVLGVYPSPSLYHGEFYLEAR CCEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEECCCEEEEECCCCCEEEEEEEEEEC SSTAEITIGKRVYINNNAIIIADKTAIAIGDDTLIGPNFICFDSNFHSLHPAKRLSSDYR CCEEEEEECCEEEECCCEEEEECCEEEEECCCCEECCEEEEEECCCCCCCCHHHCCCCCC CKPVNIGRNVFIGANVTILQGVSIGDNSVIGTGSVISQNIPANVIVKIGKALEIFDLK EEEEECCCEEEEECCEEEEEEEECCCCCEEECCCCEECCCCCEEEEEECCEEEEEECC >Mature Secondary Structure MFNILYKLKLLPNVICVGKVGVIQSLKLEGKGKITLDDGCVLGVYPSPSLYHGEFYLEAR CCEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEECCCEEEEECCCCCEEEEEEEEEEC SSTAEITIGKRVYINNNAIIIADKTAIAIGDDTLIGPNFICFDSNFHSLHPAKRLSSDYR CCEEEEEECCEEEECCCEEEEECCEEEEECCCCEECCEEEEEECCCCCCCCHHHCCCCCC CKPVNIGRNVFIGANVTILQGVSIGDNSVIGTGSVISQNIPANVIVKIGKALEIFDLK EEEEECCCEEEEECCEEEEEEEECCCCCEEECCCCEECCCCCEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acetyl-CoA; carnitine
Specific reaction: acetyl-CoA + carnitine = CoA + O-acetylcarnitine
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3132583; 2562395; 2615659 [H]