| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876130
Identifier: 160876130
GI number: 160876130
Start: 3590993
End: 3591745
Strand: Reverse
Name: 160876130
Synonym: Sbal195_3021
Alternate gene names: NA
Gene position: 3591745-3590993 (Counterclockwise)
Preceding gene: 160876131
Following gene: 160876129
Centisome position: 67.17
GC content: 31.34
Gene sequence:
>753_bases ATGTTAACCATTGCAATATCTACCTTTAATAAAAGGATTGATTTTTTAAATGATTATTGTTTTGATGATAGAGTTTTTTA TCTAATAAATTGGCAGTCACCTATAAATTATAATTTTAAATTACCTGATAATGTTAAACTTATACAATTAAATACGGTTG GTGTTGCGTGTAGCCGAAATGCAGCAATAGATTTTTGTCAAACTCCATGGATATGGTTTATGGATGATGATGTGGTAATA CCTAATGATTCTATATCACAAGTCTTAGGATTAATTCATAGTGCTAATCAAAATAATGTTTTTATCTCAGGGGTTAAGTC CCCCGAAGGTTTAGATATTAAAAGCTATAATTTATCATGCAGCGATAATGTAAGGTCTATTTTAAGTGTAGGTACAATTC AAATTATTGCAAATGCTACTGCAATTAAAAATGCCAAGGTGCAATTTCCTACAAATATGGGGGCGGGTACTGAAAATAAT CTATGTGATGAACCTGTTTTTCTACATCGTTTATCAAAAACGATCAAAAACCTTAAGTTTGTATTTCCATCAGGTTTATA TGTCATTCATCCTTTGGAACGTTCTGGCAGCGTTTACTCCACAAAAGGAAGTGTAAGATCCCGGGCGATGCTTTTTAGGG AAATTTATGGTTTACCTTTGTGTGTATTTGCCAGCATTTATTTTTTATGTAGGCATAGGAAACAAATTGGTAAATTTTGG ATCTATCTTTTTTCTTTTAAAAGAGCAAGTTAA
Upstream 100 bases:
>100_bases GGTTATATTTCTTTCTGTATATGGATATGCATTTAGAATGGCCGGTTTGAAATCTAATTCATGTACTATGAAATGACACT TTTATATTGGGAGTGTTTTT
Downstream 100 bases:
>100_bases GATTAGATATTCATTATGATATTAGCCTCCATCATCATGCCCTCTTATAACTCCGCTGCCACAATTGTTAGCAGTATTAA GAGCATACAACAGCAAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MLTIAISTFNKRIDFLNDYCFDDRVFYLINWQSPINYNFKLPDNVKLIQLNTVGVACSRNAAIDFCQTPWIWFMDDDVVI PNDSISQVLGLIHSANQNNVFISGVKSPEGLDIKSYNLSCSDNVRSILSVGTIQIIANATAIKNAKVQFPTNMGAGTENN LCDEPVFLHRLSKTIKNLKFVFPSGLYVIHPLERSGSVYSTKGSVRSRAMLFREIYGLPLCVFASIYFLCRHRKQIGKFW IYLFSFKRAS
Sequences:
>Translated_250_residues MLTIAISTFNKRIDFLNDYCFDDRVFYLINWQSPINYNFKLPDNVKLIQLNTVGVACSRNAAIDFCQTPWIWFMDDDVVI PNDSISQVLGLIHSANQNNVFISGVKSPEGLDIKSYNLSCSDNVRSILSVGTIQIIANATAIKNAKVQFPTNMGAGTENN LCDEPVFLHRLSKTIKNLKFVFPSGLYVIHPLERSGSVYSTKGSVRSRAMLFREIYGLPLCVFASIYFLCRHRKQIGKFW IYLFSFKRAS >Mature_250_residues MLTIAISTFNKRIDFLNDYCFDDRVFYLINWQSPINYNFKLPDNVKLIQLNTVGVACSRNAAIDFCQTPWIWFMDDDVVI PNDSISQVLGLIHSANQNNVFISGVKSPEGLDIKSYNLSCSDNVRSILSVGTIQIIANATAIKNAKVQFPTNMGAGTENN LCDEPVFLHRLSKTIKNLKFVFPSGLYVIHPLERSGSVYSTKGSVRSRAMLFREIYGLPLCVFASIYFLCRHRKQIGKFW IYLFSFKRAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28377; Mature: 28377
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTIAISTFNKRIDFLNDYCFDDRVFYLINWQSPINYNFKLPDNVKLIQLNTVGVACSRN CEEEEEECHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCCEEEEEEEEEEEEECCC AAIDFCQTPWIWFMDDDVVIPNDSISQVLGLIHSANQNNVFISGVKSPEGLDIKSYNLSC CCEEEECCCEEEEECCCEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCC SDNVRSILSVGTIQIIANATAIKNAKVQFPTNMGAGTENNLCDEPVFLHRLSKTIKNLKF CHHHHHHHHHCEEEEEEEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHEEE VFPSGLYVIHPLERSGSVYSTKGSVRSRAMLFREIYGLPLCVFASIYFLCRHRKQIGKFW ECCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHE IYLFSFKRAS EEEEEEECCC >Mature Secondary Structure MLTIAISTFNKRIDFLNDYCFDDRVFYLINWQSPINYNFKLPDNVKLIQLNTVGVACSRN CEEEEEECHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCCEEEEEEEEEEEEECCC AAIDFCQTPWIWFMDDDVVIPNDSISQVLGLIHSANQNNVFISGVKSPEGLDIKSYNLSC CCEEEECCCEEEEECCCEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCC SDNVRSILSVGTIQIIANATAIKNAKVQFPTNMGAGTENNLCDEPVFLHRLSKTIKNLKF CHHHHHHHHHCEEEEEEEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHEEE VFPSGLYVIHPLERSGSVYSTKGSVRSRAMLFREIYGLPLCVFASIYFLCRHRKQIGKFW ECCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHE IYLFSFKRAS EEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA