Click here to switch to the map view.

The map label for this gene is 160875691

Identifier: 160875691

GI number: 160875691

Start: 3053649

End: 3054605

Strand: Direct

Name: 160875691

Synonym: Sbal195_2579

Alternate gene names: NA

Gene position: 3053649-3054605 (Clockwise)

Preceding gene: 160875690

Following gene: 160875694

Centisome position: 57.11

GC content: 48.38

Gene sequence:

>957_bases
ATGGGAAATATCGTTGAGCAGTTGCTGTTTTCTGCCTCGATTACGGGTCCAATCTGTTTGATGTTAGCGCTCGGTGTGAT
CCTAAAACGCACCCAAATCATCAATGAAAACTTTATTGATGTCGCATCAAAATTAGTCTTTAACGTGACGCTGCCAGCCT
TGCTGTTCCTTAGCATTATTAGCTCCAATCACGATCTCGCCTCCAGTGCGCCCTTAATTGGCTATGGTTTAGCGGCCAAT
TTCCTGTTTTTTATACTCTCCACCTATGCAACTGGACGGCTATTTCCCAAGCACAAAGACCAAGGCGTGATCATTCAAGG
GGGATTCAGGGCCAATACCGCGATTATCGGCTTAGCTTATGTTTCCAACGCCTACGGCAGTTCTGGTGTTGCTTTAGCTG
CGGTTTATGTCGCCTCGATGACGCTGCTCTACAATATTCAAGCGGTTATTTGCCTAAGCCCTAAAGGCGAAGAATCCAGC
CAACGCGCATTTGGCGTGATTATTAAAACCATTACTAAAAACCCGCTGATCATTGCCATTATGGTCGGCATGTTGTTCTA
TTTACTTGCTATACCAGTACCGAAAATGGTGCTCGATGCGGGCCAATACTTTGCCAATATGACCCTGCCCTTGGCGCTAC
TGTGCACCGGCGGTTCGCTCGATATTGGTTCACTCAAACATGAAAAGCATTCAACTTGGTTCTCGACCGCATTGAAACTG
ATCTTTGCCCCGCTTTTTATCACGGTTGGGGCCTTGCTGTTGGGCTATCGAGGGATTGAGTTAGCGCTGGTCTTTTTAAT
GAGTTCTGCGCCCACCGCAGCCGCAAGCTATGTGATGGCACGCGCCATGGGTGGCAACGCCACCCTTGCGGCCAATATTA
TCGCGCTGACCACAGTCTGCTCGCTGATCACGTGCACCTTAGGCATCTTTGTATTGTCCACTTTGGAGCTAATCTAG

Upstream 100 bases:

>100_bases
TCGTATTTCTATCGACAAGGCATTCGCTGCAGTGTGATATTCATATCTGTGACAGGTCTAAAATCGACGCAGTATTCAGT
GAATCATTCGAGGAGTAGTT

Downstream 100 bases:

>100_bases
TTTCAGTTAAAAGCTAAGAGCTGGTTGCTTAAACGCTAGAGGAACAAGTTTGAGTGCTGATAAGTCACCATAACTCACAG
TAAAAAAGGCGAGCTATGCT

Product: auxin efflux carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MGNIVEQLLFSASITGPICLMLALGVILKRTQIINENFIDVASKLVFNVTLPALLFLSIISSNHDLASSAPLIGYGLAAN
FLFFILSTYATGRLFPKHKDQGVIIQGGFRANTAIIGLAYVSNAYGSSGVALAAVYVASMTLLYNIQAVICLSPKGEESS
QRAFGVIIKTITKNPLIIAIMVGMLFYLLAIPVPKMVLDAGQYFANMTLPLALLCTGGSLDIGSLKHEKHSTWFSTALKL
IFAPLFITVGALLLGYRGIELALVFLMSSAPTAAASYVMARAMGGNATLAANIIALTTVCSLITCTLGIFVLSTLELI

Sequences:

>Translated_318_residues
MGNIVEQLLFSASITGPICLMLALGVILKRTQIINENFIDVASKLVFNVTLPALLFLSIISSNHDLASSAPLIGYGLAAN
FLFFILSTYATGRLFPKHKDQGVIIQGGFRANTAIIGLAYVSNAYGSSGVALAAVYVASMTLLYNIQAVICLSPKGEESS
QRAFGVIIKTITKNPLIIAIMVGMLFYLLAIPVPKMVLDAGQYFANMTLPLALLCTGGSLDIGSLKHEKHSTWFSTALKL
IFAPLFITVGALLLGYRGIELALVFLMSSAPTAAASYVMARAMGGNATLAANIIALTTVCSLITCTLGIFVLSTLELI
>Mature_317_residues
GNIVEQLLFSASITGPICLMLALGVILKRTQIINENFIDVASKLVFNVTLPALLFLSIISSNHDLASSAPLIGYGLAANF
LFFILSTYATGRLFPKHKDQGVIIQGGFRANTAIIGLAYVSNAYGSSGVALAAVYVASMTLLYNIQAVICLSPKGEESSQ
RAFGVIIKTITKNPLIIAIMVGMLFYLLAIPVPKMVLDAGQYFANMTLPLALLCTGGSLDIGSLKHEKHSTWFSTALKLI
FAPLFITVGALLLGYRGIELALVFLMSSAPTAAASYVMARAMGGNATLAANIIALTTVCSLITCTLGIFVLSTLELI

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 33679; Mature: 33547

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNIVEQLLFSASITGPICLMLALGVILKRTQIINENFIDVASKLVFNVTLPALLFLSII
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SSNHDLASSAPLIGYGLAANFLFFILSTYATGRLFPKHKDQGVIIQGGFRANTAIIGLAY
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHEEEHHH
VSNAYGSSGVALAAVYVASMTLLYNIQAVICLSPKGEESSQRAFGVIIKTITKNPLIIAI
HHCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHH
MVGMLFYLLAIPVPKMVLDAGQYFANMTLPLALLCTGGSLDIGSLKHEKHSTWFSTALKL
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
IFAPLFITVGALLLGYRGIELALVFLMSSAPTAAASYVMARAMGGNATLAANIIALTTVC
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
SLITCTLGIFVLSTLELI
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GNIVEQLLFSASITGPICLMLALGVILKRTQIINENFIDVASKLVFNVTLPALLFLSII
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SSNHDLASSAPLIGYGLAANFLFFILSTYATGRLFPKHKDQGVIIQGGFRANTAIIGLAY
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHEEEHHH
VSNAYGSSGVALAAVYVASMTLLYNIQAVICLSPKGEESSQRAFGVIIKTITKNPLIIAI
HHCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHH
MVGMLFYLLAIPVPKMVLDAGQYFANMTLPLALLCTGGSLDIGSLKHEKHSTWFSTALKL
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
IFAPLFITVGALLLGYRGIELALVFLMSSAPTAAASYVMARAMGGNATLAANIIALTTVC
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
SLITCTLGIFVLSTLELI
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]