| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is metG [H]
Identifier: 160875690
GI number: 160875690
Start: 3051257
End: 3053326
Strand: Direct
Name: metG [H]
Synonym: Sbal195_2578
Alternate gene names: 160875690
Gene position: 3051257-3053326 (Clockwise)
Preceding gene: 160875680
Following gene: 160875691
Centisome position: 57.06
GC content: 48.16
Gene sequence:
>2070_bases ATGGCAACTTCACAACGTAAAATTCTCGTGACCAGCGCACTTCCCTACGCAAACGGACCGATACATTTAGGTCACATGTT GGAATACATCCAGACAGATATCTGGTCGCGTTATCAAAAACTTCGTGGACATGAGTGCCACTATATCTGTGCCGATGACG CCCATGGCACGCCGATCATGCTTAAAGCGCAGCAATTAGGCATAGCGCCTGAAGATATGATCGCCCAAGTGAACAAAGAA CATCAGCAGGATTTTGCCGATTTTAATGTCGCTTTCGATAACTATCACAGCACCCATAGCGAAGAAAACCGTCTCATGGC GAGCGATATTTATCTCAAGCTACGGGACAACGGCTATATCAAGAGCAAGAGCATTTCTCAGTTATTCGATCCTGAAAAAT CCATGTTCCTGCCCGACCGCTTCGTAAAAGGCACTTGCCCTAAATGTAAGTCACCTGATCAATATGGCGATAACTGTGAT TCTTGCGGCGCGACTTACAGCCCAACTGAACTGATCAATCCAAAATCAGCGGTATCTGGTGCAACGCCAGTGATGAAAGA CACTGAGCACTTTTTCTTCGACCTGCCCGCCTTCGAAGGCATGCTAAAAGAGTGGACTCGCTCTGGCGCACTGCAAGTCG AAATGGCCAATAAACTCGACGAATGGTTTGAGCAAGGTCTGCAGCAATGGGACATCACCCGTGATGCACCGTATTTTGGT TTCGAAATTCCCGATGCGCCAGGAAAGTATTTCTACGTTTGGCTAGATGCGCCTATCGGTTATATGGGGTCATTCAAAAA CCTGTGTGCAAAACGTCCTGAACTGAGCTTCGATGAATTCTGGGGCAAAGATTCTACCGCCGAGGTTTACCACTTCATCG GTAAAGACATCGTTTACTTCCATAGCCTCTTCTGGCCAGCCATGCTGCACGGCTCAGGTTATCGTCAGCCAAACAGCGTT TATGCCCACGGTTATGTGACGGTCAACGGCGCGAAAATGTCTAAATCGAAAGGCACCTTCATTAAGGCGCGTACCTATTT AGATCATTTAGATCCTGAATATTTACGTTACTACTACGCCGCTAAACTCAGCAGCCGTATCGACGATTTAGATTTAAATC TAGAAGATTTCGCCCAGCGCGTGAACTCAGATTTAGTCGGTAAACTAGTGAACTTAGCCTCGCGCACCGCAGGTTTTATC ACTAAACGTTTCGATGGCAAGCTCGCGAAAATTAATGACACCACCCTGACTGAGGCGTTTTTAGCCAAGCAAGACGTGAT TGCCGATTTTTACGAGTCGCGCGAATACGGCAAAGCGATGCGCGAAATCATGGCGCTGGCAGATATTGCCAACGGGTTTG TGGCCGATGCTGCGCCTTGGCAAATGGTGAAGCATGATGATCAACAGGAAGCGGCCCATCAAGTGTGTTCAAACGCCTTG AATCTGTTCCGTATTTTAGTGACGTATCTAAAACCTGTATTGCCACGTTTAGCCCAAGATGTGGAAGCCTTCTTCCAATT GCCACTCACTTGGGATGCATTGAGCCAAGATTTAGCGGGTCATGAAATCGCCCCATTCAAGGCAATGATGCAACGTGTTG AGCTAGATAAAGTCAATGCCATGGTTGCTGATTCCAAGGATAACCTGCAAGTCACGGCGGATGCACCAAAGACGGCAGCG CCTGAAAAAATAGCTAAAGCTTCATCGGTTAGCAGTGAGCCGCTGGTTAGTGATCCTATCAGTGAGACCATCAACTTTGA TGATTTCGCGAAAATAGACCTGCGTATCGCTCGCATCGTCAAAGCAGAGCATGTTGCTGACGCTGACAAGTTACTCAAGT TACAACTCGACATCGGTGGTGAAACACGCCAAGTGTTTGCCGGGATCAAATCGGCCTATTCGCCAGAAGATCTCGAAGGC AAGTTGACTGTGATGGTGGCTAACTTAGCGCCACGTAAGATGCGTTTTGGCATGTCAGAAGGCATGGTGTTGGCCGCTGG CCCTGGTGGTAGCGACCTGTGGATTTTAGAACCCCATGAAGGCGCACAGCCTGGCATGCGTGTTAAGTAA
Upstream 100 bases:
>100_bases GCAGATTTAGCTCAATCGGCTCAGCTTTTGATGAAAATCATCCTGTAATCGGTTAGTATCTCTACCAATATTTTTGGCCC ACCACGATATTTGAGACAAG
Downstream 100 bases:
>100_bases TCTGCGCTAGCTAACGCTCAAAAAAATCAATAAGGCCGCATTTATGTGGCCTTATTTGTTGGTATCGATTGTTTGAGCCT ATTTGTAGCTTCGAGTGTCA
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 689; Mature: 688
Protein sequence:
>689_residues MATSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQQLGIAPEDMIAQVNKE HQQDFADFNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKSKSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCD SCGATYSPTELINPKSAVSGATPVMKDTEHFFFDLPAFEGMLKEWTRSGALQVEMANKLDEWFEQGLQQWDITRDAPYFG FEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVYFHSLFWPAMLHGSGYRQPNSV YAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYYAAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFI TKRFDGKLAKINDTTLTEAFLAKQDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAHQVCSNAL NLFRILVTYLKPVLPRLAQDVEAFFQLPLTWDALSQDLAGHEIAPFKAMMQRVELDKVNAMVADSKDNLQVTADAPKTAA PEKIAKASSVSSEPLVSDPISETINFDDFAKIDLRIARIVKAEHVADADKLLKLQLDIGGETRQVFAGIKSAYSPEDLEG KLTVMVANLAPRKMRFGMSEGMVLAAGPGGSDLWILEPHEGAQPGMRVK
Sequences:
>Translated_689_residues MATSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQQLGIAPEDMIAQVNKE HQQDFADFNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKSKSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCD SCGATYSPTELINPKSAVSGATPVMKDTEHFFFDLPAFEGMLKEWTRSGALQVEMANKLDEWFEQGLQQWDITRDAPYFG FEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVYFHSLFWPAMLHGSGYRQPNSV YAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYYAAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFI TKRFDGKLAKINDTTLTEAFLAKQDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAHQVCSNAL NLFRILVTYLKPVLPRLAQDVEAFFQLPLTWDALSQDLAGHEIAPFKAMMQRVELDKVNAMVADSKDNLQVTADAPKTAA PEKIAKASSVSSEPLVSDPISETINFDDFAKIDLRIARIVKAEHVADADKLLKLQLDIGGETRQVFAGIKSAYSPEDLEG KLTVMVANLAPRKMRFGMSEGMVLAAGPGGSDLWILEPHEGAQPGMRVK >Mature_688_residues ATSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQQLGIAPEDMIAQVNKEH QQDFADFNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKSKSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCDS CGATYSPTELINPKSAVSGATPVMKDTEHFFFDLPAFEGMLKEWTRSGALQVEMANKLDEWFEQGLQQWDITRDAPYFGF EIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVYFHSLFWPAMLHGSGYRQPNSVY AHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYYAAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFIT KRFDGKLAKINDTTLTEAFLAKQDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAHQVCSNALN LFRILVTYLKPVLPRLAQDVEAFFQLPLTWDALSQDLAGHEIAPFKAMMQRVELDKVNAMVADSKDNLQVTADAPKTAAP EKIAKASSVSSEPLVSDPISETINFDDFAKIDLRIARIVKAEHVADADKLLKLQLDIGGETRQVFAGIKSAYSPEDLEGK LTVMVANLAPRKMRFGMSEGMVLAAGPGGSDLWILEPHEGAQPGMRVK
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI14043022, Length=635, Percent_Identity=28.1889763779528, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI24308436, Length=517, Percent_Identity=25.3384912959381, Blast_Score=161, Evalue=1e-39, Organism=Escherichia coli, GI1788432, Length=692, Percent_Identity=66.1849710982659, Blast_Score=984, Evalue=0.0, Organism=Escherichia coli, GI1789455, Length=108, Percent_Identity=37.962962962963, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17540794, Length=668, Percent_Identity=27.0958083832335, Blast_Score=250, Evalue=2e-66, Organism=Caenorhabditis elegans, GI212645096, Length=515, Percent_Identity=23.8834951456311, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71992781, Length=410, Percent_Identity=24.1463414634146, Blast_Score=108, Evalue=6e-24, Organism=Saccharomyces cerevisiae, GI6321704, Length=559, Percent_Identity=28.4436493738819, Blast_Score=249, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6321610, Length=543, Percent_Identity=23.9410681399632, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24655311, Length=582, Percent_Identity=29.3814432989691, Blast_Score=247, Evalue=2e-65, Organism=Drosophila melanogaster, GI21358483, Length=535, Percent_Identity=23.5514018691589, Blast_Score=129, Evalue=7e-30,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR004495 - InterPro: IPR014758 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR014729 - InterPro: IPR002547 - InterPro: IPR009080 [H]
Pfam domain/function: PF09334 tRNA-synt_1g; PF01588 tRNA_bind [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 77312; Mature: 77180
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS50886 TRBD ; PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIM CCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEE LKAQQLGIAPEDMIAQVNKEHQQDFADFNVAFDNYHSTHSEENRLMASDIYLKLRDNGYI EEHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEEEECCCCCE KSKSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSG ECCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCHHHCCCHHHCCC ATPVMKDTEHFFFDLPAFEGMLKEWTRSGALQVEMANKLDEWFEQGLQQWDITRDAPYFG CCCCCCCCCHHEEECHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCC FEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVYF EECCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH HSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYYA HHHHHHHHHCCCCCCCCCCEEEEEEEEEECCEECCCCCCEEEEHHHHHHCCHHHHHHHHH AKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKINDTTLTEAF HHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHH LAKQDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAHQVCSNAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHH NLFRILVTYLKPVLPRLAQDVEAFFQLPLTWDALSQDLAGHEIAPFKAMMQRVELDKVNA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHE MVADSKDNLQVTADAPKTAAPEKIAKASSVSSEPLVSDPISETINFDDFAKIDLRIARIV EEECCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH KAEHVADADKLLKLQLDIGGETRQVFAGIKSAYSPEDLEGKLTVMVANLAPRKMRFGMSE HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHCCCCC GMVLAAGPGGSDLWILEPHEGAQPGMRVK CEEEEECCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure ATSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIM CCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEE LKAQQLGIAPEDMIAQVNKEHQQDFADFNVAFDNYHSTHSEENRLMASDIYLKLRDNGYI EEHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEEEECCCCCE KSKSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSG ECCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCHHHCCCHHHCCC ATPVMKDTEHFFFDLPAFEGMLKEWTRSGALQVEMANKLDEWFEQGLQQWDITRDAPYFG CCCCCCCCCHHEEECHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCC FEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVYF EECCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH HSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYYA HHHHHHHHHCCCCCCCCCCEEEEEEEEEECCEECCCCCCEEEEHHHHHHCCHHHHHHHHH AKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKINDTTLTEAF HHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHH LAKQDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAHQVCSNAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHH NLFRILVTYLKPVLPRLAQDVEAFFQLPLTWDALSQDLAGHEIAPFKAMMQRVELDKVNA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHE MVADSKDNLQVTADAPKTAAPEKIAKASSVSSEPLVSDPISETINFDDFAKIDLRIARIV EEECCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH KAEHVADADKLLKLQLDIGGETRQVFAGIKSAYSPEDLEGKLTVMVANLAPRKMRFGMSE HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHCCCCC GMVLAAGPGGSDLWILEPHEGAQPGMRVK CEEEEECCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA