| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875622
Identifier: 160875622
GI number: 160875622
Start: 2961207
End: 2961866
Strand: Direct
Name: 160875622
Synonym: Sbal195_2510
Alternate gene names: NA
Gene position: 2961207-2961866 (Clockwise)
Preceding gene: 160875618
Following gene: 160875623
Centisome position: 55.38
GC content: 47.73
Gene sequence:
>660_bases TTGTTCACTGACACCAATCCGTATTTTAGTGTGCCTCACCCTTTTACCGCCTACTTAAGTCTGTGGCCGAGTTCCGAGCC ATTACCCTCTGAAATGGCATTAAGATCAATGCAATCATTGGGTATTCAGCTACTCAGCGAAGTGAAAACGCTCGAAGCCA ATTGCTTGCTGCAACTGCGCCATTTAGACAACGACGCTAAAGTGGTGGTGGACTTTTTAAAGCTGCAATCCCGCAAAGTG GATTTAGTGCTGCAGCATGTATTAGAGAAAGAAACCCAAGAAGGCGAAAAATGCATTGGCAATCAGTTTGGTGGCAGCGG CCTAAGACTACTCACACCCACAGCCTTGGACATCGGCTCAAACTATAAAATCACCCTGTTTATTCACGACGAGTTAGTCG CCATTCTTTGTTTTGGCAAAGTAACCGCCTCAACCGCGCAAAAAACGCTATCTACCGAGAGCAGCGCCAATAGCGGTGAC ACACAAAGCCCCGAGTTCAATACTCAGGCGGAACTTCACTCTCCTGCCCCGCAATGGCAAACCGACTTTGAGTTCAGTCA AATTCTCGAAGCTGACGTCGAGCAATTAGTCAAAGCCAGCCTCAATGTGCAGCAGAAACAACTCAAGTTACGTAAACTCG CCAGAGACGAGCGTCAATAG
Upstream 100 bases:
>100_bases ATTCATTGAAAGAGGGTTGCGTCCTGTGTGCTGAACTTGCTAAATCATGAAGATGGGCACGATAATAGGGGTATTGGTCC TATAAATAAAGAGGCAAGCC
Downstream 100 bases:
>100_bases CCGCTGACTTTTCACTGGCACCTGCGCCATCAAGTCTCTACAATGTCTGCAACTCTTTGTGAATGAATCAGTTTATCGTA CGCCAATGACTCACATATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MFTDTNPYFSVPHPFTAYLSLWPSSEPLPSEMALRSMQSLGIQLLSEVKTLEANCLLQLRHLDNDAKVVVDFLKLQSRKV DLVLQHVLEKETQEGEKCIGNQFGGSGLRLLTPTALDIGSNYKITLFIHDELVAILCFGKVTASTAQKTLSTESSANSGD TQSPEFNTQAELHSPAPQWQTDFEFSQILEADVEQLVKASLNVQQKQLKLRKLARDERQ
Sequences:
>Translated_219_residues MFTDTNPYFSVPHPFTAYLSLWPSSEPLPSEMALRSMQSLGIQLLSEVKTLEANCLLQLRHLDNDAKVVVDFLKLQSRKV DLVLQHVLEKETQEGEKCIGNQFGGSGLRLLTPTALDIGSNYKITLFIHDELVAILCFGKVTASTAQKTLSTESSANSGD TQSPEFNTQAELHSPAPQWQTDFEFSQILEADVEQLVKASLNVQQKQLKLRKLARDERQ >Mature_219_residues MFTDTNPYFSVPHPFTAYLSLWPSSEPLPSEMALRSMQSLGIQLLSEVKTLEANCLLQLRHLDNDAKVVVDFLKLQSRKV DLVLQHVLEKETQEGEKCIGNQFGGSGLRLLTPTALDIGSNYKITLFIHDELVAILCFGKVTASTAQKTLSTESSANSGD TQSPEFNTQAELHSPAPQWQTDFEFSQILEADVEQLVKASLNVQQKQLKLRKLARDERQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24491; Mature: 24491
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTDTNPYFSVPHPFTAYLSLWPSSEPLPSEMALRSMQSLGIQLLSEVKTLEANCLLQLR CCCCCCCCEECCCCHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLDNDAKVVVDFLKLQSRKVDLVLQHVLEKETQEGEKCIGNQFGGSGLRLLTPTALDIGS HCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEECCC NYKITLFIHDELVAILCFGKVTASTAQKTLSTESSANSGDTQSPEFNTQAELHSPAPQWQ CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDFEFSQILEADVEQLVKASLNVQQKQLKLRKLARDERQ CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFTDTNPYFSVPHPFTAYLSLWPSSEPLPSEMALRSMQSLGIQLLSEVKTLEANCLLQLR CCCCCCCCEECCCCHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLDNDAKVVVDFLKLQSRKVDLVLQHVLEKETQEGEKCIGNQFGGSGLRLLTPTALDIGS HCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEECCC NYKITLFIHDELVAILCFGKVTASTAQKTLSTESSANSGDTQSPEFNTQAELHSPAPQWQ CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDFEFSQILEADVEQLVKASLNVQQKQLKLRKLARDERQ CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA