| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is suhB [H]
Identifier: 160875618
GI number: 160875618
Start: 2956670
End: 2957473
Strand: Direct
Name: suhB [H]
Synonym: Sbal195_2506
Alternate gene names: 160875618
Gene position: 2956670-2957473 (Clockwise)
Preceding gene: 160875603
Following gene: 160875622
Centisome position: 55.29
GC content: 46.77
Gene sequence:
>804_bases ATGCATCCGATGCTGACGATTGCTGTACGCGCTGCCCGCGCGGCCGGCCAAAATATTATGCGCGCCTATACCGAACTTGA CCGTATTGAAGTCAGTTCAAAAGGTATCAACGATTTTGTTACCAGTGTAGACAAGGAAGCAGAAGCGACAATTACTTACC AAATTCGTAAATCTTACCCTGATCACACTATCGTGGGTGAAGAGAAAGGCGAAAACCGCGGTGAGAATAACGACTACGTT TGGATAGTTGACCCTCTGGATGGCACTAACAACTTTGTTAGAGGTATTCCCCACTTCGCGATTTCTATCGCTCTGCAACA TAAAGGTAAAACTGAAGTTGCGGTTGTTTACGATCCTGTCCGTGAAGAACTCTTTACCGCCGTCCGTGGTAAAGGCGCAA AACTCAATGATTTCCGTCTGCGTGTTACTAACGTAAATGAATTAGCCCCTACCATGATTGGTACTGGCTTCCCATTCAAG GCGCGTCAACACACTGAAACTTACATGGCTATTTTCGGCGAAGTCTTCGGCCAATGTGCTGACTTACGTCGTGCAGGTTC TGCCGCATTAGATTTAGCCTATGTTGCCGCGGGTCGTTTAGACGGTTTCTTCGAAATCGGCTTAAAGCCATGGGATATCG CTGCAGGCGATCTTATCTGCCGCGAAGCGGGCGGTACGGTTACCGATTTCACTGGCAACCATAACTATTTGATTTCTGGT AACATCGTTGCAGGTTCACCTAAAGTGACCACAGAACTAGTTAAAATCATGCGTCCATTGTTGAACGAAGCATTAAAGCG TTAA
Upstream 100 bases:
>100_bases TTGCCGAATGCTTATATGAAAATCGGTATTTGATATAACTATCAAATCGGGTATAATGCCGCCCGCTATTTTAACGTTCT TTAACATCCAGGGGATTGCA
Downstream 100 bases:
>100_bases TTGTAGGCGTTAATCTCGAAGTGTTATTCTCGAAGCGTTAGTCTCGATTAACACTTAGCTTTCCAAAACGCATAGATACA AAACGTTAGACATAAAAAAG
Product: inositol-phosphate phosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MHPMLTIAVRAARAAGQNIMRAYTELDRIEVSSKGINDFVTSVDKEAEATITYQIRKSYPDHTIVGEEKGENRGENNDYV WIVDPLDGTNNFVRGIPHFAISIALQHKGKTEVAVVYDPVREELFTAVRGKGAKLNDFRLRVTNVNELAPTMIGTGFPFK ARQHTETYMAIFGEVFGQCADLRRAGSAALDLAYVAAGRLDGFFEIGLKPWDIAAGDLICREAGGTVTDFTGNHNYLISG NIVAGSPKVTTELVKIMRPLLNEALKR
Sequences:
>Translated_267_residues MHPMLTIAVRAARAAGQNIMRAYTELDRIEVSSKGINDFVTSVDKEAEATITYQIRKSYPDHTIVGEEKGENRGENNDYV WIVDPLDGTNNFVRGIPHFAISIALQHKGKTEVAVVYDPVREELFTAVRGKGAKLNDFRLRVTNVNELAPTMIGTGFPFK ARQHTETYMAIFGEVFGQCADLRRAGSAALDLAYVAAGRLDGFFEIGLKPWDIAAGDLICREAGGTVTDFTGNHNYLISG NIVAGSPKVTTELVKIMRPLLNEALKR >Mature_267_residues MHPMLTIAVRAARAAGQNIMRAYTELDRIEVSSKGINDFVTSVDKEAEATITYQIRKSYPDHTIVGEEKGENRGENNDYV WIVDPLDGTNNFVRGIPHFAISIALQHKGKTEVAVVYDPVREELFTAVRGKGAKLNDFRLRVTNVNELAPTMIGTGFPFK ARQHTETYMAIFGEVFGQCADLRRAGSAALDLAYVAAGRLDGFFEIGLKPWDIAAGDLICREAGGTVTDFTGNHNYLISG NIVAGSPKVTTELVKIMRPLLNEALKR
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=254, Percent_Identity=32.2834645669291, Blast_Score=137, Evalue=7e-33, Organism=Homo sapiens, GI221625487, Length=256, Percent_Identity=32.03125, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI7657236, Length=252, Percent_Identity=32.5396825396825, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI221625507, Length=140, Percent_Identity=36.4285714285714, Blast_Score=95, Evalue=8e-20, Organism=Escherichia coli, GI1788882, Length=267, Percent_Identity=62.5468164794007, Blast_Score=357, Evalue=1e-100, Organism=Escherichia coli, GI1790659, Length=177, Percent_Identity=29.9435028248588, Blast_Score=78, Evalue=7e-16, Organism=Caenorhabditis elegans, GI193202572, Length=256, Percent_Identity=32.03125, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI193202570, Length=257, Percent_Identity=31.9066147859922, Blast_Score=119, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6320493, Length=202, Percent_Identity=36.1386138613861, Blast_Score=118, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6321836, Length=204, Percent_Identity=32.3529411764706, Blast_Score=104, Evalue=2e-23, Organism=Drosophila melanogaster, GI21357329, Length=262, Percent_Identity=35.4961832061069, Blast_Score=155, Evalue=3e-38, Organism=Drosophila melanogaster, GI24664926, Length=235, Percent_Identity=34.8936170212766, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI21357303, Length=252, Percent_Identity=32.5396825396825, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI24664922, Length=232, Percent_Identity=34.9137931034483, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI21357957, Length=271, Percent_Identity=34.3173431734317, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI24664918, Length=267, Percent_Identity=31.4606741573034, Blast_Score=115, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29375; Mature: 29375
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPMLTIAVRAARAAGQNIMRAYTELDRIEVSSKGINDFVTSVDKEAEATITYQIRKSYP CCCCEEHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHCCCCCCEEEEEEEECCCC DHTIVGEEKGENRGENNDYVWIVDPLDGTNNFVRGIPHFAISIALQHKGKTEVAVVYDPV CCEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCEEEEEEEECCCCCEEEEEECHH REELFTAVRGKGAKLNDFRLRVTNVNELAPTMIGTGFPFKARQHTETYMAIFGEVFGQCA HHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH DLRRAGSAALDLAYVAAGRLDGFFEIGLKPWDIAAGDLICREAGGTVTDFTGNHNYLISG HHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEC NIVAGSPKVTTELVKIMRPLLNEALKR CEEECCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHPMLTIAVRAARAAGQNIMRAYTELDRIEVSSKGINDFVTSVDKEAEATITYQIRKSYP CCCCEEHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHCCCCCCEEEEEEEECCCC DHTIVGEEKGENRGENNDYVWIVDPLDGTNNFVRGIPHFAISIALQHKGKTEVAVVYDPV CCEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCEEEEEEEECCCCCEEEEEECHH REELFTAVRGKGAKLNDFRLRVTNVNELAPTMIGTGFPFKARQHTETYMAIFGEVFGQCA HHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH DLRRAGSAALDLAYVAAGRLDGFFEIGLKPWDIAAGDLICREAGGTVTDFTGNHNYLISG HHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEC NIVAGSPKVTTELVKIMRPLLNEALKR CEEECCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]