| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160875568
Identifier: 160875568
GI number: 160875568
Start: 2906158
End: 2907549
Strand: Direct
Name: 160875568
Synonym: Sbal195_2456
Alternate gene names: NA
Gene position: 2906158-2907549 (Clockwise)
Preceding gene: 160875566
Following gene: 160875569
Centisome position: 54.35
GC content: 48.2
Gene sequence:
>1392_bases ATGAAACGTTTTATTGGCGTTAAACCGCTAGCGTTTTTCAGTGCACTGTTGATCGCTACTTTACTTGCACTTTTTCCGCT GAGTCAGCATCCCGCGGTGTTTTCCTACAGCGCTGGCGTAGTATTAGTGACCTTGATGTTTTGGAGCACAGGTTTTTTCC CGCCCTTTATGGCGGGGTTAATATTTTTTACCCTTGCCACCATTTTCAAACTCATTGAGCCGAGTGTACTTTTTTCAGGA TTCGGCTCGACTGCGGTGTGGTTAATCATTTCAGGGTTTGTGATTGGCAGTGCCATCACTCAGTCTGGCTTAAGTCGCAG AATGGCCAGTTTTATTGCCCCCATACTGACCTCAAGTTATCCACGCTTGATTGCGGGTTTGGTCTTTAGTGCCGTGCTGC TTGGCTTTGTGATGCCCTCATCCGTTGGCCGTGCGGTGGTCATGGTGCCAATTGGTATGGCGTTAGCTGAGCAAGTCGGT TTTGCTCGTGGTAGTCATGGGCGGATAGGCATTGCGACCGCCTTGGCACTGGCGTGTAACATGCCCAGTTTTGCCGTGTT GCCCGCGAATATTCCCAATATGATATTGGCGGGTTCCAGCGAGAATCTATTCAATATCCACTTTGGTTATACCGAGTATC TCTTGCTGCATTTTCCGATCCTTGGTTTGCTCAAATCGATATTGATTGTGGCGCTAGTCGTCTTCCTATTTCCTGCAAAA ATTGATGAAAACCAGCCTGAACGCATTATTGAAACAGAAGCTTATAACCTTGGTATGCAAAAGAAAGTCACAGTATTACT TGCGATCACTTTACTGTTTTGGGTGACAGACTCACTGCACGGGGTCAATCCGGCGTGGGTTGGACTGACCACCGCTATCT TGTTATTGCTCCCCAAATGGGGAGTGCTTGAGCCTAAGAGTTTTAATAGTTCGGTGGATTTTGCGACCGTCATTTTTGTC GCAGCGGCCTTAGGTCTAGGGGCATTGGTCAATCAATCTGGACTTGGCACTGCGCTAGGCCAATTGTTCAGTGAATGGCT ACCATTGCAGCAAGGGGCATCGTTCCTGAATTTCATGTCGTTATCGCTGATGGGGACGCTGACGGGATTGGTAGCAACGG TTCCAGGTGTGCCGACAGTGTTGTCCCCCATGGCGGCAGATTTTGCCAATGCAACTGGCTTCTCCACCCCTGCAGTATTA ATGACGCAGGTGATCGGTTTCTCAACCGTGATTTTTCCTTATCAGGTTGCCCCGTTGATTTTGGCGATGCAATTATCCCA AGAGCCCTTAAGCAAACTACTTAACATCACCTTACCGCTGGCGGCAATCACTCTAATTGCACTTATCCCACTGGATTATC TATGGTGGCTATGGCTCGGTTGGATTAACTAA
Upstream 100 bases:
>100_bases TTAGGAACAGGTTTTGACATATTACCCTCTTAAAACGCCAGACCAAGTCAGTTATCTTAGTTGGCATCTTTTACGTATTC AACCCAATAGGTCGGTAAAC
Downstream 100 bases:
>100_bases ATTGCGTTAACTAAAGCGGGCTAACTAAAATGCGTTAACTAAATTAAATTGACGAAACACTCACCCTTGGCGGTATTGAC GCCGCCAAGGGTGCTTTAGA
Product: sodium/sulfate symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MKRFIGVKPLAFFSALLIATLLALFPLSQHPAVFSYSAGVVLVTLMFWSTGFFPPFMAGLIFFTLATIFKLIEPSVLFSG FGSTAVWLIISGFVIGSAITQSGLSRRMASFIAPILTSSYPRLIAGLVFSAVLLGFVMPSSVGRAVVMVPIGMALAEQVG FARGSHGRIGIATALALACNMPSFAVLPANIPNMILAGSSENLFNIHFGYTEYLLLHFPILGLLKSILIVALVVFLFPAK IDENQPERIIETEAYNLGMQKKVTVLLAITLLFWVTDSLHGVNPAWVGLTTAILLLLPKWGVLEPKSFNSSVDFATVIFV AAALGLGALVNQSGLGTALGQLFSEWLPLQQGASFLNFMSLSLMGTLTGLVATVPGVPTVLSPMAADFANATGFSTPAVL MTQVIGFSTVIFPYQVAPLILAMQLSQEPLSKLLNITLPLAAITLIALIPLDYLWWLWLGWIN
Sequences:
>Translated_463_residues MKRFIGVKPLAFFSALLIATLLALFPLSQHPAVFSYSAGVVLVTLMFWSTGFFPPFMAGLIFFTLATIFKLIEPSVLFSG FGSTAVWLIISGFVIGSAITQSGLSRRMASFIAPILTSSYPRLIAGLVFSAVLLGFVMPSSVGRAVVMVPIGMALAEQVG FARGSHGRIGIATALALACNMPSFAVLPANIPNMILAGSSENLFNIHFGYTEYLLLHFPILGLLKSILIVALVVFLFPAK IDENQPERIIETEAYNLGMQKKVTVLLAITLLFWVTDSLHGVNPAWVGLTTAILLLLPKWGVLEPKSFNSSVDFATVIFV AAALGLGALVNQSGLGTALGQLFSEWLPLQQGASFLNFMSLSLMGTLTGLVATVPGVPTVLSPMAADFANATGFSTPAVL MTQVIGFSTVIFPYQVAPLILAMQLSQEPLSKLLNITLPLAAITLIALIPLDYLWWLWLGWIN >Mature_463_residues MKRFIGVKPLAFFSALLIATLLALFPLSQHPAVFSYSAGVVLVTLMFWSTGFFPPFMAGLIFFTLATIFKLIEPSVLFSG FGSTAVWLIISGFVIGSAITQSGLSRRMASFIAPILTSSYPRLIAGLVFSAVLLGFVMPSSVGRAVVMVPIGMALAEQVG FARGSHGRIGIATALALACNMPSFAVLPANIPNMILAGSSENLFNIHFGYTEYLLLHFPILGLLKSILIVALVVFLFPAK IDENQPERIIETEAYNLGMQKKVTVLLAITLLFWVTDSLHGVNPAWVGLTTAILLLLPKWGVLEPKSFNSSVDFATVIFV AAALGLGALVNQSGLGTALGQLFSEWLPLQQGASFLNFMSLSLMGTLTGLVATVPGVPTVLSPMAADFANATGFSTPAVL MTQVIGFSTVIFPYQVAPLILAMQLSQEPLSKLLNITLPLAAITLIALIPLDYLWWLWLGWIN
Specific function: Unknown
COG id: COG0471
COG function: function code P; Di- and tricarboxylate transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SLC13A transporter (TC 2.A.47) family. SODIT1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001898 [H]
Pfam domain/function: PF00939 Na_sulph_symp [H]
EC number: NA
Molecular weight: Translated: 49602; Mature: 49602
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFIGVKPLAFFSALLIATLLALFPLSQHPAVFSYSAGVVLVTLMFWSTGFFPPFMAGL CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHH IFFTLATIFKLIEPSVLFSGFGSTAVWLIISGFVIGSAITQSGLSRRMASFIAPILTSSY HHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH PRLIAGLVFSAVLLGFVMPSSVGRAVVMVPIGMALAEQVGFARGSHGRIGIATALALACN HHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC MPSFAVLPANIPNMILAGSSENLFNIHFGYTEYLLLHFPILGLLKSILIVALVVFLFPAK CCCCEEECCCCCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IDENQPERIIETEAYNLGMQKKVTVLLAITLLFWVTDSLHGVNPAWVGLTTAILLLLPKW CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC GVLEPKSFNSSVDFATVIFVAAALGLGALVNQSGLGTALGQLFSEWLPLQQGASFLNFMS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH LSLMGTLTGLVATVPGVPTVLSPMAADFANATGFSTPAVLMTQVIGFSTVIFPYQVAPLI HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LAMQLSQEPLSKLLNITLPLAAITLIALIPLDYLWWLWLGWIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRFIGVKPLAFFSALLIATLLALFPLSQHPAVFSYSAGVVLVTLMFWSTGFFPPFMAGL CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHH IFFTLATIFKLIEPSVLFSGFGSTAVWLIISGFVIGSAITQSGLSRRMASFIAPILTSSY HHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH PRLIAGLVFSAVLLGFVMPSSVGRAVVMVPIGMALAEQVGFARGSHGRIGIATALALACN HHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC MPSFAVLPANIPNMILAGSSENLFNIHFGYTEYLLLHFPILGLLKSILIVALVVFLFPAK CCCCEEECCCCCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IDENQPERIIETEAYNLGMQKKVTVLLAITLLFWVTDSLHGVNPAWVGLTTAILLLLPKW CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC GVLEPKSFNSSVDFATVIFVAAALGLGALVNQSGLGTALGQLFSEWLPLQQGASFLNFMS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH LSLMGTLTGLVATVPGVPTVLSPMAADFANATGFSTPAVLMTQVIGFSTVIFPYQVAPLI HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LAMQLSQEPLSKLLNITLPLAAITLIALIPLDYLWWLWLGWIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8405966 [H]