| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875566
Identifier: 160875566
GI number: 160875566
Start: 2904006
End: 2905190
Strand: Direct
Name: 160875566
Synonym: Sbal195_2454
Alternate gene names: NA
Gene position: 2904006-2905190 (Clockwise)
Preceding gene: 160875565
Following gene: 160875568
Centisome position: 54.31
GC content: 41.27
Gene sequence:
>1185_bases ATGCGACGTTTTTTGCGGGTAATGAAATGGATTTTAATCTCTCTATTATGTATTCCTGTCAGTTTATATTTCATTCTTCT GCTTATAAATTTTCGAGACAGTCCACCTTCTGAACTGGCACAAAACTACTTAGCCGACATCGCGGAAAATGATAATGCAC TATCAAATCACCTTAACGATAATGCTTATGTATTTGTACTCGGTTTTGATGTCAGCAATACTGCTTCGCCAATGGATGTT GGACTAGAACGCCTCAAGAAGTTACAACACCTCGGGGTTATGGATAAACCTCAAGATAACCAACAAATCCGTTTTGAAAA GCCCCAATTACCGCTTGAACAATGCATCAAAGAAGATGATTTTCTCTCCAGCTGTAATGTAATGCTTAAACAAGAGAACA ATCTTAACGCCTTACTCGATGAATATAATTGGTTAATCGTCCGCTACCAGCAGCTGCTTAATATCGGTACTTGGCAGGAT GGCAGCCAATTTAATGTTTTTACAGATAGTATGCCCTTTACCCATCTGTTAGCAGCACAAAAACTCTATCTGTTTAATGT ACTGACCGATGCCAGCACTATGGATCCCCTACAAGTCGCCGAGGCAATCAACCAAGATATGCTATTTTGGCAACGGCTAT CAGCAAGCACTCATATGCTTATCGGTAAGATGATGAGTAATGCTGGAATGGAAGCGAATATGAAACTTGGAGAGTTGGTA ATGAGTCAATTGCCGCATTCACAACTAATCGAGGCGTTACCACCAAGCTGGAAGCATGCACTGTCACCAGAAGTACTTTC GTTTGACAATGTAAAAAGGGGCGAATGGTATTACTTTACCCAGATAACCAGAGCGACACAGGTCACTAGTGATACTGACA TAAATACAAAGCTAATAGAGTGGTTACTGCTACCATTGATGCAACACCAAGATACCGCCAATCGTTATGCCGCGATCCTA AACGACACGGCTCCCCTGAATGAATGTCCTAGCAATTTATCAATCGAAACTTTCAGCCAATACATCTATAACCCCGTAGG GAAATTCATACTCTGCTCTGGCATTATTTCATTAACCCCTTATCAGGAAAGGTTTAACAGACTTGAGCATCAACGAGCGG AGCTTGTTACTCGACTCCCACAAGATAGCACGAATATTAACTCCACTCTGACTGGCCAATTATAA
Upstream 100 bases:
>100_bases TTTTTAACATTCAAATCCCTTCACAGGCTGACTTCCCAAGCAACCAAATCGTGTTACATTATGTAATTAATGGCGGTTTA ATTTGTTAACAGGATTTTTA
Downstream 100 bases:
>100_bases GAATCGATATACAAAACATAGATATTTGTTATGGCTGACTCAGTTTATTCTTGCGCGGGAGTAAACTGATTTTTCCTGTT TTTCATCAGCTTATGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MRRFLRVMKWILISLLCIPVSLYFILLLINFRDSPPSELAQNYLADIAENDNALSNHLNDNAYVFVLGFDVSNTASPMDV GLERLKKLQHLGVMDKPQDNQQIRFEKPQLPLEQCIKEDDFLSSCNVMLKQENNLNALLDEYNWLIVRYQQLLNIGTWQD GSQFNVFTDSMPFTHLLAAQKLYLFNVLTDASTMDPLQVAEAINQDMLFWQRLSASTHMLIGKMMSNAGMEANMKLGELV MSQLPHSQLIEALPPSWKHALSPEVLSFDNVKRGEWYYFTQITRATQVTSDTDINTKLIEWLLLPLMQHQDTANRYAAIL NDTAPLNECPSNLSIETFSQYIYNPVGKFILCSGIISLTPYQERFNRLEHQRAELVTRLPQDSTNINSTLTGQL
Sequences:
>Translated_394_residues MRRFLRVMKWILISLLCIPVSLYFILLLINFRDSPPSELAQNYLADIAENDNALSNHLNDNAYVFVLGFDVSNTASPMDV GLERLKKLQHLGVMDKPQDNQQIRFEKPQLPLEQCIKEDDFLSSCNVMLKQENNLNALLDEYNWLIVRYQQLLNIGTWQD GSQFNVFTDSMPFTHLLAAQKLYLFNVLTDASTMDPLQVAEAINQDMLFWQRLSASTHMLIGKMMSNAGMEANMKLGELV MSQLPHSQLIEALPPSWKHALSPEVLSFDNVKRGEWYYFTQITRATQVTSDTDINTKLIEWLLLPLMQHQDTANRYAAIL NDTAPLNECPSNLSIETFSQYIYNPVGKFILCSGIISLTPYQERFNRLEHQRAELVTRLPQDSTNINSTLTGQL >Mature_394_residues MRRFLRVMKWILISLLCIPVSLYFILLLINFRDSPPSELAQNYLADIAENDNALSNHLNDNAYVFVLGFDVSNTASPMDV GLERLKKLQHLGVMDKPQDNQQIRFEKPQLPLEQCIKEDDFLSSCNVMLKQENNLNALLDEYNWLIVRYQQLLNIGTWQD GSQFNVFTDSMPFTHLLAAQKLYLFNVLTDASTMDPLQVAEAINQDMLFWQRLSASTHMLIGKMMSNAGMEANMKLGELV MSQLPHSQLIEALPPSWKHALSPEVLSFDNVKRGEWYYFTQITRATQVTSDTDINTKLIEWLLLPLMQHQDTANRYAAIL NDTAPLNECPSNLSIETFSQYIYNPVGKFILCSGIISLTPYQERFNRLEHQRAELVTRLPQDSTNINSTLTGQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45173; Mature: 45173
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFLRVMKWILISLLCIPVSLYFILLLINFRDSPPSELAQNYLADIAENDNALSNHLND CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHCCCC NAYVFVLGFDVSNTASPMDVGLERLKKLQHLGVMDKPQDNQQIRFEKPQLPLEQCIKEDD CEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHCCCCH FLSSCNVMLKQENNLNALLDEYNWLIVRYQQLLNIGTWQDGSQFNVFTDSMPFTHLLAAQ HHHHCHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHH KLYLFNVLTDASTMDPLQVAEAINQDMLFWQRLSASTHMLIGKMMSNAGMEANMKLGELV HHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHH MSQLPHSQLIEALPPSWKHALSPEVLSFDNVKRGEWYYFTQITRATQVTSDTDINTKLIE HHHCCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCHHHHHH WLLLPLMQHQDTANRYAAILNDTAPLNECPSNLSIETFSQYIYNPVGKFILCSGIISLTP HHHHHHHHCCCHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC YQERFNRLEHQRAELVTRLPQDSTNINSTLTGQL HHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCC >Mature Secondary Structure MRRFLRVMKWILISLLCIPVSLYFILLLINFRDSPPSELAQNYLADIAENDNALSNHLND CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHCCCC NAYVFVLGFDVSNTASPMDVGLERLKKLQHLGVMDKPQDNQQIRFEKPQLPLEQCIKEDD CEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHCCCCH FLSSCNVMLKQENNLNALLDEYNWLIVRYQQLLNIGTWQDGSQFNVFTDSMPFTHLLAAQ HHHHCHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHH KLYLFNVLTDASTMDPLQVAEAINQDMLFWQRLSASTHMLIGKMMSNAGMEANMKLGELV HHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHH MSQLPHSQLIEALPPSWKHALSPEVLSFDNVKRGEWYYFTQITRATQVTSDTDINTKLIE HHHCCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCHHHHHH WLLLPLMQHQDTANRYAAILNDTAPLNECPSNLSIETFSQYIYNPVGKFILCSGIISLTP HHHHHHHHCCCHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC YQERFNRLEHQRAELVTRLPQDSTNINSTLTGQL HHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA