| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is cga [H]
Identifier: 160875565
GI number: 160875565
Start: 2900984
End: 2903560
Strand: Direct
Name: cga [H]
Synonym: Sbal195_2453
Alternate gene names: 160875565
Gene position: 2900984-2903560 (Clockwise)
Preceding gene: 160875564
Following gene: 160875566
Centisome position: 54.25
GC content: 50.8
Gene sequence:
>2577_bases ATGGAATCGAGTCCTACGCCGCAGCAGGATCTGCACACTAGCCAAACCCGTCACGCACAAACGTTAACAAGGCGCAGCCG CCTAGCGCTTGCCGTCGCCGCAAGTCTATTAGGGACAATAGGATTCACTGCTTGTTCACCCACATCGAATTCAGCAACAC CAAGCATGAGTGGCAATGCCGCATCAAATGTGCAGCTGGTTGCGCCCGGCGCACCGGGTAAAGCACCGACTTGGGCATTT TCGGGTAAAACCGGTATTGGAACGTCGTACGAGCCTTACACCCAAGGTCAATACCAAGATGCCAAGCAGAATCCTATTAG CCGCGTTTGGTTCTCCCTCGCCCAAGGTATTTTAACCGAAACCATGTATGGTCTTATTCACAATGCGCAGCTCAAAGAAC TGCAATTTGTGATCACGGGAAATGGCTTTGTCGATACAGAAAAAGATAACACCATCAGCAGCATAGAATATTTAGATACC GATGCTAATGGTCGCCCACAATCCCTTGCCTATAAAATTATCAATAAAGATATTGAAGGTAAGTATCAGATTGAAAAGCA TATCTTTACCGATCCTGACCGCGACACCCTAATGATGCGCGTCACCTTTACCGCCTTTGAAGACGGCATTACGCCGCATT TGTATGTCAATCCGCATATCGATAACGCGGGCGCCAATGATATCGGCCGCATCGACACTAATACAGACAATCATACCAAC ACACATGCTGGCAATCAGGCGCTGGTGGCCTATACCGCCGCCAAAGACAGCAGCGTGATGACGGTCAAATCCGAGCTGAA TTTTGTGCAGGCAACGACAGGCTTTGTCGGTGTCTCCGATGGTCTAGCCGATTTGGCCGATAACGGCAAACTCGATACAC CCTATCAAACGACCAGTACGCAAGATAAATCGACCGTTGGCAATATAGCTTTTACTGCGAGTTACCCTACGCTCATCAAA GCCAAACCCGTCACTTTTAATCTCGTCATCGGTTTTGGTAAAGATGGAGCACAGAGTTTAGCCAATGCCGATGCCACTTT GGCCGCAGGTTATGATGCTGTGCTGAGCGCCTATAAAGGCGATGCCACCCATGTCGGCTGGCACGATTACTTAAGCTCGC TGCCCGCCATCGCAAACATGGCCAACAACACCACAGATAGCGGTAAGCTGCTGTATACCAGTGCTATGGTCTTGAAAGCG CAGGAAGATAAAACCTATGCGGGAGCACTTATCGCCTCGTTATCCAATCCTTGGGGCGATACGGTTTCAGCAGCCGTGCC GAGTACTGGCTATAAAGCGGTATGGCCGCGTGACTTTTACCAATGTGCCATGGCATTCCTCGCCATGGGTGACACCCAAA CGCCCAAAGTGGCCTTCGAATACCTGAAAAAAGTGCAAGTGACCGAAATGACGCCCGGCTTTACGGGTACGCCGGGTTGG TTCCTGCAAAAGACCCATGTGGATGGCCAAATTGAGTGGGTTGGTGTGCAGCTCGATCAAACCGCCATGCCTATCATGCT CGGCTGGAAACTCTGGCAAGCGGGTGTGCTCACCCCTGATGAGATCAGTCACTGGTATCAAGAGATGCTCAAAGGTGCTG CAGACTTCTTGATCAGTGGCGGTGAGGTCAATCTGGATTGGAATCACACTCAAATCGCCCCGCCAAAAACCCAGCAAGAG CGTTGGGAAGAACAAGCGGGTTACTCACCCTCGACCACGGCCGCAGTGATCGCAGGTCTTGTTGCCGCGAGTGAAATAGC CAAAGAAGCCAAGGATCCCGACTCCAGCAGCCGTTATCTTGCAGCCGCCAAAGACTTAAGTAATAGTTTAGAAAAACACT TAGTCACCACCCAAGGACTACTAAAAAACAGCGCAGGCGTCAGCGCGCCTTACTATTTACGTTTAAGCCCAAATGGCGAG CCAAACACCAGCGATAGACTGGCGGCAAATAACGGTAAGCAAGGTTTAGATCAACGTCAGATCCTCGATGGCGGATTTTT AGAACTAGTACGTTATGGCGTGCGCGGTGCAACTGATAAGCTCATCAATCAAAGCCTTCAATTGATTGATAACACTGAAC TTGACTCTAATTTGCGCCTTAAATATGAGTTTACTGCCAAAGATGGCAGCAAAATCCCAGGCTTTAGACGTTATGGCAAC GATGGCTACGGTGAGGATACGGTTTCTGGCAAGAACTATGCGGAATCGGGCAGCAACAGCGCCGATCAACGTGGCCGCGT CTGGCCCTTCTTCACCGGTGAGCGCGGTCATTTTGAATTAGCACTCGCCCAAGAAAAAGGCGAGCTAACAGGCAATAACT CGCAGCAAACCAAGCAGCAGTTGATCAACACCTATGTGCAAGGCATGGAAACGTTTGCGAATGCGGGCATGATGTTACCC GAGCAAGCGTGGGACGGTGTCGGCGATGCCACCCGCTACCATTACCAACTCGGACAAGGCACTAACTCAGCCACGCCGCT AGCCTGGACCCATGCCGAATACATTAAACTGGTGCGCTCAATGACCGACGGCCAAGTCTGGGATAACTACCCTATCGTCC CAGCGGCATTGAAATAA
Upstream 100 bases:
>100_bases AAGCAAGGTGAACTTGGCCTGTTGGCGATTCACCGCAGCATGAAGCTTTTATATCAATTCAATCACTATAAAAATATAAC CATTATTTGGGGAGAACGAG
Downstream 100 bases:
>100_bases CGAGTTGAAGTGGCTTTTTGAAATAGTGTATTGAAATAGCGCATTGAAAAAATGTGCTGAAATAACACACTAAAACAGCG CATGAGCTTAACGATGCTTT
Product: glucan 1,4-alpha-glucosidase
Products: NA
Alternate protein names: 1,4-alpha-D-glucan glucohydrolase; Glucan 1,4-alpha-glucosidase [H]
Number of amino acids: Translated: 858; Mature: 858
Protein sequence:
>858_residues MESSPTPQQDLHTSQTRHAQTLTRRSRLALAVAASLLGTIGFTACSPTSNSATPSMSGNAASNVQLVAPGAPGKAPTWAF SGKTGIGTSYEPYTQGQYQDAKQNPISRVWFSLAQGILTETMYGLIHNAQLKELQFVITGNGFVDTEKDNTISSIEYLDT DANGRPQSLAYKIINKDIEGKYQIEKHIFTDPDRDTLMMRVTFTAFEDGITPHLYVNPHIDNAGANDIGRIDTNTDNHTN THAGNQALVAYTAAKDSSVMTVKSELNFVQATTGFVGVSDGLADLADNGKLDTPYQTTSTQDKSTVGNIAFTASYPTLIK AKPVTFNLVIGFGKDGAQSLANADATLAAGYDAVLSAYKGDATHVGWHDYLSSLPAIANMANNTTDSGKLLYTSAMVLKA QEDKTYAGALIASLSNPWGDTVSAAVPSTGYKAVWPRDFYQCAMAFLAMGDTQTPKVAFEYLKKVQVTEMTPGFTGTPGW FLQKTHVDGQIEWVGVQLDQTAMPIMLGWKLWQAGVLTPDEISHWYQEMLKGAADFLISGGEVNLDWNHTQIAPPKTQQE RWEEQAGYSPSTTAAVIAGLVAASEIAKEAKDPDSSSRYLAAAKDLSNSLEKHLVTTQGLLKNSAGVSAPYYLRLSPNGE PNTSDRLAANNGKQGLDQRQILDGGFLELVRYGVRGATDKLINQSLQLIDNTELDSNLRLKYEFTAKDGSKIPGFRRYGN DGYGEDTVSGKNYAESGSNSADQRGRVWPFFTGERGHFELALAQEKGELTGNNSQQTKQQLINTYVQGMETFANAGMMLP EQAWDGVGDATRYHYQLGQGTNSATPLAWTHAEYIKLVRSMTDGQVWDNYPIVPAALK
Sequences:
>Translated_858_residues MESSPTPQQDLHTSQTRHAQTLTRRSRLALAVAASLLGTIGFTACSPTSNSATPSMSGNAASNVQLVAPGAPGKAPTWAF SGKTGIGTSYEPYTQGQYQDAKQNPISRVWFSLAQGILTETMYGLIHNAQLKELQFVITGNGFVDTEKDNTISSIEYLDT DANGRPQSLAYKIINKDIEGKYQIEKHIFTDPDRDTLMMRVTFTAFEDGITPHLYVNPHIDNAGANDIGRIDTNTDNHTN THAGNQALVAYTAAKDSSVMTVKSELNFVQATTGFVGVSDGLADLADNGKLDTPYQTTSTQDKSTVGNIAFTASYPTLIK AKPVTFNLVIGFGKDGAQSLANADATLAAGYDAVLSAYKGDATHVGWHDYLSSLPAIANMANNTTDSGKLLYTSAMVLKA QEDKTYAGALIASLSNPWGDTVSAAVPSTGYKAVWPRDFYQCAMAFLAMGDTQTPKVAFEYLKKVQVTEMTPGFTGTPGW FLQKTHVDGQIEWVGVQLDQTAMPIMLGWKLWQAGVLTPDEISHWYQEMLKGAADFLISGGEVNLDWNHTQIAPPKTQQE RWEEQAGYSPSTTAAVIAGLVAASEIAKEAKDPDSSSRYLAAAKDLSNSLEKHLVTTQGLLKNSAGVSAPYYLRLSPNGE PNTSDRLAANNGKQGLDQRQILDGGFLELVRYGVRGATDKLINQSLQLIDNTELDSNLRLKYEFTAKDGSKIPGFRRYGN DGYGEDTVSGKNYAESGSNSADQRGRVWPFFTGERGHFELALAQEKGELTGNNSQQTKQQLINTYVQGMETFANAGMMLP EQAWDGVGDATRYHYQLGQGTNSATPLAWTHAEYIKLVRSMTDGQVWDNYPIVPAALK >Mature_858_residues MESSPTPQQDLHTSQTRHAQTLTRRSRLALAVAASLLGTIGFTACSPTSNSATPSMSGNAASNVQLVAPGAPGKAPTWAF SGKTGIGTSYEPYTQGQYQDAKQNPISRVWFSLAQGILTETMYGLIHNAQLKELQFVITGNGFVDTEKDNTISSIEYLDT DANGRPQSLAYKIINKDIEGKYQIEKHIFTDPDRDTLMMRVTFTAFEDGITPHLYVNPHIDNAGANDIGRIDTNTDNHTN THAGNQALVAYTAAKDSSVMTVKSELNFVQATTGFVGVSDGLADLADNGKLDTPYQTTSTQDKSTVGNIAFTASYPTLIK AKPVTFNLVIGFGKDGAQSLANADATLAAGYDAVLSAYKGDATHVGWHDYLSSLPAIANMANNTTDSGKLLYTSAMVLKA QEDKTYAGALIASLSNPWGDTVSAAVPSTGYKAVWPRDFYQCAMAFLAMGDTQTPKVAFEYLKKVQVTEMTPGFTGTPGW FLQKTHVDGQIEWVGVQLDQTAMPIMLGWKLWQAGVLTPDEISHWYQEMLKGAADFLISGGEVNLDWNHTQIAPPKTQQE RWEEQAGYSPSTTAAVIAGLVAASEIAKEAKDPDSSSRYLAAAKDLSNSLEKHLVTTQGLLKNSAGVSAPYYLRLSPNGE PNTSDRLAANNGKQGLDQRQILDGGFLELVRYGVRGATDKLINQSLQLIDNTELDSNLRLKYEFTAKDGSKIPGFRRYGN DGYGEDTVSGKNYAESGSNSADQRGRVWPFFTGERGHFELALAQEKGELTGNNSQQTKQQLINTYVQGMETFANAGMMLP EQAWDGVGDATRYHYQLGQGTNSATPLAWTHAEYIKLVRSMTDGQVWDNYPIVPAALK
Specific function: CGA has typical kinetic properties for a glucoamylase, but this bacterial enzyme had higher isomaltose-hydrolyzing activity than other eukaryotic glucoamylases [H]
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cell membrane; Lipid-anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 15 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR006425 - InterPro: IPR015220 - InterPro: IPR011013 - InterPro: IPR014718 - InterPro: IPR000165 - InterPro: IPR011613 [H]
Pfam domain/function: PF09137 Glucodextran_N; PF00723 Glyco_hydro_15 [H]
EC number: =3.2.1.3 [H]
Molecular weight: Translated: 93021; Mature: 93021
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESSPTPQQDLHTSQTRHAQTLTRRSRLALAVAASLLGTIGFTACSPTSNSATPSMSGNA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCC ASNVQLVAPGAPGKAPTWAFSGKTGIGTSYEPYTQGQYQDAKQNPISRVWFSLAQGILTE CCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHH TMYGLIHNAQLKELQFVITGNGFVDTEKDNTISSIEYLDTDANGRPQSLAYKIINKDIEG HHHHHHCCCCEEEEEEEEECCCEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCC KYQIEKHIFTDPDRDTLMMRVTFTAFEDGITPHLYVNPHIDNAGANDIGRIDTNTDNHTN CEEEEECCCCCCCCCEEEEEEEEEHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC THAGNQALVAYTAAKDSSVMTVKSELNFVQATTGFVGVSDGLADLADNGKLDTPYQTTST CCCCCEEEEEEEECCCCCEEEEHHHCCEEEECCCCEECCCCHHHHHCCCCCCCCCCCCCC QDKSTVGNIAFTASYPTLIKAKPVTFNLVIGFGKDGAQSLANADATLAAGYDAVLSAYKG CCCCCCCCEEEEECCCCEEEECCEEEEEEEEECCCHHHHHHCCCCHHHCCHHHHHHHHCC DATHVGWHDYLSSLPAIANMANNTTDSGKLLYTSAMVLKAQEDKTYAGALIASLSNPWGD CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCC TVSAAVPSTGYKAVWPRDFYQCAMAFLAMGDTQTPKVAFEYLKKVQVTEMTPGFTGTPGW CHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCEEEECCCCCCCCCCC FLQKTHVDGQIEWVGVQLDQTAMPIMLGWKLWQAGVLTPDEISHWYQEMLKGAADFLISG EEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEC GEVNLDWNHTQIAPPKTQQERWEEQAGYSPSTTAAVIAGLVAASEIAKEAKDPDSSSRYL CEEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AAAKDLSNSLEKHLVTTQGLLKNSAGVSAPYYLRLSPNGEPNTSDRLAANNGKQGLDQRQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCHHH ILDGGFLELVRYGVRGATDKLINQSLQLIDNTELDSNLRLKYEFTAKDGSKIPGFRRYGN HHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHHCCC DGYGEDTVSGKNYAESGSNSADQRGRVWPFFTGERGHFELALAQEKGELTGNNSQQTKQQ CCCCCCCCCCCCHHCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCHHHHHHH LINTYVQGMETFANAGMMLPEQAWDGVGDATRYHYQLGQGTNSATPLAWTHAEYIKLVRS HHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHH MTDGQVWDNYPIVPAALK CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MESSPTPQQDLHTSQTRHAQTLTRRSRLALAVAASLLGTIGFTACSPTSNSATPSMSGNA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCC ASNVQLVAPGAPGKAPTWAFSGKTGIGTSYEPYTQGQYQDAKQNPISRVWFSLAQGILTE CCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHH TMYGLIHNAQLKELQFVITGNGFVDTEKDNTISSIEYLDTDANGRPQSLAYKIINKDIEG HHHHHHCCCCEEEEEEEEECCCEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCC KYQIEKHIFTDPDRDTLMMRVTFTAFEDGITPHLYVNPHIDNAGANDIGRIDTNTDNHTN CEEEEECCCCCCCCCEEEEEEEEEHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC THAGNQALVAYTAAKDSSVMTVKSELNFVQATTGFVGVSDGLADLADNGKLDTPYQTTST CCCCCEEEEEEEECCCCCEEEEHHHCCEEEECCCCEECCCCHHHHHCCCCCCCCCCCCCC QDKSTVGNIAFTASYPTLIKAKPVTFNLVIGFGKDGAQSLANADATLAAGYDAVLSAYKG CCCCCCCCEEEEECCCCEEEECCEEEEEEEEECCCHHHHHHCCCCHHHCCHHHHHHHHCC DATHVGWHDYLSSLPAIANMANNTTDSGKLLYTSAMVLKAQEDKTYAGALIASLSNPWGD CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCC TVSAAVPSTGYKAVWPRDFYQCAMAFLAMGDTQTPKVAFEYLKKVQVTEMTPGFTGTPGW CHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCEEEECCCCCCCCCCC FLQKTHVDGQIEWVGVQLDQTAMPIMLGWKLWQAGVLTPDEISHWYQEMLKGAADFLISG EEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEC GEVNLDWNHTQIAPPKTQQERWEEQAGYSPSTTAAVIAGLVAASEIAKEAKDPDSSSRYL CEEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AAAKDLSNSLEKHLVTTQGLLKNSAGVSAPYYLRLSPNGEPNTSDRLAANNGKQGLDQRQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCHHH ILDGGFLELVRYGVRGATDKLINQSLQLIDNTELDSNLRLKYEFTAKDGSKIPGFRRYGN HHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHHCCC DGYGEDTVSGKNYAESGSNSADQRGRVWPFFTGERGHFELALAQEKGELTGNNSQQTKQQ CCCCCCCCCCCCHHCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCHHHHHHH LINTYVQGMETFANAGMMLPEQAWDGVGDATRYHYQLGQGTNSATPLAWTHAEYIKLVRS HHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHH MTDGQVWDNYPIVPAALK CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1633799 [H]