| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yjjI [H]
Identifier: 160875512
GI number: 160875512
Start: 2831803
End: 2833353
Strand: Direct
Name: yjjI [H]
Synonym: Sbal195_2400
Alternate gene names: 160875512
Gene position: 2831803-2833353 (Clockwise)
Preceding gene: 160875511
Following gene: 160875513
Centisome position: 52.96
GC content: 46.55
Gene sequence:
>1551_bases ATGTTATTACAAGATAAATTAGTGCAAATCGTCACCAACCCGCAGCTTTCACCTAAGCAAAAATCCAACTATTTGGCGTT GGAGGCAGAGGCGAGCTTGCCCTACATGCCGATATCGACTGAGGTAAAAGCCGCGATGAATGACGGCATTATCTGCGATA TGTTTGAAGGCCATGCGCCTTTTAAACCGCGCTATGTGTTGCCAGATTATGCCCGCTATCTAAAGCAAGGTTCAGAATAT TTAGAGCTTTCACCTGCGCAGGATTTAGATGAAGCCCTCAATGCTTTGACCATCCTTTATCACCACGTGCCATCGGTGAC CAATATCCCCGTGTATTTAGGTCAGCTGGATGAAATATTAATGCCTTTCATCGAAGAAATGGATGCGGAAGTCCTTTATC GTAAACTTAAATTGTTCTGGATCATGCTCGACCGAACCCTGCCCGATGCCTTTATGCATGTGAATATTGGCCCTACAGAT AACATCGTTTGCCGCACCCTACTGCGCATTGATGCCGAGTTAAAACAAGTTGCCCCCAATTTGACCTTTATGTACGACCC AGCCGTCACACCGGATGAATTGTTGTTGCTTGCGACCACCAATATTTGTCAGTGCAGTAAGCCGCATATCGCGAATTACC CTCTGCATTCCGGTGCGTTTGATGAGCGCGGTTTTGGTATTGTCAGTTGCTACAACGCGTTGCCGTTAGCGGGCGGCGCC AATACCTTAGTTCGACTTAATCTTAAAGAAGTTGCGTTAAAGGCCAATTCTATAAACGAATTTTTTGATACTGTATTGCC AAATTACTGCTCACTCACCTTTGAGCTCATTGAAGCGCGCTCGGCATTTTTGCATCAAGAATCACACTTCTTTGACAGCT TTTTAGTTAAAGAGCAATTGATTGATGAATCGCGCTTTGCACCCATGTTTGGTATTTACGGCATGGCGGAAGCGGTAAAT ATTCTGCAGGCATTAACAGCCTGTGGAGAAGTGATGCCAGCAATACACGCGAGATATGGCCATGAAACGGATGCAAATCA GCTGAGCTATCGCATTTCTGCCGCGCTAGATGCCATAGTGAAATCCACACCCGTTGCGCATGGCTTCCATGGACGAGCGC TGCTGCATTCACAGGGCGGTATTAGTATCGATAAAGATGTGACGCCTGGCGTTCGCATCCCCTATGGCACAGAACCCAAT CCCATCGCCCACATTCAAGCCCTAGCCCAACATCATCAGTATTATACGGCGGGTATTAGCGATATTTTGACTATCGATGA AACCGTAAAATCCAATCCACAAGCCATGTTCCAACTGTGTAAAGCGGCGCTTGAGTTAGGTTTTAGGGAATTTACCGCCA ATGTCGCCTCTAACGATTTAATACGCGTAACGGGCTATATGGTAAAACGCTCGGACATTGAAGCATTTAAGCAATGTGGC TCACGCCTCAATACCACAGGCTTAGCAGCAGAAGCGGTGGTTAATACGGGAATATTACAACGCCAAGCACGAGTCATCGC CCATGAACACTCCCCTTGTGTCTTTGAATAG
Upstream 100 bases:
>100_bases ATTTCCATTTCATCAATCAAGGCTGCGGCTATTTTCACTTTTTAAAGCCAGATACGCCCAGTAGATTAGTGGTCATCATA GAACTTGTGGATATTCCGCC
Downstream 100 bases:
>100_bases GCAAGTAATGGTCAGTCAGCTATTGCCCTTTTCCTGCGTTGACGGGCCTGGCAGCAGGCTCGTGTTATTCCTGCAGGGCT GCAACTATCAATGCAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MLLQDKLVQIVTNPQLSPKQKSNYLALEAEASLPYMPISTEVKAAMNDGIICDMFEGHAPFKPRYVLPDYARYLKQGSEY LELSPAQDLDEALNALTILYHHVPSVTNIPVYLGQLDEILMPFIEEMDAEVLYRKLKLFWIMLDRTLPDAFMHVNIGPTD NIVCRTLLRIDAELKQVAPNLTFMYDPAVTPDELLLLATTNICQCSKPHIANYPLHSGAFDERGFGIVSCYNALPLAGGA NTLVRLNLKEVALKANSINEFFDTVLPNYCSLTFELIEARSAFLHQESHFFDSFLVKEQLIDESRFAPMFGIYGMAEAVN ILQALTACGEVMPAIHARYGHETDANQLSYRISAALDAIVKSTPVAHGFHGRALLHSQGGISIDKDVTPGVRIPYGTEPN PIAHIQALAQHHQYYTAGISDILTIDETVKSNPQAMFQLCKAALELGFREFTANVASNDLIRVTGYMVKRSDIEAFKQCG SRLNTTGLAAEAVVNTGILQRQARVIAHEHSPCVFE
Sequences:
>Translated_516_residues MLLQDKLVQIVTNPQLSPKQKSNYLALEAEASLPYMPISTEVKAAMNDGIICDMFEGHAPFKPRYVLPDYARYLKQGSEY LELSPAQDLDEALNALTILYHHVPSVTNIPVYLGQLDEILMPFIEEMDAEVLYRKLKLFWIMLDRTLPDAFMHVNIGPTD NIVCRTLLRIDAELKQVAPNLTFMYDPAVTPDELLLLATTNICQCSKPHIANYPLHSGAFDERGFGIVSCYNALPLAGGA NTLVRLNLKEVALKANSINEFFDTVLPNYCSLTFELIEARSAFLHQESHFFDSFLVKEQLIDESRFAPMFGIYGMAEAVN ILQALTACGEVMPAIHARYGHETDANQLSYRISAALDAIVKSTPVAHGFHGRALLHSQGGISIDKDVTPGVRIPYGTEPN PIAHIQALAQHHQYYTAGISDILTIDETVKSNPQAMFQLCKAALELGFREFTANVASNDLIRVTGYMVKRSDIEAFKQCG SRLNTTGLAAEAVVNTGILQRQARVIAHEHSPCVFE >Mature_516_residues MLLQDKLVQIVTNPQLSPKQKSNYLALEAEASLPYMPISTEVKAAMNDGIICDMFEGHAPFKPRYVLPDYARYLKQGSEY LELSPAQDLDEALNALTILYHHVPSVTNIPVYLGQLDEILMPFIEEMDAEVLYRKLKLFWIMLDRTLPDAFMHVNIGPTD NIVCRTLLRIDAELKQVAPNLTFMYDPAVTPDELLLLATTNICQCSKPHIANYPLHSGAFDERGFGIVSCYNALPLAGGA NTLVRLNLKEVALKANSINEFFDTVLPNYCSLTFELIEARSAFLHQESHFFDSFLVKEQLIDESRFAPMFGIYGMAEAVN ILQALTACGEVMPAIHARYGHETDANQLSYRISAALDAIVKSTPVAHGFHGRALLHSQGGISIDKDVTPGVRIPYGTEPN PIAHIQALAQHHQYYTAGISDILTIDETVKSNPQAMFQLCKAALELGFREFTANVASNDLIRVTGYMVKRSDIEAFKQCG SRLNTTGLAAEAVVNTGILQRQARVIAHEHSPCVFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0521 [H]
Homologues:
Organism=Escherichia coli, GI1790840, Length=509, Percent_Identity=60.1178781925344, Blast_Score=648, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016905 [H]
Pfam domain/function: PF11230 DUF3029 [H]
EC number: NA
Molecular weight: Translated: 57288; Mature: 57288
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLQDKLVQIVTNPQLSPKQKSNYLALEAEASLPYMPISTEVKAAMNDGIICDMFEGHAP CCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCEEEEEECCCCC FKPRYVLPDYARYLKQGSEYLELSPAQDLDEALNALTILYHHVPSVTNIPVYLGQLDEIL CCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH MPFIEEMDAEVLYRKLKLFWIMLDRTLPDAFMHVNIGPTDNIVCRTLLRIDAELKQVAPN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC LTFMYDPAVTPDELLLLATTNICQCSKPHIANYPLHSGAFDERGFGIVSCYNALPLAGGA CEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHCCCCCCCCC NTLVRLNLKEVALKANSINEFFDTVLPNYCSLTFELIEARSAFLHQESHFFDSFLVKEQL CCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDESRFAPMFGIYGMAEAVNILQALTACGEVMPAIHARYGHETDANQLSYRISAALDAIV HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH KSTPVAHGFHGRALLHSQGGISIDKDVTPGVRIPYGTEPNPIAHIQALAQHHQYYTAGIS HCCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHH DILTIDETVKSNPQAMFQLCKAALELGFREFTANVASNDLIRVTGYMVKRSDIEAFKQCG HHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH SRLNTTGLAAEAVVNTGILQRQARVIAHEHSPCVFE HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLLQDKLVQIVTNPQLSPKQKSNYLALEAEASLPYMPISTEVKAAMNDGIICDMFEGHAP CCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCEEEEEECCCCC FKPRYVLPDYARYLKQGSEYLELSPAQDLDEALNALTILYHHVPSVTNIPVYLGQLDEIL CCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH MPFIEEMDAEVLYRKLKLFWIMLDRTLPDAFMHVNIGPTDNIVCRTLLRIDAELKQVAPN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC LTFMYDPAVTPDELLLLATTNICQCSKPHIANYPLHSGAFDERGFGIVSCYNALPLAGGA CEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHCCCCCCCCC NTLVRLNLKEVALKANSINEFFDTVLPNYCSLTFELIEARSAFLHQESHFFDSFLVKEQL CCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDESRFAPMFGIYGMAEAVNILQALTACGEVMPAIHARYGHETDANQLSYRISAALDAIV HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH KSTPVAHGFHGRALLHSQGGISIDKDVTPGVRIPYGTEPNPIAHIQALAQHHQYYTAGIS HCCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHH DILTIDETVKSNPQAMFQLCKAALELGFREFTANVASNDLIRVTGYMVKRSDIEAFKQCG HHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH SRLNTTGLAAEAVVNTGILQRQARVIAHEHSPCVFE HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 3019678 [H]