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The map label for this gene is yjjW [H]

Identifier: 160875513

GI number: 160875513

Start: 2833325

End: 2834221

Strand: Direct

Name: yjjW [H]

Synonym: Sbal195_2401

Alternate gene names: 160875513

Gene position: 2833325-2834221 (Clockwise)

Preceding gene: 160875512

Following gene: 160875517

Centisome position: 52.99

GC content: 48.05

Gene sequence:

>897_bases
ATGAACACTCCCCTTGTGTCTTTGAATAGGCAAGTAATGGTCAGTCAGCTATTGCCCTTTTCCTGCGTTGACGGGCCTGG
CAGCAGGCTCGTGTTATTCCTGCAGGGCTGCAACTATCAATGCAAAAACTGCCATAACCCACAAACCATAGGCTTATGCG
ATGCCTGTGGCGATTGTGTTGCCACCTGCCCTGACAATGCGCTGACCTTGATAAACCTCAATAACAAGCCTCGCATTAGC
TGGGATAGTGAGCGTTGTAGCCAATGCGATACCTGTCTTGCCGTGTGCCCGAAACAAGCGAGCCCTAAGGTCACGCATTA
CACAGTAGAAGAAATACTAGGGATTCTGCACAGTCAGCGTCACTTTATTAATGGTATTACCGTGAGCGGCGGCGAAGCGA
GCCTGCAATTGCCGTTCATTATTGCGTTGTTTAAAGGGATTAAGGCCTCTGAATCGTTATCACACTTAACGTGCATGCTC
GACACCAATGGCAGTTTGAGTCTAACCGGTTGGCATAAACTGCTGCCCTTTTTGGATGGCGCCATGGTGGATCTCAAAGC
GTGGCAGCAAGATACCCATAGATACATTACTGGTCGCAACAACCATGCCGTGTTCACATCCATTCAGCTATTGGCTCAAC
AGCAAAAACTGTATGAAGTAAGATTGCTGCATATTCCGAGCATCACGGATTATGAGGAAGAGATAGAAGCGCTAGCGACC
TATTTGCTTCAGCTAGGTGCGGATACACGGGTTAAATTAAACGCCTTTCACCACCATGGTGTTGTCGATGAAGCACTCAA
TTGGCCAAGCTGTAAACAAGCCGATATTGAACGCTTGGCCGCAAAGCTTGCAAAGCGAGGCGTCATTAATCTAATCTTGC
CCCCTTGCTATATTTAG

Upstream 100 bases:

>100_bases
GCATTTAAGCAATGTGGCTCACGCCTCAATACCACAGGCTTAGCAGCAGAAGCGGTGGTTAATACGGGAATATTACAACG
CCAAGCACGAGTCATCGCCC

Downstream 100 bases:

>100_bases
CGACTGCAAAGCAAAATTTGCTCGTACAGCCAGCGCAGCGCGGGATCTTTCATACTTTGTCTATGCCAAACGAAACTGTA
AGCCACTTTGCCATATTCTA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MNTPLVSLNRQVMVSQLLPFSCVDGPGSRLVLFLQGCNYQCKNCHNPQTIGLCDACGDCVATCPDNALTLINLNNKPRIS
WDSERCSQCDTCLAVCPKQASPKVTHYTVEEILGILHSQRHFINGITVSGGEASLQLPFIIALFKGIKASESLSHLTCML
DTNGSLSLTGWHKLLPFLDGAMVDLKAWQQDTHRYITGRNNHAVFTSIQLLAQQQKLYEVRLLHIPSITDYEEEIEALAT
YLLQLGADTRVKLNAFHHHGVVDEALNWPSCKQADIERLAAKLAKRGVINLILPPCYI

Sequences:

>Translated_298_residues
MNTPLVSLNRQVMVSQLLPFSCVDGPGSRLVLFLQGCNYQCKNCHNPQTIGLCDACGDCVATCPDNALTLINLNNKPRIS
WDSERCSQCDTCLAVCPKQASPKVTHYTVEEILGILHSQRHFINGITVSGGEASLQLPFIIALFKGIKASESLSHLTCML
DTNGSLSLTGWHKLLPFLDGAMVDLKAWQQDTHRYITGRNNHAVFTSIQLLAQQQKLYEVRLLHIPSITDYEEEIEALAT
YLLQLGADTRVKLNAFHHHGVVDEALNWPSCKQADIERLAAKLAKRGVINLILPPCYI
>Mature_298_residues
MNTPLVSLNRQVMVSQLLPFSCVDGPGSRLVLFLQGCNYQCKNCHNPQTIGLCDACGDCVATCPDNALTLINLNNKPRIS
WDSERCSQCDTCLAVCPKQASPKVTHYTVEEILGILHSQRHFINGITVSGGEASLQLPFIIALFKGIKASESLSHLTCML
DTNGSLSLTGWHKLLPFLDGAMVDLKAWQQDTHRYITGRNNHAVFTSIQLLAQQQKLYEVRLLHIPSITDYEEEIEALAT
YLLQLGADTRVKLNAFHHHGVVDEALNWPSCKQADIERLAAKLAKRGVINLILPPCYI

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1790839, Length=290, Percent_Identity=52.7586206896552, Blast_Score=313, Evalue=1e-86,
Organism=Escherichia coli, GI1787130, Length=246, Percent_Identity=26.4227642276423, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011352
- InterPro:   IPR001989
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 33020; Mature: 33020

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS01087 RADICAL_ACTIVATING ; PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPLVSLNRQVMVSQLLPFSCVDGPGSRLVLFLQGCNYQCKNCHNPQTIGLCDACGDCV
CCCCCCCCCHHHHHHHCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCEEEHHHHHCCHH
ATCPDNALTLINLNNKPRISWDSERCSQCDTCLAVCPKQASPKVTHYTVEEILGILHSQR
HCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHH
HFINGITVSGGEASLQLPFIIALFKGIKASESLSHLTCMLDTNGSLSLTGWHKLLPFLDG
HHHCCEEECCCCCEEEHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEECHHHHHHHHHCC
AMVDLKAWQQDTHRYITGRNNHAVFTSIQLLAQQQKLYEVRLLHIPSITDYEEEIEALAT
HHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHH
YLLQLGADTRVKLNAFHHHGVVDEALNWPSCKQADIERLAAKLAKRGVINLILPPCYI
HHHHHCCCCEEEEEEHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCC
>Mature Secondary Structure
MNTPLVSLNRQVMVSQLLPFSCVDGPGSRLVLFLQGCNYQCKNCHNPQTIGLCDACGDCV
CCCCCCCCCHHHHHHHCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCEEEHHHHHCCHH
ATCPDNALTLINLNNKPRISWDSERCSQCDTCLAVCPKQASPKVTHYTVEEILGILHSQR
HCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHH
HFINGITVSGGEASLQLPFIIALFKGIKASESLSHLTCMLDTNGSLSLTGWHKLLPFLDG
HHHCCEEECCCCCEEEHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEECHHHHHHHHHCC
AMVDLKAWQQDTHRYITGRNNHAVFTSIQLLAQQQKLYEVRLLHIPSITDYEEEIEALAT
HHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHH
YLLQLGADTRVKLNAFHHHGVVDEALNWPSCKQADIERLAAKLAKRGVINLILPPCYI
HHHHHCCCCEEEEEEHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]