| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is tusD [H]
Identifier: 160875426
GI number: 160875426
Start: 2734794
End: 2735183
Strand: Direct
Name: tusD [H]
Synonym: Sbal195_2314
Alternate gene names: 160875426
Gene position: 2734794-2735183 (Clockwise)
Preceding gene: 160875425
Following gene: 160875427
Centisome position: 51.14
GC content: 48.97
Gene sequence:
>390_bases ATGAGCAAATTTATTATCCAAGTGAACGGGCCCGCTTATGGCACGTCGGCGAGTGTTAACGCCTTACGCTTTTCCCAAGC TGCACTTTTGGCTGGGCATCAGATTATCTGTGTGTTTTTTTATCAAGACGGCGTGTATAACTCCACAGATTTAAGCTTAC CCGCCTCCGATGAAAACGATGTGATCAGTGACTGGAAACAGCTCGCGCAATCCCATCAGCTCCCGTTAGTCAATTGCGTT TCAGCAGCGCTGCGCCGTGGGATTTTAAGCAAGCAAGATGCCAGTGAGAATGGCCTAAGCCACTGGAATGTGGGCGAGTC ATTTATCATGGGCGGTTTAGGCGAGCTTGTCACCGGCATTGAATCGGCCGATCGTTTGATCAGTTTTTAA
Upstream 100 bases:
>100_bases GCACCTTATGGGCATAGGCAACGATGACTAATCCTAGTTAGCGATTTTTAGCTTAACTTGCGTTAGAATGGCCCTACTTT TAGGGCCATTTTTATTTTAA
Downstream 100 bases:
>100_bases CTTTCAGGGTGACTATGAAAAAATTGTGTATTCTATTTCGCTGTTCGCCACACGGTACTGTTCGTGGCCGCGAAGGTTTA GATCTCGCCCTGCTGAGCGC
Product: DsrE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSKFIIQVNGPAYGTSASVNALRFSQAALLAGHQIICVFFYQDGVYNSTDLSLPASDENDVISDWKQLAQSHQLPLVNCV SAALRRGILSKQDASENGLSHWNVGESFIMGGLGELVTGIESADRLISF
Sequences:
>Translated_129_residues MSKFIIQVNGPAYGTSASVNALRFSQAALLAGHQIICVFFYQDGVYNSTDLSLPASDENDVISDWKQLAQSHQLPLVNCV SAALRRGILSKQDASENGLSHWNVGESFIMGGLGELVTGIESADRLISF >Mature_128_residues SKFIIQVNGPAYGTSASVNALRFSQAALLAGHQIICVFFYQDGVYNSTDLSLPASDENDVISDWKQLAQSHQLPLVNCVS AALRRGILSKQDASENGLSHWNVGESFIMGGLGELVTGIESADRLISF
Specific function: Could be part of a sulfur-relay system [H]
COG id: COG1553
COG function: function code P; Uncharacterized conserved protein involved in intracellular sulfur reduction
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dsrE/tusD family [H]
Homologues:
Organism=Escherichia coli, GI1789743, Length=127, Percent_Identity=43.3070866141732, Blast_Score=118, Evalue=1e-28,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003787 - InterPro: IPR017463 [H]
Pfam domain/function: PF02635 DrsE [H]
EC number: NA
Molecular weight: Translated: 13891; Mature: 13760
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFIIQVNGPAYGTSASVNALRFSQAALLAGHQIICVFFYQDGVYNSTDLSLPASDEND CCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCH VISDWKQLAQSHQLPLVNCVSAALRRGILSKQDASENGLSHWNVGESFIMGGLGELVTGI HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHH ESADRLISF HHHHHHHCC >Mature Secondary Structure SKFIIQVNGPAYGTSASVNALRFSQAALLAGHQIICVFFYQDGVYNSTDLSLPASDEND CEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCH VISDWKQLAQSHQLPLVNCVSAALRRGILSKQDASENGLSHWNVGESFIMGGLGELVTGI HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHH ESADRLISF HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA