| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is tusC [H]
Identifier: 160875427
GI number: 160875427
Start: 2735198
End: 2735554
Strand: Direct
Name: tusC [H]
Synonym: Sbal195_2315
Alternate gene names: 160875427
Gene position: 2735198-2735554 (Clockwise)
Preceding gene: 160875426
Following gene: 160875428
Centisome position: 51.15
GC content: 46.22
Gene sequence:
>357_bases ATGAAAAAATTGTGTATTCTATTTCGCTGTTCGCCACACGGTACTGTTCGTGGCCGCGAAGGTTTAGATCTCGCCCTGCT GAGCGCCAGCTTTGAGCAAGAAGTGAGTTTAGTCTTTGTCGATGAAGGTGTGCTGCATTTGATTAAAGATCAACAGCCTG AGCTTATCGGCGCTAAAGATTACATCTCCACCTTTAAAGCACTGCCGCTGTACGATATCGAGTCGGTATTTGTCTGTAAG CAATCCTTAGCCGACTACGGCTTAAGCCATGGCTTACTGTCAGTTCCTGTTACTATGGTCAACGATGAGGCCATCGCTGC CCATTTAAAACAGGTGGATGAGGTCTTAGTATTCTGA
Upstream 100 bases:
>100_bases GGAATGTGGGCGAGTCATTTATCATGGGCGGTTTAGGCGAGCTTGTCACCGGCATTGAATCGGCCGATCGTTTGATCAGT TTTTAACTTTCAGGGTGACT
Downstream 100 bases:
>100_bases TGATTTTACATCATATTCAAACATCTCCCAGCCGAGATAGTGCGTTGAAACTCTGCTTACGTTACGCCTGTAAGGAAGAT GCGATTCTACTATCGAGCGA
Product: DsrE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKKLCILFRCSPHGTVRGREGLDLALLSASFEQEVSLVFVDEGVLHLIKDQQPELIGAKDYISTFKALPLYDIESVFVCK QSLADYGLSHGLLSVPVTMVNDEAIAAHLKQVDEVLVF
Sequences:
>Translated_118_residues MKKLCILFRCSPHGTVRGREGLDLALLSASFEQEVSLVFVDEGVLHLIKDQQPELIGAKDYISTFKALPLYDIESVFVCK QSLADYGLSHGLLSVPVTMVNDEAIAAHLKQVDEVLVF >Mature_118_residues MKKLCILFRCSPHGTVRGREGLDLALLSASFEQEVSLVFVDEGVLHLIKDQQPELIGAKDYISTFKALPLYDIESVFVCK QSLADYGLSHGLLSVPVTMVNDEAIAAHLKQVDEVLVF
Specific function: Could be part of a sulfur-relay system [H]
COG id: COG2923
COG function: function code P; Uncharacterized protein involved in the oxidation of intracellular sulfur
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dsrF/tusC family [H]
Homologues:
Organism=Escherichia coli, GI1789742, Length=119, Percent_Identity=38.655462184874, Blast_Score=92, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003787 - InterPro: IPR017462 [H]
Pfam domain/function: PF02635 DrsE [H]
EC number: NA
Molecular weight: Translated: 13033; Mature: 13033
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLCILFRCSPHGTVRGREGLDLALLSASFEQEVSLVFVDEGVLHLIKDQQPELIGAKD CCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCHHHHHCCCCCCEECHHH YISTFKALPLYDIESVFVCKQSLADYGLSHGLLSVPVTMVNDEAIAAHLKQVDEVLVF HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCEEEECCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKLCILFRCSPHGTVRGREGLDLALLSASFEQEVSLVFVDEGVLHLIKDQQPELIGAKD CCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCHHHHHCCCCCCEECHHH YISTFKALPLYDIESVFVCKQSLADYGLSHGLLSVPVTMVNDEAIAAHLKQVDEVLVF HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCEEEECCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]