| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875419
Identifier: 160875419
GI number: 160875419
Start: 2727297
End: 2728055
Strand: Direct
Name: 160875419
Synonym: Sbal195_2307
Alternate gene names: NA
Gene position: 2727297-2728055 (Clockwise)
Preceding gene: 160875416
Following gene: 160875421
Centisome position: 51.0
GC content: 49.41
Gene sequence:
>759_bases ATGCCCTCTTCATGGTTTTTCTTTGATGCGATCCCCGCCGATATATTTGCCCTACTCACCCTAAGCGCCGCATTTACCTC TTTTTTTACTGCCTGCTTTGGCATTGGTGGTGGCGTCATGCTTTTAGGCGTGATGGCGCAAGTGTTACCGCCGCAATTGA TTATTCCATTGCATGGCGTGGTGCAATTGGGCTCGAACGGTGGCCGTGCTGCTCTGGGCTGGCGCCATATCGAATGGCGA CTTATAGCGGCATTTTTCCCCGGTGCAATATTAGGGGCATTATTGGGGAGTCTTGTGTTAGTGGCGCTGCCACCATCAGT TATGTATCTCACCATTGCTGCATTTATTTTTTATTCATGTTGGGGTCCCAAACTGCCAAAAATGGTGTTTGGTACTTTAG GGACGCTTGCCGCAGGCGCAATAACCACGTTTATCTCGTTATTTGCTGGTGCTACTGGGCCATTAGTTGCGGCGTTTATT AAACAATTGGAAGTTGACCGTTTTCGCACCGTCGCAACCTTTGCCTTGGCGATGTCACTGCAGCACGGGGTTAAAATTGT GGTGTATGAAGGCATGGGGGTGACGCTAGCAGATTGGTGGCCGCTGTTGGTGTGCATGATTTTAAGCGGCACCGTAGGCA CGTGGATTGGGTTTAAAATGCTGAAACGTGTCGCCGATAAACATTTTCAAACGGCCTTTAGCATTGTACTGACGCTGTTG GCCATTCGATTAATTTGGCAGGCGATTAGCCAGTGGTAG
Upstream 100 bases:
>100_bases TCCAATGACTCAAGGCTGTGCTAAGTGACAGCTTATGAGCTTTGAAAGCCTCAAGCGATTTTGCTACTGTTAGCACCCTC ACACTTTTCGAATACGACTT
Downstream 100 bases:
>100_bases AGGCATAAAAAAAGCAGTAACTGAATCAGTTACTGCTTAGCGCCGAGCAACGCTGGCTCAACCAAGATGTCGTTAAGCGA CCTCAACTCAAACGACATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Orphan Protein; Conserved Domain Protein
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MPSSWFFFDAIPADIFALLTLSAAFTSFFTACFGIGGGVMLLGVMAQVLPPQLIIPLHGVVQLGSNGGRAALGWRHIEWR LIAAFFPGAILGALLGSLVLVALPPSVMYLTIAAFIFYSCWGPKLPKMVFGTLGTLAAGAITTFISLFAGATGPLVAAFI KQLEVDRFRTVATFALAMSLQHGVKIVVYEGMGVTLADWWPLLVCMILSGTVGTWIGFKMLKRVADKHFQTAFSIVLTLL AIRLIWQAISQW
Sequences:
>Translated_252_residues MPSSWFFFDAIPADIFALLTLSAAFTSFFTACFGIGGGVMLLGVMAQVLPPQLIIPLHGVVQLGSNGGRAALGWRHIEWR LIAAFFPGAILGALLGSLVLVALPPSVMYLTIAAFIFYSCWGPKLPKMVFGTLGTLAAGAITTFISLFAGATGPLVAAFI KQLEVDRFRTVATFALAMSLQHGVKIVVYEGMGVTLADWWPLLVCMILSGTVGTWIGFKMLKRVADKHFQTAFSIVLTLL AIRLIWQAISQW >Mature_251_residues PSSWFFFDAIPADIFALLTLSAAFTSFFTACFGIGGGVMLLGVMAQVLPPQLIIPLHGVVQLGSNGGRAALGWRHIEWRL IAAFFPGAILGALLGSLVLVALPPSVMYLTIAAFIFYSCWGPKLPKMVFGTLGTLAAGAITTFISLFAGATGPLVAAFIK QLEVDRFRTVATFALAMSLQHGVKIVVYEGMGVTLADWWPLLVCMILSGTVGTWIGFKMLKRVADKHFQTAFSIVLTLLA IRLIWQAISQW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27157; Mature: 27026
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSWFFFDAIPADIFALLTLSAAFTSFFTACFGIGGGVMLLGVMAQVLPPQLIIPLHGV CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEECHHHH VQLGSNGGRAALGWRHIEWRLIAAFFPGAILGALLGSLVLVALPPSVMYLTIAAFIFYSC HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH WGPKLPKMVFGTLGTLAAGAITTFISLFAGATGPLVAAFIKQLEVDRFRTVATFALAMSL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QHGVKIVVYEGMGVTLADWWPLLVCMILSGTVGTWIGFKMLKRVADKHFQTAFSIVLTLL HCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIRLIWQAISQW HHHHHHHHHHCC >Mature Secondary Structure PSSWFFFDAIPADIFALLTLSAAFTSFFTACFGIGGGVMLLGVMAQVLPPQLIIPLHGV CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEECHHHH VQLGSNGGRAALGWRHIEWRLIAAFFPGAILGALLGSLVLVALPPSVMYLTIAAFIFYSC HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH WGPKLPKMVFGTLGTLAAGAITTFISLFAGATGPLVAAFIKQLEVDRFRTVATFALAMSL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QHGVKIVVYEGMGVTLADWWPLLVCMILSGTVGTWIGFKMLKRVADKHFQTAFSIVLTLL HCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIRLIWQAISQW HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA