| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875338
Identifier: 160875338
GI number: 160875338
Start: 2641910
End: 2642350
Strand: Reverse
Name: 160875338
Synonym: Sbal195_2225
Alternate gene names: NA
Gene position: 2642350-2641910 (Counterclockwise)
Preceding gene: 160875339
Following gene: 160875335
Centisome position: 49.41
GC content: 29.71
Gene sequence:
>441_bases ATGACATTTTTAAGTTCTTTAAGTCAACAATGGGAGAAGTCTTGTTTAGGTCATGCGTTAAGCCAGAAATTCATGATTTA TAGTCAAATAAATCAGTTTTTTACTGGTGCAACAAACCTGAACTCAGTAACGTGTATAATGGCAGCATTAGTATATAATG AAGGTAGTCCAGAATGGTTGCCAAAAAAAATAAATTATAAAAATTTATCAGATGAACAAATTTTAAATTGCCTACTAATT AGCTGTCAACTGTTATTCATAAAAGCTGTAGAAGGAAATGAACTCAGCCAATGTGAAAGATTAATATTTACATTGTCCAA TATTTGGGTGAATAACTTCTCACCTAAACATACTTATATTGGCAACTTAATAAATAAGATATGTCATCAACTAGATGACA TATCCTTTGAAACCAGATTGAAAAACAAGTCAATGATATAA
Upstream 100 bases:
>100_bases AAAGGATTTTCAGGGTTAGGGTTGGAGTTTTTTGAATATTTAATTAACGCTTTTAATTTACAAATTAAAATACGAAGCAT TTATCGCTGAGGTTAAAATA
Downstream 100 bases:
>100_bases TTTATGTTAAGCACATTAACCAGACTATATAAATCTGATTTATGGGTACGATTTAAGACTAAACGACCGTTATGATATCT ATGGTCAACGACAGACTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTFLSSLSQQWEKSCLGHALSQKFMIYSQINQFFTGATNLNSVTCIMAALVYNEGSPEWLPKKINYKNLSDEQILNCLLI SCQLLFIKAVEGNELSQCERLIFTLSNIWVNNFSPKHTYIGNLINKICHQLDDISFETRLKNKSMI
Sequences:
>Translated_146_residues MTFLSSLSQQWEKSCLGHALSQKFMIYSQINQFFTGATNLNSVTCIMAALVYNEGSPEWLPKKINYKNLSDEQILNCLLI SCQLLFIKAVEGNELSQCERLIFTLSNIWVNNFSPKHTYIGNLINKICHQLDDISFETRLKNKSMI >Mature_145_residues TFLSSLSQQWEKSCLGHALSQKFMIYSQINQFFTGATNLNSVTCIMAALVYNEGSPEWLPKKINYKNLSDEQILNCLLIS CQLLFIKAVEGNELSQCERLIFTLSNIWVNNFSPKHTYIGNLINKICHQLDDISFETRLKNKSMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16762; Mature: 16630
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLSSLSQQWEKSCLGHALSQKFMIYSQINQFFTGATNLNSVTCIMAALVYNEGSPEWL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC PKKINYKNLSDEQILNCLLISCQLLFIKAVEGNELSQCERLIFTLSNIWVNNFSPKHTYI CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH GNLINKICHQLDDISFETRLKNKSMI HHHHHHHHHHHHCCCHHHHHCCCCCC >Mature Secondary Structure TFLSSLSQQWEKSCLGHALSQKFMIYSQINQFFTGATNLNSVTCIMAALVYNEGSPEWL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC PKKINYKNLSDEQILNCLLISCQLLFIKAVEGNELSQCERLIFTLSNIWVNNFSPKHTYI CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH GNLINKICHQLDDISFETRLKNKSMI HHHHHHHHHHHHCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA