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The map label for this gene is ynfI [C]

Identifier: 160875339

GI number: 160875339

Start: 2642361

End: 2643026

Strand: Reverse

Name: ynfI [C]

Synonym: Sbal195_2226

Alternate gene names: 160875339

Gene position: 2643026-2642361 (Counterclockwise)

Preceding gene: 160875340

Following gene: 160875338

Centisome position: 49.43

GC content: 30.93

Gene sequence:

>666_bases
ATGAAAAAAATTAATCTTGAAACACTCAATGAATTGAAAGCTATATCAAATATTTTACACTCAGTACTGATGTTGTATCC
TGAGGCAGAATTACTAAATCAGTTCAAAAAACAAAACATAGTCAAAGAATGGCCAAGACTAACTAATTCAAAAAAAGAAT
CACAGGCTTTAGATGAACTTTCTCGATTTCTAACACAATGGAATGATAAAAATGATGAACTCATTAAGCTTAAATTAGAT
TATGGAATGGTTTTTTATGGTCCAAATACTCCAAAAGCAACACCTTGGGGGTCAACCTATTTATCACCTTCGCAGCTTTT
AAATGACAGTAGCACTATTGAGTTAAAACAATTTTACGTTCAACATGGAATCAATATTAAAACCGAAGTGAATGAACCCA
TTGATCATATAGGATTGTTTATGGCTGTATTAAGTTTTCTACTAGAGAAAATAATAGAAAACCCAGATATTGATGATTAT
AAATTGGTTTTCAATGAGCTGCTAGAAGTTCATTTATTGCCTTGGGGTAAGCGATGTTTACAGTTAGCCAGTGAAAGCTC
AAGTTCAGATTATTATAAAGGATTTTCAGGGTTAGGGTTGGAGTTTTTTGAATATTTAATTAACGCTTTTAATTTACAAA
TTAAAATACGAAGCATTTATCGCTGA

Upstream 100 bases:

>100_bases
TGATGGTAGGGTGTTGAATATACGCGAAGTTTAATTGCCATCTAAGTTAAGGTGCAATGTAAATTGCACCTTTTAATTAT
AAAAAGATAAGTTAATCTTT

Downstream 100 bases:

>100_bases
GGTTAAAATAATGACATTTTTAAGTTCTTTAAGTCAACAATGGGAGAAGTCTTGTTTAGGTCATGCGTTAAGCCAGAAAT
TCATGATTTATAGTCAAATA

Product: cytoplasmic chaperone TorD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKKINLETLNELKAISNILHSVLMLYPEAELLNQFKKQNIVKEWPRLTNSKKESQALDELSRFLTQWNDKNDELIKLKLD
YGMVFYGPNTPKATPWGSTYLSPSQLLNDSSTIELKQFYVQHGINIKTEVNEPIDHIGLFMAVLSFLLEKIIENPDIDDY
KLVFNELLEVHLLPWGKRCLQLASESSSSDYYKGFSGLGLEFFEYLINAFNLQIKIRSIYR

Sequences:

>Translated_221_residues
MKKINLETLNELKAISNILHSVLMLYPEAELLNQFKKQNIVKEWPRLTNSKKESQALDELSRFLTQWNDKNDELIKLKLD
YGMVFYGPNTPKATPWGSTYLSPSQLLNDSSTIELKQFYVQHGINIKTEVNEPIDHIGLFMAVLSFLLEKIIENPDIDDY
KLVFNELLEVHLLPWGKRCLQLASESSSSDYYKGFSGLGLEFFEYLINAFNLQIKIRSIYR
>Mature_221_residues
MKKINLETLNELKAISNILHSVLMLYPEAELLNQFKKQNIVKEWPRLTNSKKESQALDELSRFLTQWNDKNDELIKLKLD
YGMVFYGPNTPKATPWGSTYLSPSQLLNDSSTIELKQFYVQHGINIKTEVNEPIDHIGLFMAVLSFLLEKIIENPDIDDY
KLVFNELLEVHLLPWGKRCLQLASESSSSDYYKGFSGLGLEFFEYLINAFNLQIKIRSIYR

Specific function: Unknown

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family. DmsD subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081942, Length=141, Percent_Identity=25.531914893617, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020945 [H]

Pfam domain/function: PF02613 Nitrate_red_del [H]

EC number: NA

Molecular weight: Translated: 25686; Mature: 25686

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKINLETLNELKAISNILHSVLMLYPEAELLNQFKKQNIVKEWPRLTNSKKESQALDEL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SRFLTQWNDKNDELIKLKLDYGMVFYGPNTPKATPWGSTYLSPSQLLNDSSTIELKQFYV
HHHHHHCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
QHGINIKTEVNEPIDHIGLFMAVLSFLLEKIIENPDIDDYKLVFNELLEVHLLPWGKRCL
HHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH
QLASESSSSDYYKGFSGLGLEFFEYLINAFNLQIKIRSIYR
HHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHEEEEEECCC
>Mature Secondary Structure
MKKINLETLNELKAISNILHSVLMLYPEAELLNQFKKQNIVKEWPRLTNSKKESQALDEL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SRFLTQWNDKNDELIKLKLDYGMVFYGPNTPKATPWGSTYLSPSQLLNDSSTIELKQFYV
HHHHHHCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
QHGINIKTEVNEPIDHIGLFMAVLSFLLEKIIENPDIDDYKLVFNELLEVHLLPWGKRCL
HHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH
QLASESSSSDYYKGFSGLGLEFFEYLINAFNLQIKIRSIYR
HHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]