| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875246
Identifier: 160875246
GI number: 160875246
Start: 2538535
End: 2538831
Strand: Direct
Name: 160875246
Synonym: Sbal195_2133
Alternate gene names: NA
Gene position: 2538535-2538831 (Clockwise)
Preceding gene: 160875245
Following gene: 160875247
Centisome position: 47.47
GC content: 55.89
Gene sequence:
>297_bases ATGGCGATGCAGCAAATTATCAATGAGCACCAACGCCTTGTGGTGCTTCGATTACTGATCGAGGCGGGAGCCTTCGCACT CAATGAGTCCATCTTACAAGATGGCTTAAATGCCTACGGCCTCGACATTAGCCGCGATGCCTTGCTGGTGCAGCTCGCTT GGCTTAACGAGCAAGGGCTGATTAAAACCGAACTGGTTGGCAAAGTGACCACGGCTACGCTAACAGGTCGTGGCCAAGAT GTGGCGACAGGCCGCGCGATTGTGCCAGGGGTTAAACGCCCGCGGGCGGGAGAGTAG
Upstream 100 bases:
>100_bases GTTTAGGTGAGCGCTTTGGCGCAATGGAACAAGGCATTAGGCGCTTAGAAACCAAGACCGACATGCTTCTCGAAAACGAA CTTAAAGGAGGCCACCAATA
Downstream 100 bases:
>100_bases CCATGGCGAGTGAAACCCGAGGCCGACGCTCTAAGGTGGATTTACTGCCTGATCCTATCCGCAAGAAGCTCGATGCGGGG CTGCGTAATGGCTCGATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MAMQQIINEHQRLVVLRLLIEAGAFALNESILQDGLNAYGLDISRDALLVQLAWLNEQGLIKTELVGKVTTATLTGRGQD VATGRAIVPGVKRPRAGE
Sequences:
>Translated_98_residues MAMQQIINEHQRLVVLRLLIEAGAFALNESILQDGLNAYGLDISRDALLVQLAWLNEQGLIKTELVGKVTTATLTGRGQD VATGRAIVPGVKRPRAGE >Mature_97_residues AMQQIINEHQRLVVLRLLIEAGAFALNESILQDGLNAYGLDISRDALLVQLAWLNEQGLIKTELVGKVTTATLTGRGQDV ATGRAIVPGVKRPRAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013668 [H]
Pfam domain/function: PF08461 HTH_12 [H]
EC number: NA
Molecular weight: Translated: 10591; Mature: 10459
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMQQIINEHQRLVVLRLLIEAGAFALNESILQDGLNAYGLDISRDALLVQLAWLNEQGL CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCC IKTELVGKVTTATLTGRGQDVATGRAIVPGVKRPRAGE CHHHHHHHHHEEEECCCCCCCCCCCEECCCCCCCCCCC >Mature Secondary Structure AMQQIINEHQRLVVLRLLIEAGAFALNESILQDGLNAYGLDISRDALLVQLAWLNEQGL CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCC IKTELVGKVTTATLTGRGQDVATGRAIVPGVKRPRAGE CHHHHHHHHHEEEECCCCCCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]