| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875247
Identifier: 160875247
GI number: 160875247
Start: 2538834
End: 2539403
Strand: Direct
Name: 160875247
Synonym: Sbal195_2134
Alternate gene names: NA
Gene position: 2538834-2539403 (Clockwise)
Preceding gene: 160875246
Following gene: 160875248
Centisome position: 47.48
GC content: 54.21
Gene sequence:
>570_bases ATGGCGAGTGAAACCCGAGGCCGACGCTCTAAGGTGGATTTACTGCCTGATCCTATCCGCAAGAAGCTCGATGCGGGGCT GCGTAATGGCTCGATTCAGCAGATTGATTTGCTCGATGAAATCAATGCGCTGATTAAAGCCGCAGGGCTACCAGAAGAAC AGCAGCTTTCCCGCGCAGGTATTAACCGCTATGCCACCAAGATGGAGGCCGTGGGTAAATCCCTGCGTGAAATGCGTGAG ATCACCCAAGTGTGGACGGCAGAGCTAGGCGATAAACCGACGGGTGAAGTGACCAAACTCATCCTCGAAATGGCGCGTTC GCAGCTGTTTAAAGCCCTATTAAACCAAGATGAAACGGGCGAAGGTGCCGACGTGGGCATGATTAAAGATGCCATGTTAG CGGTGCAACGTTTGGAGTCTGCCGCCATGGCCAGCCATAAACGTGAGAAAGAGATCCGCACCGCGTTCGCGGCCGAAGCG GCTAATGCCGCCGAGAAGGTTGCGAAAACCGCTGGCTTAACCAGTGATGCCGTTGCCTTGCTTAAGCGTGAAATACTGGG GATTGCCTGA
Upstream 100 bases:
>100_bases GCAAAGTGACCACGGCTACGCTAACAGGTCGTGGCCAAGATGTGGCGACAGGCCGCGCGATTGTGCCAGGGGTTAAACGC CCGCGGGCGGGAGAGTAGCC
Downstream 100 bases:
>100_bases TGACCATTAAAAAAAAGGTGTTAGCGGCCGCGACTGCGGTAGCGCTAGCCATCACGCCAACGGCAAGCAGCTTTGATCCC ACGTATGAGGCAAGTTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MASETRGRRSKVDLLPDPIRKKLDAGLRNGSIQQIDLLDEINALIKAAGLPEEQQLSRAGINRYATKMEAVGKSLREMRE ITQVWTAELGDKPTGEVTKLILEMARSQLFKALLNQDETGEGADVGMIKDAMLAVQRLESAAMASHKREKEIRTAFAAEA ANAAEKVAKTAGLTSDAVALLKREILGIA
Sequences:
>Translated_189_residues MASETRGRRSKVDLLPDPIRKKLDAGLRNGSIQQIDLLDEINALIKAAGLPEEQQLSRAGINRYATKMEAVGKSLREMRE ITQVWTAELGDKPTGEVTKLILEMARSQLFKALLNQDETGEGADVGMIKDAMLAVQRLESAAMASHKREKEIRTAFAAEA ANAAEKVAKTAGLTSDAVALLKREILGIA >Mature_188_residues ASETRGRRSKVDLLPDPIRKKLDAGLRNGSIQQIDLLDEINALIKAAGLPEEQQLSRAGINRYATKMEAVGKSLREMREI TQVWTAELGDKPTGEVTKLILEMARSQLFKALLNQDETGEGADVGMIKDAMLAVQRLESAAMASHKREKEIRTAFAAEAA NAAEKVAKTAGLTSDAVALLKREILGIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage Mu protein gp27 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021874 [H]
Pfam domain/function: PF11985 DUF3486 [H]
EC number: NA
Molecular weight: Translated: 20524; Mature: 20393
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASETRGRRSKVDLLPDPIRKKLDAGLRNGSIQQIDLLDEINALIKAAGLPEEQQLSRAG CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH INRYATKMEAVGKSLREMREITQVWTAELGDKPTGEVTKLILEMARSQLFKALLNQDETG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC EGADVGMIKDAMLAVQRLESAAMASHKREKEIRTAFAAEAANAAEKVAKTAGLTSDAVAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LKREILGIA HHHHHHCCC >Mature Secondary Structure ASETRGRRSKVDLLPDPIRKKLDAGLRNGSIQQIDLLDEINALIKAAGLPEEQQLSRAG CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH INRYATKMEAVGKSLREMREITQVWTAELGDKPTGEVTKLILEMARSQLFKALLNQDETG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC EGADVGMIKDAMLAVQRLESAAMASHKREKEIRTAFAAEAANAAEKVAKTAGLTSDAVAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LKREILGIA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]