| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160875229
Identifier: 160875229
GI number: 160875229
Start: 2530065
End: 2530787
Strand: Direct
Name: 160875229
Synonym: Sbal195_2116
Alternate gene names: NA
Gene position: 2530065-2530787 (Clockwise)
Preceding gene: 160875228
Following gene: 160875230
Centisome position: 47.31
GC content: 49.52
Gene sequence:
>723_bases ATGAAAGCAGTGATCGCACCTGTAAAAAATGTCCTGACAGCCCAAGACGCCTTCGACAACCTTTGTACCCGAGGCATAGG TGTACCAGGTCTCGGTTTGTACCATGGCCCAAGTGGCTTTGGTAAAACAACTGCAACCACTTATCTGTTTAACCAAGTGA ACGGTATCTATGTTCGAGCCATGGCAACAGACAGTGCCAGTACGCTTATGAACCGCATTGTCGGCGAACTCGGATCGAGC GGCATGTGGCGCATCAATAAGATGGTCGATTTCACTATTGAGCAAATGAGCATGTACGAACGCCCGCTGTTTATCGATGA AGCCGACTACCTCATGTCAGACGTTCGTATGCTTGAAACCGTGCGCGATCTCTACGACAACACCGAAGTTCCTGTGATCC TCATTGGTATGGACCAAATCGCCCGCCGTATCAGCACACGCAAACAGTTCTTTAACCGTATTTCAGAGTGGGTTGAGTTT CGACCAGCCGACTTAGATGACGTCATGGTGATGGCCGATTCCCTCTTAGACAACGACATCAAAGTCGAACCAGAACTCCT TGATGAACTGCGTAAAGCCAGCAGTGGTGAGGCTCGTCGCATTGTCATTGGCCTTAATCAAATCGAACGTCTCGCCAAAA TGAACGAACTTGATTACGTCACAGCAGAACACTGGGGGGCACAGCCATTCCATGGTGTTCGACGTCCAAGCCTTGTGGGT TAA
Upstream 100 bases:
>100_bases TGATGAAATCATGGGCCATAAGCGCAGAGCGACCAACTGAGCACTTATGACCCACAACGGCCATGAAGGCCATAAAACTA AAGCAAATGGAGTATACAAA
Downstream 100 bases:
>100_bases GCGTTATGGCACAAGTCAAACGTTCAACCCCGTTAAGGCACAGCGCATGGTTGTTTATGTGCTGCTGTCGCAATCGAAAA GTCAGTTTTAGTGCTGAACA
Product: prophage MuSo1, DNA transposition protein
Products: NA
Alternate protein names: Prophage MuSo1 DNA Transposition Protein; Transposase Protein B; Prophage; DNA Transposition Protein; AAA ATPase Family Protein; Phage Transposition Protein B; AAA-Superfamily Of ATPases Protein; AAA ATPase; Prophage Mu DNA Transposition Protein B; B Protein
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MKAVIAPVKNVLTAQDAFDNLCTRGIGVPGLGLYHGPSGFGKTTATTYLFNQVNGIYVRAMATDSASTLMNRIVGELGSS GMWRINKMVDFTIEQMSMYERPLFIDEADYLMSDVRMLETVRDLYDNTEVPVILIGMDQIARRISTRKQFFNRISEWVEF RPADLDDVMVMADSLLDNDIKVEPELLDELRKASSGEARRIVIGLNQIERLAKMNELDYVTAEHWGAQPFHGVRRPSLVG
Sequences:
>Translated_240_residues MKAVIAPVKNVLTAQDAFDNLCTRGIGVPGLGLYHGPSGFGKTTATTYLFNQVNGIYVRAMATDSASTLMNRIVGELGSS GMWRINKMVDFTIEQMSMYERPLFIDEADYLMSDVRMLETVRDLYDNTEVPVILIGMDQIARRISTRKQFFNRISEWVEF RPADLDDVMVMADSLLDNDIKVEPELLDELRKASSGEARRIVIGLNQIERLAKMNELDYVTAEHWGAQPFHGVRRPSLVG >Mature_240_residues MKAVIAPVKNVLTAQDAFDNLCTRGIGVPGLGLYHGPSGFGKTTATTYLFNQVNGIYVRAMATDSASTLMNRIVGELGSS GMWRINKMVDFTIEQMSMYERPLFIDEADYLMSDVRMLETVRDLYDNTEVPVILIGMDQIARRISTRKQFFNRISEWVEF RPADLDDVMVMADSLLDNDIKVEPELLDELRKASSGEARRIVIGLNQIERLAKMNELDYVTAEHWGAQPFHGVRRPSLVG
Specific function: Unknown
COG id: COG2842
COG function: function code R; Uncharacterized ATPase, putative transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27042; Mature: 27042
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVIAPVKNVLTAQDAFDNLCTRGIGVPGLGLYHGPSGFGKTTATTYLFNQVNGIYVRA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEE MATDSASTLMNRIVGELGSSGMWRINKMVDFTIEQMSMYERPLFIDEADYLMSDVRMLET EECCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHH VRDLYDNTEVPVILIGMDQIARRISTRKQFFNRISEWVEFRPADLDDVMVMADSLLDNDI HHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC KVEPELLDELRKASSGEARRIVIGLNQIERLAKMNELDYVTAEHWGAQPFHGVRRPSLVG CCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCEEHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKAVIAPVKNVLTAQDAFDNLCTRGIGVPGLGLYHGPSGFGKTTATTYLFNQVNGIYVRA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEE MATDSASTLMNRIVGELGSSGMWRINKMVDFTIEQMSMYERPLFIDEADYLMSDVRMLET EECCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHH VRDLYDNTEVPVILIGMDQIARRISTRKQFFNRISEWVEFRPADLDDVMVMADSLLDNDI HHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC KVEPELLDELRKASSGEARRIVIGLNQIERLAKMNELDYVTAEHWGAQPFHGVRRPSLVG CCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCEEHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA