Click here to switch to the map view.

The map label for this gene is 160875228

Identifier: 160875228

GI number: 160875228

Start: 2527788

End: 2530004

Strand: Direct

Name: 160875228

Synonym: Sbal195_2115

Alternate gene names: NA

Gene position: 2527788-2530004 (Clockwise)

Preceding gene: 160875218

Following gene: 160875229

Centisome position: 47.27

GC content: 46.96

Gene sequence:

>2217_bases
ATGACTAAGGAATGGTTTAGCACTGTAGAAATTGCAGAGCTATTGGATGTCGGGGATAGACGCGTCCGTGATAGAGCAAA
ACAGGAGAACTGGCAAAAGCAGAGGCGACAAGGGCTAGGTGGGGGATTCGAATATCACCTAAATAGTCTGCCCCTAGAGG
CTCGTCAGAAGCTGGCAAAACAGGAAGCGGAGCAGATAGCAACATCTCCAACGTCCCTTATGCGTGCAGGTTCTGCTGTT
GCCAAACTGCAAATGCCTGCAGTGAGTCAAACAGAAAAAGCCAAGAGCATTCAGCAGTTTATAAACCTACCTGATAAAGC
GCAAAAGCGGGCTGATGCAAAGATGCTTATCGTCAATGCCAAGGCAAAATTCTGCATGCCTTACCTTGAGGTGCGTAAGC
TCGTTGATGGTGAAAAAGCATTCTGCGAAGCGTATGTCAAACGTTCGATTGCACTACCTGAGTGGGTATTCTCTGTTATT
AGCAGCGTTTCAGTTGTCACGATCCGCCGTTGGGAAAACGTATTAACAAAAGAGGGCGTTAGCGCACTCGCAGGTAAATA
CAAAGTCGAGCGTCCATGTTTATTGAATGACGAGCCCGACTTAGCTGACTTCCTAAAGGGGCTGATCACCGCTAAACCGC
ATCTGGCGGGCAAGGCAAAGCAGCTTAAAAAGCTAGCTGAGATCTATGCGATTAAAACCGACATGCCTTGGCAGATCCCA
AGCATCTCCAGCATTCGCCGCTGGGTGAATAAATGGATAAGCCAGAATCAAGCGGCTTTTACATTCACTACAAACCCTAA
AAAATTCAACGATAAATACCGGACTGCAGTTGAGCAAACCTATCCATGGATGGCTGCGCCAAACGATGTATGGGAATTTG
ACTCAACCCCAGTCGATGCCATGTTGAAAGAAGGGCGACACACCATTATTGCGGTGATCGACTGCTTCACACGTCGCGTC
AAACTGCTTGTTTCACCTACTTCATCAAGCGAAGGCATTTGCCTTTTAATGCGCAAGACCTTACTGGCTTGGGGAGTTCC
AAACCAAGGCGGCTTAATGCGTACCGATAACGGCAGCGATTATGTCAGCCAGCGAACCACGAGCATCTATCACTTACTCG
ACTTAGAACAAAGCCGAGCTAACCCATACTCAGGTTGGGAAAAGCCCTTTATCGAACGTTTCTTTAAGACGCTCAGCCAT
GATCTCATTGAGTTACTGCCTGGCTACATTGGCCATAACGTCAATGATCGCGAAGCTATCGAGGCTCGAAAAGAATTTGC
GGTACGCCTTAAAGAGCGCAACAAGAAAGAAAACGAGAAAGCGGATTACGATCTCCGTATGACGCAACCGGAATTGCAGC
AACTTCTTGATAATTGGGTTGATGCCTATTATCACCTTCGCGCACACGATGGCTTAAAGGGTAAAACACCCAATGAAGTT
TATCGCGCAGCTCAATATCAAGTGCAGTCAGTCGAACATCCAGAAGCCTTAGATCTCCTGCTTAACCACGTTGGCGAGTA
CACCATCCTTAAGGGCTTTATTAAAGCGGGAGGATTGCGTTATACGGCACCGGAAATGTTGGAGCATGAGTGGAAAGGGC
AACGAGTTCGAGTATTCCTCGATCCAACGGATGTCGCTCGAGCGTTTATATACCCGATCAATAATTGGGAAACCCGAATC
GAAGCTGTTGATAGCCGTCTTTTAGGTCAAGAGATCAGCCCTGCGGCTTATCGTCAAACCAAAAAAGAAGAAGCCAAGGC
ATTGCGTAGTTTCAGGGCCGAAATGAAGCAACTCGCTAAAACGTTCAACATAGGTGAGATCCATCAAACCGTCATTGAAC
ACTATGCCAAGCAGGCTAAGTCACTAGTCGAGTTTCCAACCCAGCCAATAGCCCACCAAAACCCCAGCTTAATGGCATTA
ACTGAGGCTGCAGAGCAGCTTGTTAAAACTAATAAACCTGGATATAGCGACCAACAAATTGAGCATTTACGCCAGAAGCG
TAAAGCGATTGAAGAACGTAAAAACACCATTAATCAACAGCATGCAACCTTAGTGCGTAATGAGCACGAAAAGGCACGTT
TGCTTGCCGCTGAATCTCTCAACCGTGAATTAACGCCAAAGGAGGATGCATTCCTAAAGGATTACAAAAAGCACAACAAG
TTAGGGGCAAAACGCATTGATGAAATCATGGGCCATAAGCGCAGAGCGACCAACTGA

Upstream 100 bases:

>100_bases
TTTGCACCCAATACAGGCCGTAAACCTAAACGCTTAAAAGCCATCAAGATCATGGCTGCTTTATCTGAATATCTTGGTGT
TGATTTAGTGGGAGAGCACC

Downstream 100 bases:

>100_bases
GCACTTATGACCCACAACGGCCATGAAGGCCATAAAACTAAAGCAAATGGAGTATACAAAATGAAAGCAGTGATCGCACC
TGTAAAAAATGTCCTGACAG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase Catalytic Region; Transposase Protein A; Integrase Catalytic Subunit; Prophage Mu DNA Transposition Protein A; Prophage; Bacteriophage DNA Transposition Protein A; Transposase-Like Mu; Bacteriophage DNA Transposase; Phage Transposase Protein A

Number of amino acids: Translated: 738; Mature: 737

Protein sequence:

>738_residues
MTKEWFSTVEIAELLDVGDRRVRDRAKQENWQKQRRQGLGGGFEYHLNSLPLEARQKLAKQEAEQIATSPTSLMRAGSAV
AKLQMPAVSQTEKAKSIQQFINLPDKAQKRADAKMLIVNAKAKFCMPYLEVRKLVDGEKAFCEAYVKRSIALPEWVFSVI
SSVSVVTIRRWENVLTKEGVSALAGKYKVERPCLLNDEPDLADFLKGLITAKPHLAGKAKQLKKLAEIYAIKTDMPWQIP
SISSIRRWVNKWISQNQAAFTFTTNPKKFNDKYRTAVEQTYPWMAAPNDVWEFDSTPVDAMLKEGRHTIIAVIDCFTRRV
KLLVSPTSSSEGICLLMRKTLLAWGVPNQGGLMRTDNGSDYVSQRTTSIYHLLDLEQSRANPYSGWEKPFIERFFKTLSH
DLIELLPGYIGHNVNDREAIEARKEFAVRLKERNKKENEKADYDLRMTQPELQQLLDNWVDAYYHLRAHDGLKGKTPNEV
YRAAQYQVQSVEHPEALDLLLNHVGEYTILKGFIKAGGLRYTAPEMLEHEWKGQRVRVFLDPTDVARAFIYPINNWETRI
EAVDSRLLGQEISPAAYRQTKKEEAKALRSFRAEMKQLAKTFNIGEIHQTVIEHYAKQAKSLVEFPTQPIAHQNPSLMAL
TEAAEQLVKTNKPGYSDQQIEHLRQKRKAIEERKNTINQQHATLVRNEHEKARLLAAESLNRELTPKEDAFLKDYKKHNK
LGAKRIDEIMGHKRRATN

Sequences:

>Translated_738_residues
MTKEWFSTVEIAELLDVGDRRVRDRAKQENWQKQRRQGLGGGFEYHLNSLPLEARQKLAKQEAEQIATSPTSLMRAGSAV
AKLQMPAVSQTEKAKSIQQFINLPDKAQKRADAKMLIVNAKAKFCMPYLEVRKLVDGEKAFCEAYVKRSIALPEWVFSVI
SSVSVVTIRRWENVLTKEGVSALAGKYKVERPCLLNDEPDLADFLKGLITAKPHLAGKAKQLKKLAEIYAIKTDMPWQIP
SISSIRRWVNKWISQNQAAFTFTTNPKKFNDKYRTAVEQTYPWMAAPNDVWEFDSTPVDAMLKEGRHTIIAVIDCFTRRV
KLLVSPTSSSEGICLLMRKTLLAWGVPNQGGLMRTDNGSDYVSQRTTSIYHLLDLEQSRANPYSGWEKPFIERFFKTLSH
DLIELLPGYIGHNVNDREAIEARKEFAVRLKERNKKENEKADYDLRMTQPELQQLLDNWVDAYYHLRAHDGLKGKTPNEV
YRAAQYQVQSVEHPEALDLLLNHVGEYTILKGFIKAGGLRYTAPEMLEHEWKGQRVRVFLDPTDVARAFIYPINNWETRI
EAVDSRLLGQEISPAAYRQTKKEEAKALRSFRAEMKQLAKTFNIGEIHQTVIEHYAKQAKSLVEFPTQPIAHQNPSLMAL
TEAAEQLVKTNKPGYSDQQIEHLRQKRKAIEERKNTINQQHATLVRNEHEKARLLAAESLNRELTPKEDAFLKDYKKHNK
LGAKRIDEIMGHKRRATN
>Mature_737_residues
TKEWFSTVEIAELLDVGDRRVRDRAKQENWQKQRRQGLGGGFEYHLNSLPLEARQKLAKQEAEQIATSPTSLMRAGSAVA
KLQMPAVSQTEKAKSIQQFINLPDKAQKRADAKMLIVNAKAKFCMPYLEVRKLVDGEKAFCEAYVKRSIALPEWVFSVIS
SVSVVTIRRWENVLTKEGVSALAGKYKVERPCLLNDEPDLADFLKGLITAKPHLAGKAKQLKKLAEIYAIKTDMPWQIPS
ISSIRRWVNKWISQNQAAFTFTTNPKKFNDKYRTAVEQTYPWMAAPNDVWEFDSTPVDAMLKEGRHTIIAVIDCFTRRVK
LLVSPTSSSEGICLLMRKTLLAWGVPNQGGLMRTDNGSDYVSQRTTSIYHLLDLEQSRANPYSGWEKPFIERFFKTLSHD
LIELLPGYIGHNVNDREAIEARKEFAVRLKERNKKENEKADYDLRMTQPELQQLLDNWVDAYYHLRAHDGLKGKTPNEVY
RAAQYQVQSVEHPEALDLLLNHVGEYTILKGFIKAGGLRYTAPEMLEHEWKGQRVRVFLDPTDVARAFIYPINNWETRIE
AVDSRLLGQEISPAAYRQTKKEEAKALRSFRAEMKQLAKTFNIGEIHQTVIEHYAKQAKSLVEFPTQPIAHQNPSLMALT
EAAEQLVKTNKPGYSDQQIEHLRQKRKAIEERKNTINQQHATLVRNEHEKARLLAAESLNRELTPKEDAFLKDYKKHNKL
GAKRIDEIMGHKRRATN

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84701; Mature: 84570

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKEWFSTVEIAELLDVGDRRVRDRAKQENWQKQRRQGLGGGFEYHLNSLPLEARQKLAK
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHH
QEAEQIATSPTSLMRAGSAVAKLQMPAVSQTEKAKSIQQFINLPDKAQKRADAKMLIVNA
HHHHHHHCCHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEC
KAKFCMPYLEVRKLVDGEKAFCEAYVKRSIALPEWVFSVISSVSVVTIRRWENVLTKEGV
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALAGKYKVERPCLLNDEPDLADFLKGLITAKPHLAGKAKQLKKLAEIYAIKTDMPWQIP
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
SISSIRRWVNKWISQNQAAFTFTTNPKKFNDKYRTAVEQTYPWMAAPNDVWEFDSTPVDA
CHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
MLKEGRHTIIAVIDCFTRRVKLLVSPTSSSEGICLLMRKTLLAWGVPNQGGLMRTDNGSD
HHHCCCHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCH
YVSQRTTSIYHLLDLEQSRANPYSGWEKPFIERFFKTLSHDLIELLPGYIGHNVNDREAI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
EARKEFAVRLKERNKKENEKADYDLRMTQPELQQLLDNWVDAYYHLRAHDGLKGKTPNEV
HHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
YRAAQYQVQSVEHPEALDLLLNHVGEYTILKGFIKAGGLRYTAPEMLEHEWKGQRVRVFL
HHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEE
DPTDVARAFIYPINNWETRIEAVDSRLLGQEISPAAYRQTKKEEAKALRSFRAEMKQLAK
CHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFNIGEIHQTVIEHYAKQAKSLVEFPTQPIAHQNPSLMALTEAAEQLVKTNKPGYSDQQI
HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHH
EHLRQKRKAIEERKNTINQQHATLVRNEHEKARLLAAESLNRELTPKEDAFLKDYKKHNK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LGAKRIDEIMGHKRRATN
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TKEWFSTVEIAELLDVGDRRVRDRAKQENWQKQRRQGLGGGFEYHLNSLPLEARQKLAK
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHH
QEAEQIATSPTSLMRAGSAVAKLQMPAVSQTEKAKSIQQFINLPDKAQKRADAKMLIVNA
HHHHHHHCCHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEC
KAKFCMPYLEVRKLVDGEKAFCEAYVKRSIALPEWVFSVISSVSVVTIRRWENVLTKEGV
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALAGKYKVERPCLLNDEPDLADFLKGLITAKPHLAGKAKQLKKLAEIYAIKTDMPWQIP
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
SISSIRRWVNKWISQNQAAFTFTTNPKKFNDKYRTAVEQTYPWMAAPNDVWEFDSTPVDA
CHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
MLKEGRHTIIAVIDCFTRRVKLLVSPTSSSEGICLLMRKTLLAWGVPNQGGLMRTDNGSD
HHHCCCHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCH
YVSQRTTSIYHLLDLEQSRANPYSGWEKPFIERFFKTLSHDLIELLPGYIGHNVNDREAI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
EARKEFAVRLKERNKKENEKADYDLRMTQPELQQLLDNWVDAYYHLRAHDGLKGKTPNEV
HHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
YRAAQYQVQSVEHPEALDLLLNHVGEYTILKGFIKAGGLRYTAPEMLEHEWKGQRVRVFL
HHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEE
DPTDVARAFIYPINNWETRIEAVDSRLLGQEISPAAYRQTKKEEAKALRSFRAEMKQLAK
CHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFNIGEIHQTVIEHYAKQAKSLVEFPTQPIAHQNPSLMALTEAAEQLVKTNKPGYSDQQI
HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHH
EHLRQKRKAIEERKNTINQQHATLVRNEHEKARLLAAESLNRELTPKEDAFLKDYKKHNK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LGAKRIDEIMGHKRRATN
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA