| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875122
Identifier: 160875122
GI number: 160875122
Start: 2389312
End: 2389902
Strand: Reverse
Name: 160875122
Synonym: Sbal195_2008
Alternate gene names: NA
Gene position: 2389902-2389312 (Counterclockwise)
Preceding gene: 160875123
Following gene: 160875121
Centisome position: 44.69
GC content: 43.99
Gene sequence:
>591_bases ATGAGCCAACACATCGAAATCCCCGCATTCTTGCTTGAAATGTCTCAGCAAATGCACCAACAAGATAATCGCATTACTGC GGAGCCAATCTGGCAAGTGCGCTGCAAGCGCTACTTAGTGACTCAAGAAGGCTACAACGATCATCACTGGGAGATTTTTT ACGGTGAAGACGGCGATTATTCAACGCTCTATCGCTCTGATGATGGCGATAAAAGTAACCTTGCTGAATGGTTGCTAGAG CATGATGCCGAATGGTGCAAAACGTGGTTATTCGAGAACGACAAGATCGAATCTTATCACGATGAAATCGAATCATTTGC CGACGTATTCACTCAAGCGTTTATCGAAGGTTTTGATGTTGATTCAGATCATTACGATTTGCCATCAAACCTCACCAAAC TTCACTTTCAAGAAATTGAAGAGGTCATTAAATCCTGCCTCACCGAGGCTGATGCAAATTGGTTTCTCAGGCGTAAACAG CATGATTACCCACATCTATATACCTATGTCGCGTCAATGTATTTGTGCCCTCAAATGATTGAGTTACGTAACTGGATCCT GTCACTGACTAAGGCAGAGGTGGCGGCATGA
Upstream 100 bases:
>100_bases TGGATGTTGCCCGGTGGCAAGTTTACCACCGACCGCACTGTCGCCATTCGTGCCGCCAAAGGTCTGCACCGTTTCTTGGT TAAAAGATAAGGAAATCAGC
Downstream 100 bases:
>100_bases ACCCATTATTCTACCTGCGTGATTCGCGCGACAATGTTGGCAGTACTTGCATGTTTTGGGCAGACCGTGGCGGCTACACC AGCAACTTAGATCTAGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSQHIEIPAFLLEMSQQMHQQDNRITAEPIWQVRCKRYLVTQEGYNDHHWEIFYGEDGDYSTLYRSDDGDKSNLAEWLLE HDAEWCKTWLFENDKIESYHDEIESFADVFTQAFIEGFDVDSDHYDLPSNLTKLHFQEIEEVIKSCLTEADANWFLRRKQ HDYPHLYTYVASMYLCPQMIELRNWILSLTKAEVAA
Sequences:
>Translated_196_residues MSQHIEIPAFLLEMSQQMHQQDNRITAEPIWQVRCKRYLVTQEGYNDHHWEIFYGEDGDYSTLYRSDDGDKSNLAEWLLE HDAEWCKTWLFENDKIESYHDEIESFADVFTQAFIEGFDVDSDHYDLPSNLTKLHFQEIEEVIKSCLTEADANWFLRRKQ HDYPHLYTYVASMYLCPQMIELRNWILSLTKAEVAA >Mature_195_residues SQHIEIPAFLLEMSQQMHQQDNRITAEPIWQVRCKRYLVTQEGYNDHHWEIFYGEDGDYSTLYRSDDGDKSNLAEWLLEH DAEWCKTWLFENDKIESYHDEIESFADVFTQAFIEGFDVDSDHYDLPSNLTKLHFQEIEEVIKSCLTEADANWFLRRKQH DYPHLYTYVASMYLCPQMIELRNWILSLTKAEVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23414; Mature: 23283
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQHIEIPAFLLEMSQQMHQQDNRITAEPIWQVRCKRYLVTQEGYNDHHWEIFYGEDGDY CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC STLYRSDDGDKSNLAEWLLEHDAEWCKTWLFENDKIESYHDEIESFADVFTQAFIEGFDV CEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC DSDHYDLPSNLTKLHFQEIEEVIKSCLTEADANWFLRRKQHDYPHLYTYVASMYLCPQMI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ELRNWILSLTKAEVAA HHHHHHHHHHHHHHCC >Mature Secondary Structure SQHIEIPAFLLEMSQQMHQQDNRITAEPIWQVRCKRYLVTQEGYNDHHWEIFYGEDGDY CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC STLYRSDDGDKSNLAEWLLEHDAEWCKTWLFENDKIESYHDEIESFADVFTQAFIEGFDV CEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC DSDHYDLPSNLTKLHFQEIEEVIKSCLTEADANWFLRRKQHDYPHLYTYVASMYLCPQMI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ELRNWILSLTKAEVAA HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA