| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875121
Identifier: 160875121
GI number: 160875121
Start: 2388617
End: 2389315
Strand: Reverse
Name: 160875121
Synonym: Sbal195_2007
Alternate gene names: NA
Gene position: 2389315-2388617 (Counterclockwise)
Preceding gene: 160875122
Following gene: 160875120
Centisome position: 44.68
GC content: 48.21
Gene sequence:
>699_bases ATGAACCCATTATTCTACCTGCGTGATTCGCGCGACAATGTTGGCAGTACTTGCATGTTTTGGGCAGACCGTGGCGGCTA CACCAGCAACTTAGATCTAGCTGAGGTGTTTACCCTTGAAGAAGCACAGCGCCAATTTAATAGCCGTCACACTGACGTTC CACTTAGCAAGGAGCTTGTCGATGAGCAATCAACCGTACGCGTTGATCACCAGTATCTTGGCGATGAGGGTGAAAAGTCA GGCTGTGATGAATACGTTATTCGCATTGGGGATCGCACTGATGGCAACGATGTTTATTGGCTAACAGTCGATTTTAGCTC TGTAAGTTACAAGGCATCTGTCGTATTTACATACCAAGTTGCGCTAGTCAGAGTAAACGAACTCAAGACACAAGGTATCG TTGCCAATATCTATGCCAAAACCGACATAGACGCCATCGCGCGCCGCACTTTTCAAGCCGCCAACATCAACGAGCGCAGC ATGATCACTGCTGCTGGCATTCGTAAACCCAAGCGACCACGCACCCGCCAAACCACAGGTAAAACGCGTGGCAATTGCCC ACATTGTGGCTGCATTACTTGGGGATTAAATCCTTACGAAGCCTATAGCTGTGCTGATCAATATAGCGAACGCATGGAGC TTGATTTTACGGTATCCATAAGCTGCGAAGAATTGAAGGCAAGGAGAAAGGCAGCATGA
Upstream 100 bases:
>100_bases ACCCACATCTATATACCTATGTCGCGTCAATGTATTTGTGCCCTCAAATGATTGAGTTACGTAACTGGATCCTGTCACTG ACTAAGGCAGAGGTGGCGGC
Downstream 100 bases:
>100_bases ACCACTTACTCCCGGGCTTTGAATCACAAGAGCGCGTTGCGTTATTGCTGTCGCTTACCCGCATTAGTTCGCCCGAGGTG ATTGCCGCGTTAACGCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MNPLFYLRDSRDNVGSTCMFWADRGGYTSNLDLAEVFTLEEAQRQFNSRHTDVPLSKELVDEQSTVRVDHQYLGDEGEKS GCDEYVIRIGDRTDGNDVYWLTVDFSSVSYKASVVFTYQVALVRVNELKTQGIVANIYAKTDIDAIARRTFQAANINERS MITAAGIRKPKRPRTRQTTGKTRGNCPHCGCITWGLNPYEAYSCADQYSERMELDFTVSISCEELKARRKAA
Sequences:
>Translated_232_residues MNPLFYLRDSRDNVGSTCMFWADRGGYTSNLDLAEVFTLEEAQRQFNSRHTDVPLSKELVDEQSTVRVDHQYLGDEGEKS GCDEYVIRIGDRTDGNDVYWLTVDFSSVSYKASVVFTYQVALVRVNELKTQGIVANIYAKTDIDAIARRTFQAANINERS MITAAGIRKPKRPRTRQTTGKTRGNCPHCGCITWGLNPYEAYSCADQYSERMELDFTVSISCEELKARRKAA >Mature_232_residues MNPLFYLRDSRDNVGSTCMFWADRGGYTSNLDLAEVFTLEEAQRQFNSRHTDVPLSKELVDEQSTVRVDHQYLGDEGEKS GCDEYVIRIGDRTDGNDVYWLTVDFSSVSYKASVVFTYQVALVRVNELKTQGIVANIYAKTDIDAIARRTFQAANINERS MITAAGIRKPKRPRTRQTTGKTRGNCPHCGCITWGLNPYEAYSCADQYSERMELDFTVSISCEELKARRKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26303; Mature: 26303
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLFYLRDSRDNVGSTCMFWADRGGYTSNLDLAEVFTLEEAQRQFNSRHTDVPLSKELV CCCEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH DEQSTVRVDHQYLGDEGEKSGCDEYVIRIGDRTDGNDVYWLTVDFSSVSYKASVVFTYQV CCCCEEEECHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEEE ALVRVNELKTQGIVANIYAKTDIDAIARRTFQAANINERSMITAAGIRKPKRPRTRQTTG EEEEEEHHCCCCEEEEEEECCCHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCCCCC KTRGNCPHCGCITWGLNPYEAYSCADQYSERMELDFTVSISCEELKARRKAA CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHEEEEEEEEEEHHHHHHHHCCC >Mature Secondary Structure MNPLFYLRDSRDNVGSTCMFWADRGGYTSNLDLAEVFTLEEAQRQFNSRHTDVPLSKELV CCCEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH DEQSTVRVDHQYLGDEGEKSGCDEYVIRIGDRTDGNDVYWLTVDFSSVSYKASVVFTYQV CCCCEEEECHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEEE ALVRVNELKTQGIVANIYAKTDIDAIARRTFQAANINERSMITAAGIRKPKRPRTRQTTG EEEEEEHHCCCCEEEEEEECCCHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCCCCC KTRGNCPHCGCITWGLNPYEAYSCADQYSERMELDFTVSISCEELKARRKAA CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHEEEEEEEEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA