| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160875031
Identifier: 160875031
GI number: 160875031
Start: 2284940
End: 2285905
Strand: Direct
Name: 160875031
Synonym: Sbal195_1916
Alternate gene names: NA
Gene position: 2284940-2285905 (Clockwise)
Preceding gene: 160875025
Following gene: 160875038
Centisome position: 42.73
GC content: 38.92
Gene sequence:
>966_bases ATGCAAGAAATGATAAAAAATGTGTATGGTGATACCACTGCCGTTGAGTTCAAACCAGAAATTCCGTTTGATCTTGGTGG AGATCAACCGCTTGACTGTATTTCTGCTTATCACATTACGGAGCCAGTATCACATTGGTTGTATGTTACCGAAGGATTTA AGCAATTTGGCTTTGAGCTGACTTTTCGTTTGAAATCAAATGATGAAACAGCGCCAGAATGGCCTATTTCAATGCTAAAT GGACTTGCTACTTACGTATTCACACAAGAAAGACATCTTACAGTCGGTGAGATGATTGACTTCAAAAGACCATTAGTCAA TCAGCCAGATTGTTTTCTTACAACCTTGATGATGACTGAAGAGCCAAAACTTAAAAGTGCTGACGAGTCGGTTAAAATTT TACAAATCGTGCCTATTACCCCTGATGAAGCAATGGCTGCAAAAGGCTGGTTAACCGAAAAGTTTTTAAAACTGATCGAA ATTCAGATTAAAGATGGACTCACTGATCTGAGACGTTTCAGTCTGTTAATTCAAGATAATATTGCTAATGCAATAGCACG GGGACGAGATAAAGACGGCTCAGATACAGATAGCGTTCCATCATCAAAAATTTATTTTAATATTTCAGAGCCGCGTAAGG CTCGTGTTGAATTTGATGCTTTAGCAGGTTTCCATTTACTTTCTGTTATGCCAGGTCGTATTCCACATGAGAAAGAACTG CATATCATTAGTCCAGAGCACAATATTACTTTTATTCCAAGTGACGAAGGTATGGTTAAAGGCGTCAATGACACTTGGGT TGAAGTCTATATGACGCCGGATATGTACAGAGAGTTCTATGAAAATCTTGAGGTAAAACGGAAGAAGTTTTACCTTTCAG GTTTTGATGGAATTGAGTTTGCCGTGAATGATACTTACTTGCGAGATCATGAAGGTTCTATCAGTGGCGTGCAACAGTGG CGTTAA
Upstream 100 bases:
>100_bases CTATGTTATTTACTTATTTCGTATTATTGACTCTGCCTCGTTCGAGCCTAAAATTACGCAGGTTAGGATATATTTAACAT GGAATAGTGAGGTTTTTTAA
Downstream 100 bases:
>100_bases TTTTGTAAGAACGCAGTAGTGAGCACTCTGTGCCCGCAATTGTGTTGAAGAATAAAACGAGCCTCAATGAGGCTCGTTTT TATTTTCTTCATCACTGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: 2-Deoxystreptamine Pathway Aminotransferase; Aminotransferase/Butyrosin Synthesis Protein
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MQEMIKNVYGDTTAVEFKPEIPFDLGGDQPLDCISAYHITEPVSHWLYVTEGFKQFGFELTFRLKSNDETAPEWPISMLN GLATYVFTQERHLTVGEMIDFKRPLVNQPDCFLTTLMMTEEPKLKSADESVKILQIVPITPDEAMAAKGWLTEKFLKLIE IQIKDGLTDLRRFSLLIQDNIANAIARGRDKDGSDTDSVPSSKIYFNISEPRKARVEFDALAGFHLLSVMPGRIPHEKEL HIISPEHNITFIPSDEGMVKGVNDTWVEVYMTPDMYREFYENLEVKRKKFYLSGFDGIEFAVNDTYLRDHEGSISGVQQW R
Sequences:
>Translated_321_residues MQEMIKNVYGDTTAVEFKPEIPFDLGGDQPLDCISAYHITEPVSHWLYVTEGFKQFGFELTFRLKSNDETAPEWPISMLN GLATYVFTQERHLTVGEMIDFKRPLVNQPDCFLTTLMMTEEPKLKSADESVKILQIVPITPDEAMAAKGWLTEKFLKLIE IQIKDGLTDLRRFSLLIQDNIANAIARGRDKDGSDTDSVPSSKIYFNISEPRKARVEFDALAGFHLLSVMPGRIPHEKEL HIISPEHNITFIPSDEGMVKGVNDTWVEVYMTPDMYREFYENLEVKRKKFYLSGFDGIEFAVNDTYLRDHEGSISGVQQW R >Mature_321_residues MQEMIKNVYGDTTAVEFKPEIPFDLGGDQPLDCISAYHITEPVSHWLYVTEGFKQFGFELTFRLKSNDETAPEWPISMLN GLATYVFTQERHLTVGEMIDFKRPLVNQPDCFLTTLMMTEEPKLKSADESVKILQIVPITPDEAMAAKGWLTEKFLKLIE IQIKDGLTDLRRFSLLIQDNIANAIARGRDKDGSDTDSVPSSKIYFNISEPRKARVEFDALAGFHLLSVMPGRIPHEKEL HIISPEHNITFIPSDEGMVKGVNDTWVEVYMTPDMYREFYENLEVKRKKFYLSGFDGIEFAVNDTYLRDHEGSISGVQQW R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI296011020, Length=221, Percent_Identity=29.4117647058824, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI19923479, Length=221, Percent_Identity=29.4117647058824, Blast_Score=93, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36815; Mature: 36815
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEMIKNVYGDTTAVEFKPEIPFDLGGDQPLDCISAYHITEPVSHWLYVTEGFKQFGFEL CHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEHHHHHCCEEE TFRLKSNDETAPEWPISMLNGLATYVFTQERHLTVGEMIDFKRPLVNQPDCFLTTLMMTE EEEECCCCCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHCCCCCCCCCHHEEEEEECC EPKLKSADESVKILQIVPITPDEAMAAKGWLTEKFLKLIEIQIKDGLTDLRRFSLLIQDN CCCCCCCCCCEEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH IANAIARGRDKDGSDTDSVPSSKIYFNISEPRKARVEFDALAGFHLLSVMPGRIPHEKEL HHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCE HIISPEHNITFIPSDEGMVKGVNDTWVEVYMTPDMYREFYENLEVKRKKFYLSGFDGIEF EEECCCCCEEEEECCCCCEECCCCCEEEEEECHHHHHHHHHHHHHEEHEEEEECCCCEEE AVNDTYLRDHEGSISGVQQWR EECCCEEECCCCCCCCHHCCC >Mature Secondary Structure MQEMIKNVYGDTTAVEFKPEIPFDLGGDQPLDCISAYHITEPVSHWLYVTEGFKQFGFEL CHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEHHHHHCCEEE TFRLKSNDETAPEWPISMLNGLATYVFTQERHLTVGEMIDFKRPLVNQPDCFLTTLMMTE EEEECCCCCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHCCCCCCCCCHHEEEEEECC EPKLKSADESVKILQIVPITPDEAMAAKGWLTEKFLKLIEIQIKDGLTDLRRFSLLIQDN CCCCCCCCCCEEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH IANAIARGRDKDGSDTDSVPSSKIYFNISEPRKARVEFDALAGFHLLSVMPGRIPHEKEL HHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCE HIISPEHNITFIPSDEGMVKGVNDTWVEVYMTPDMYREFYENLEVKRKKFYLSGFDGIEF EEECCCCCEEEEECCCCCEECCCCCEEEEEECHHHHHHHHHHHHHEEHEEEEECCCCEEE AVNDTYLRDHEGSISGVQQWR EECCCEEECCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA