| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874977
Identifier: 160874977
GI number: 160874977
Start: 2226657
End: 2227856
Strand: Direct
Name: 160874977
Synonym: Sbal195_1862
Alternate gene names: NA
Gene position: 2226657-2227856 (Clockwise)
Preceding gene: 160874976
Following gene: 160874978
Centisome position: 41.64
GC content: 35.17
Gene sequence:
>1200_bases ATGCGTTTTTTAATTTCATTACTCTTTGTTTTTATCGTTGCTATATCTGAGGCTTCTGTATCTGAGGTTTCTGCGTTAGA TAAAGTGACTATTGGAGAAAATTTCATTATACATTCTGAAATTATTGGCGAAGATAGACCTATTTCAGTGTATATACCAA AGGGAGTAAATACAGGTGATTCTCTATATGTTATCTATTTACTTGATAGTGAACACCACTTTCATACCGTCACGGGCATA GTGCAGTCTCTAGTCGACTATGAACAAATACCCAAAACAATGGTTGTTGGTATTCAAACAACAAATCGTCCTCGTGACTA TCTCCCTAAGATTAACGGTGAGCCACAAACCAAATTTCAAAAATTTGTAAAATCTAAATGGCCTGATTCAGGGCAAGATA ATTTTTTAACATTTCTAAATGATGAGCTCTTTCCATATATTGACAAAAATTATACTACCTATCCTCACAGAACAATTATT GGTCATTCAAATGGTGGGACATTAGCACTTTCAGCTTTGTTTGAGCGCCCAGAACTGTTCAATAATTACTTAGCTATAAG CGCCAATGGATGGTGGAGTTATGATGAAATAATTCAAAACTCAAAAAAACTAATAGAAAGCAACCGTACTAAACAAAAAC TTTTTCTTTCGGTTGCCGGTGAAGGTAGTCAATTCTATACGGGTACATTAGAGCTATTAACCAACATGGAAAGGAACAAA CCCGTTAATCTAGACTGGAAATTTGAACACTATCCAGAGCGTACTCACATGAGTGGCATATTACCTGCGATAACGAGTGG GCTAGAGTATTTGTATGCTGATGTTAATTTTAAAATCACCCCTGAATTGGCTAAATATGCGAACATATCAGTCGTTAAAA GTTACTATTCAGATTTATCTAAGCAGTTTGGCTTCACTGTTTCAGCCCCTATTGATATTTATGTAGAATTTGCAGAGCAA CAGCAAATGAACCTGCGAGAAGAAGAAGCGCTTAAGACATTAGAGCAATTTGTACATGATTACCCTGAACATTCATATGC GCATATGAAACTCGCTCAAGGTTATGCTAAGGTGAAAAAATATAATCAATCCTATGAAGTTTTTGTTCAAGCACTTAATT TAGCAAAACAACAAAAGAAAGAAACGAACATTATCGATGCGCTTCAAGATATGGTTAATCAAGCTCAAACAAAACTTTAA
Upstream 100 bases:
>100_bases GAGTGCACGTTTTTACTGCTCTAATGAGGTAAATCCGTATGCGAACAATGCAAGTGTTAGGTTTTTAAATCACTATCAAA TCACAAAAAGGACTTTGTTT
Downstream 100 bases:
>100_bases TAATAAAAATCCATATAAGGTGTTAAAAGTCCTCGGAGATAAAAATTGCTTAAAGAGTATGTACATAGATTTAGGAATGC CCTAGTAAAGGCCGCAGAGC
Product: putative esterase
Products: NA
Alternate protein names: Alpha/Beta Superfamily Hydrolase; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Esterase Superfamily; Alpha/Beta Fold Family Hydrolase-Like Protein; Ferric-Enterobactin Hydrolase; TPR Repeat-Containing Protein; Cysteine Synthase A; IroE Protein; Esterase Family Protein; Alpha/Beta Fold Family Hydrolase
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MRFLISLLFVFIVAISEASVSEVSALDKVTIGENFIIHSEIIGEDRPISVYIPKGVNTGDSLYVIYLLDSEHHFHTVTGI VQSLVDYEQIPKTMVVGIQTTNRPRDYLPKINGEPQTKFQKFVKSKWPDSGQDNFLTFLNDELFPYIDKNYTTYPHRTII GHSNGGTLALSALFERPELFNNYLAISANGWWSYDEIIQNSKKLIESNRTKQKLFLSVAGEGSQFYTGTLELLTNMERNK PVNLDWKFEHYPERTHMSGILPAITSGLEYLYADVNFKITPELAKYANISVVKSYYSDLSKQFGFTVSAPIDIYVEFAEQ QQMNLREEEALKTLEQFVHDYPEHSYAHMKLAQGYAKVKKYNQSYEVFVQALNLAKQQKKETNIIDALQDMVNQAQTKL
Sequences:
>Translated_399_residues MRFLISLLFVFIVAISEASVSEVSALDKVTIGENFIIHSEIIGEDRPISVYIPKGVNTGDSLYVIYLLDSEHHFHTVTGI VQSLVDYEQIPKTMVVGIQTTNRPRDYLPKINGEPQTKFQKFVKSKWPDSGQDNFLTFLNDELFPYIDKNYTTYPHRTII GHSNGGTLALSALFERPELFNNYLAISANGWWSYDEIIQNSKKLIESNRTKQKLFLSVAGEGSQFYTGTLELLTNMERNK PVNLDWKFEHYPERTHMSGILPAITSGLEYLYADVNFKITPELAKYANISVVKSYYSDLSKQFGFTVSAPIDIYVEFAEQ QQMNLREEEALKTLEQFVHDYPEHSYAHMKLAQGYAKVKKYNQSYEVFVQALNLAKQQKKETNIIDALQDMVNQAQTKL >Mature_399_residues MRFLISLLFVFIVAISEASVSEVSALDKVTIGENFIIHSEIIGEDRPISVYIPKGVNTGDSLYVIYLLDSEHHFHTVTGI VQSLVDYEQIPKTMVVGIQTTNRPRDYLPKINGEPQTKFQKFVKSKWPDSGQDNFLTFLNDELFPYIDKNYTTYPHRTII GHSNGGTLALSALFERPELFNNYLAISANGWWSYDEIIQNSKKLIESNRTKQKLFLSVAGEGSQFYTGTLELLTNMERNK PVNLDWKFEHYPERTHMSGILPAITSGLEYLYADVNFKITPELAKYANISVVKSYYSDLSKQFGFTVSAPIDIYVEFAEQ QQMNLREEEALKTLEQFVHDYPEHSYAHMKLAQGYAKVKKYNQSYEVFVQALNLAKQQKKETNIIDALQDMVNQAQTKL
Specific function: Unknown
COG id: COG2819
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45756; Mature: 45756
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLISLLFVFIVAISEASVSEVSALDKVTIGENFIIHSEIIGEDRPISVYIPKGVNTGD CHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCEEEEHHHCCCCCCEEEEECCCCCCCC SLYVIYLLDSEHHFHTVTGIVQSLVDYEQIPKTMVVGIQTTNRPRDYLPKINGEPQTKFQ CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHCCCCCCCCHHHHH KFVKSKWPDSGQDNFLTFLNDELFPYIDKNYTTYPHRTIIGHSNGGTLALSALFERPELF HHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHCHHHH NNYLAISANGWWSYDEIIQNSKKLIESNRTKQKLFLSVAGEGSQFYTGTLELLTNMERNK CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEHHHHHHHHHHHCCC PVNLDWKFEHYPERTHMSGILPAITSGLEYLYADVNFKITPELAKYANISVVKSYYSDLS CCCEEECCCCCCCHHHHHHHHHHHHHCHHHEEECCCEEECHHHHHHHHHHHHHHHHHHHH KQFGFTVSAPIDIYVEFAEQQQMNLREEEALKTLEQFVHDYPEHSYAHMKLAQGYAKVKK HHCCCEEECCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH YNQSYEVFVQALNLAKQQKKETNIIDALQDMVNQAQTKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRFLISLLFVFIVAISEASVSEVSALDKVTIGENFIIHSEIIGEDRPISVYIPKGVNTGD CHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCEEEEHHHCCCCCCEEEEECCCCCCCC SLYVIYLLDSEHHFHTVTGIVQSLVDYEQIPKTMVVGIQTTNRPRDYLPKINGEPQTKFQ CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHCCCCCCCCHHHHH KFVKSKWPDSGQDNFLTFLNDELFPYIDKNYTTYPHRTIIGHSNGGTLALSALFERPELF HHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHCHHHH NNYLAISANGWWSYDEIIQNSKKLIESNRTKQKLFLSVAGEGSQFYTGTLELLTNMERNK CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEHHHHHHHHHHHCCC PVNLDWKFEHYPERTHMSGILPAITSGLEYLYADVNFKITPELAKYANISVVKSYYSDLS CCCEEECCCCCCCHHHHHHHHHHHHHCHHHEEECCCEEECHHHHHHHHHHHHHHHHHHHH KQFGFTVSAPIDIYVEFAEQQQMNLREEEALKTLEQFVHDYPEHSYAHMKLAQGYAKVKK HHCCCEEECCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH YNQSYEVFVQALNLAKQQKKETNIIDALQDMVNQAQTKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA