| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874976
Identifier: 160874976
GI number: 160874976
Start: 2224812
End: 2225237
Strand: Direct
Name: 160874976
Synonym: Sbal195_1861
Alternate gene names: NA
Gene position: 2224812-2225237 (Clockwise)
Preceding gene: 160874975
Following gene: 160874977
Centisome position: 41.61
GC content: 47.65
Gene sequence:
>991_bases ATGCCGCGCCCACGCAGAACTCAGATAAGTGTTGAAGACACACCCTATTACCATTGCTGTAGCCGCGTTGTGCGGCGTGC GTTTTTGTGTGGTGATGATGTCTATTCGGGGAAAAACAATGACCATCGCCGCGCTTGGGTAGAATCACTACTGTTTGAAC TTGAAGCCGTTTTTGCCATTGATGTGGCGGCCTTTGCAGTGATGTCCAATCATCTGCATGTGGTGCTGCGGGTCGATATC GACAGCGCGAATCGTTGGACTGACCGCGAAGTACTTGAGCAGTGGCATAAGCTGTTTAAAGGCGATGAATTAACGCAAAA ATTCGCCAAAGGTGAGTTAGTTGAGGCGCATGAAGTTCACAGATTAAAGCATTCAATTGCCATTTATCGCAGCCGTTTAT GTGATATCAGTTGCCAGTGTTTTCAAAAGAGTGCGCTGCCTCAACGAACCCATCGCAAGGCAAGCGAATCAAGAGGATAA CTGCACAGGTCGTTTCTGGGAAGGTCGCTTTAAATCGCAAGCCCTACTCGATGAAGCCGCTGTGTTAACTTGTATGGCCT ATGTTGATTTGAATCCTATTAGAGCGCAACTGGCTGATACGCTAGAACAATCCGACCATACCAGTATTCAGCTGCGCATT CGGGCCGCATTAAAAGGTGAACAACCTAAAAATTTACTACCTTTTATCGGTAATGAGCGCGACAACCAGCCCAATGGCAT TGCGTTTTTATTATCGGATTACCTTGAATTGGTCGATGAAACAGGCCGAATTATTCGAAGCGACAAACGAGGTGCTATCA GTGAAAATAGCGCTAAGTTACTGACAAGATTAAATATCCCACATGACAATTGGCTCAAGCTCACTACTGAGTTTGGCAAG CTATTTCATGGTCCGGTGGGTACGCTGCAAGAACTCACTGATTACTGTGAACATCTAGAAAAGCGACGACGGCACTTTGC GGCAAGCTGTCAGCACTTTCACAGCAACTAA
Upstream 100 bases:
>100_bases TTGTATAGTAATAAAAAAATAAAAGTGGACACTCAGCCTTAATAGCGCAGTTGTTAACCTCCGACTATGCTTGGGTTAAG CATTAAACAAGGAGGTTTGT
Downstream 100 bases:
>100_bases CTGTAATCCTGCTTAACTAAACCAATCTCTGTCCATGTGTTTTATTGGGTGGGTTAGCATGTCTTAAATCCACTATTTTT TAATGAGTAAGCTCATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>329_residues MPRPRRTQISVEDTPYYHCCSRVVRRAFLCGDDVYSGKNNDHRRAWVESLLFELEAVFAIDVAAFAVMSNHLHVVLRVDI DSANRWTDREVLEQWHKLFKGDELTQKFAKGELVEAHEVHRLKHSIAIYRSRLCDISCQCFQRVRCLNEPIARQANQEDN CTGRFWEGRFKSQALLDEAAVLTCMAYVDLNPIRAQLADTLEQSDHTSIQLRIRAALKGEQPKNLLPFIGNERDNQPNGI AFLLSDYLELVDETGRIIRSDKRGAISENSAKLLTRLNIPHDNWLKLTTEFGKLFHGPVGTLQELTDYCEHLEKRRRHFA ASCQHFHSN
Sequences:
>Translated_142_residues MPRPRRTQISVEDTPYYHCCSRVVRRAFLCGDDVYSGKNNDHRRAWVESLLFELEAVFAIDVAAFAVMSNHLHVVLRVDI DSANRWTDREVLEQWHKLFKGDELTQKFAKGELVEAHEVHRLKHSIAIYRSRLCDISCQCFQ >Mature_141_residues PRPRRTQISVEDTPYYHCCSRVVRRAFLCGDDVYSGKNNDHRRAWVESLLFELEAVFAIDVAAFAVMSNHLHVVLRVDID SANRWTDREVLEQWHKLFKGDELTQKFAKGELVEAHEVHRLKHSIAIYRSRLCDISCQCFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16647; Mature: 16516
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPRRTQISVEDTPYYHCCSRVVRRAFLCGDDVYSGKNNDHRRAWVESLLFELEAVFAI CCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DVAAFAVMSNHLHVVLRVDIDSANRWTDREVLEQWHKLFKGDELTQKFAKGELVEAHEVH HHHHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHH RLKHSIAIYRSRLCDISCQCFQ HHHHHHHHHHHHHCCCCCEECC >Mature Secondary Structure PRPRRTQISVEDTPYYHCCSRVVRRAFLCGDDVYSGKNNDHRRAWVESLLFELEAVFAI CCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DVAAFAVMSNHLHVVLRVDIDSANRWTDREVLEQWHKLFKGDELTQKFAKGELVEAHEVH HHHHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHH RLKHSIAIYRSRLCDISCQCFQ HHHHHHHHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA