| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yigI [C]
Identifier: 160874951
GI number: 160874951
Start: 2200700
End: 2201197
Strand: Direct
Name: yigI [C]
Synonym: Sbal195_1836
Alternate gene names: 160874951
Gene position: 2200700-2201197 (Clockwise)
Preceding gene: 160874950
Following gene: 160874952
Centisome position: 41.16
GC content: 46.39
Gene sequence:
>498_bases ATGAGCGCAAATAATTCGGAACTTGGCACAGCCAGTCCCACTCAACACGCCCAAGTAAAAGCACCTATCGATGTGCAAGG CATTGTTAAGCGCGCCACTGAGCTTAACGATTTTGGTCATTTACTTGAGCACGTTCCCTATGCCAAATTTATTGGCATGA AGGTGGAACGTTTTGGTGATGAACTGATTTTTAAATTGCCTGCTAAGGACGACAATATCGGTAATCCTGTGTTGCCAGCT ATCCATGGCGGCGTCATTGCAGGTTTTATGGAGATGTCAGCGATAGTGCAGTTGATGGTCTTTATGCAAACAGCCAAAGT GCCTAAAGTGGTCGATTTTTCTATCGACTATTTGCGTGCAGGCCTGCATAAAGATAGCTTTGCTGAATGTCGTATTACCC GTCAGGGGCGACGAGTGGCCAACGTGAATATCGATTGTTGGCAAACCAATCGTAAGCAGCTCATCGCTACGGCACGGGCG CACTTTCTGATTGATTAA
Upstream 100 bases:
>100_bases CATGCTGTTGGTTCCTTTATGCGGATCAGCCCGGAAATGGTCGGTGATGCCTTTAGACAAGCGTTGATGGGTGAAGCTGT GCCTGAGATAGGAGATACTG
Downstream 100 bases:
>100_bases CTCGTTTTATTGAGCAGATGTTCGAGTGATGATTAAGTCTGTCTTGTTAAGCATAAGTTCAGCACAGTTCGATTAGCTTG TCGTTTAATGGGAAATGGTG
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Thioesterase Superfamily; Phenylacetic Acid Degradation-Like Protein; Thioesterase Family Protein Domain Protein; Protein Possibly Involved In Aromatic Compounds Catabolism
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSANNSELGTASPTQHAQVKAPIDVQGIVKRATELNDFGHLLEHVPYAKFIGMKVERFGDELIFKLPAKDDNIGNPVLPA IHGGVIAGFMEMSAIVQLMVFMQTAKVPKVVDFSIDYLRAGLHKDSFAECRITRQGRRVANVNIDCWQTNRKQLIATARA HFLID
Sequences:
>Translated_165_residues MSANNSELGTASPTQHAQVKAPIDVQGIVKRATELNDFGHLLEHVPYAKFIGMKVERFGDELIFKLPAKDDNIGNPVLPA IHGGVIAGFMEMSAIVQLMVFMQTAKVPKVVDFSIDYLRAGLHKDSFAECRITRQGRRVANVNIDCWQTNRKQLIATARA HFLID >Mature_164_residues SANNSELGTASPTQHAQVKAPIDVQGIVKRATELNDFGHLLEHVPYAKFIGMKVERFGDELIFKLPAKDDNIGNPVLPAI HGGVIAGFMEMSAIVQLMVFMQTAKVPKVVDFSIDYLRAGLHKDSFAECRITRQGRRVANVNIDCWQTNRKQLIATARAH FLID
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18314; Mature: 18183
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANNSELGTASPTQHAQVKAPIDVQGIVKRATELNDFGHLLEHVPYAKFIGMKVERFGD CCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC ELIFKLPAKDDNIGNPVLPAIHGGVIAGFMEMSAIVQLMVFMQTAKVPKVVDFSIDYLRA EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH GLHKDSFAECRITRQGRRVANVNIDCWQTNRKQLIATARAHFLID CCCCCCHHHHHEECCCCEEEECCEEEEECCHHHHHHHHHHHHCCC >Mature Secondary Structure SANNSELGTASPTQHAQVKAPIDVQGIVKRATELNDFGHLLEHVPYAKFIGMKVERFGD CCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC ELIFKLPAKDDNIGNPVLPAIHGGVIAGFMEMSAIVQLMVFMQTAKVPKVVDFSIDYLRA EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH GLHKDSFAECRITRQGRRVANVNIDCWQTNRKQLIATARAHFLID CCCCCCHHHHHEECCCCEEEECCEEEEECCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA