Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160874952

Identifier: 160874952

GI number: 160874952

Start: 2201285

End: 2201734

Strand: Direct

Name: 160874952

Synonym: Sbal195_1837

Alternate gene names: NA

Gene position: 2201285-2201734 (Clockwise)

Preceding gene: 160874951

Following gene: 160874953

Centisome position: 41.17

GC content: 50.44

Gene sequence:

>450_bases
ATGGGAAATGGTGCGCGCTGGCCGCGCATTTTGTCGCGTGACTGGGAGAAAGAGATGAAACAAATTTATACAGGACTATT
ATTGGCCGCGGCCCTGACCTTAGGCGCTTGTGCCTCACATACCGCAGGTATTTCAGTGAGTTCGCTCGGTGAAACCCGTG
TCGATAATACCAGTTTTGCCCGAGATATTGCGGTTGAAAGTGTGGATGCACGCCGAGTTGGTGATTTAGTGCAGGGTTCA
GCGCTGATTGTCAGCAAATCGTCTACCGATATGCGTGTGCAGTATAAATTCACTTGGTACGACGCCAGCGGCTTTACTAT
CGAAGATGAAGCGACGAGCTGGAAATCAGTCAAGTTGCATGGCAAGCAACAATTGCAAGTCGCCGCCGTGGCGCCCAATG
CCCAAGCGGTTAAATTTGATGTGTACGTGCGCGAAACCTTTTCGAACTAA

Upstream 100 bases:

>100_bases
TCTGATTGATTAACTCGTTTTATTGAGCAGATGTTCGAGTGATGATTAAGTCTGTCTTGTTAAGCATAAGTTCAGCACAG
TTCGATTAGCTTGTCGTTTA

Downstream 100 bases:

>100_bases
GCGGTGAGTTCGCCTTTGTTTAGTTTATAAATTATTTTTGATATAAAACGATTGTTATAATGGCTTACTTCTTTCAGGAG
TAAGCCATTTTTATCCGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MGNGARWPRILSRDWEKEMKQIYTGLLLAAALTLGACASHTAGISVSSLGETRVDNTSFARDIAVESVDARRVGDLVQGS
ALIVSKSSTDMRVQYKFTWYDASGFTIEDEATSWKSVKLHGKQQLQVAAVAPNAQAVKFDVYVRETFSN

Sequences:

>Translated_149_residues
MGNGARWPRILSRDWEKEMKQIYTGLLLAAALTLGACASHTAGISVSSLGETRVDNTSFARDIAVESVDARRVGDLVQGS
ALIVSKSSTDMRVQYKFTWYDASGFTIEDEATSWKSVKLHGKQQLQVAAVAPNAQAVKFDVYVRETFSN
>Mature_148_residues
GNGARWPRILSRDWEKEMKQIYTGLLLAAALTLGACASHTAGISVSSLGETRVDNTSFARDIAVESVDARRVGDLVQGSA
LIVSKSSTDMRVQYKFTWYDASGFTIEDEATSWKSVKLHGKQQLQVAAVAPNAQAVKFDVYVRETFSN

Specific function: Unknown

COG id: COG5633

COG function: function code R; Predicted periplasmic lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16320; Mature: 16188

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNGARWPRILSRDWEKEMKQIYTGLLLAAALTLGACASHTAGISVSSLGETRVDNTSFA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHH
RDIAVESVDARRVGDLVQGSALIVSKSSTDMRVQYKFTWYDASGFTIEDEATSWKSVKLH
HHHHHHCCCHHHHHHHHCCCEEEEEECCCCEEEEEEEEEECCCCCEECCCCCCEEEEEEC
GKQQLQVAAVAPNAQAVKFDVYVRETFSN
CCCEEEEEEECCCCCEEEEEEEEEEECCC
>Mature Secondary Structure 
GNGARWPRILSRDWEKEMKQIYTGLLLAAALTLGACASHTAGISVSSLGETRVDNTSFA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHH
RDIAVESVDARRVGDLVQGSALIVSKSSTDMRVQYKFTWYDASGFTIEDEATSWKSVKLH
HHHHHHCCCHHHHHHHHCCCEEEEEECCCCEEEEEEEEEECCCCCEECCCCCCEEEEEEC
GKQQLQVAAVAPNAQAVKFDVYVRETFSN
CCCEEEEEEECCCCCEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA