| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874940
Identifier: 160874940
GI number: 160874940
Start: 2191000
End: 2191374
Strand: Reverse
Name: 160874940
Synonym: Sbal195_1825
Alternate gene names: NA
Gene position: 2191374-2191000 (Counterclockwise)
Preceding gene: 160874941
Following gene: 160874939
Centisome position: 40.98
GC content: 44.0
Gene sequence:
>375_bases ATGACGTCCAACACCTTATTTACCCTTAGCCGTTTAGGTTACTTCGCGCTCGTTCTGCTATTAGGCGGCTGGTTTGTTGG CCAAGGGATTAGCGGTGAATACACTCTGCTATTTAGCCTATTATGGATAGTGCCATTATTACTACCTGCAAAAGGGGTTT TCCAAGGTAATCCATATACTTATGCTTGGGCGAGTTTTGTTCTGTGCCTTTATATGCTGCATGGACTGACACTGCTTTAT GTTACTACCGATGCCTTCGCTTTTGCATTAATCGAAGTATTGTTGATTGGTGTACTGCTGATTGCCTTCCCCTTCTACGC TCGGATCCGTGGTCGTGAACTGGGATTAGGCCTGAAGAAAAAGTCTAAAGAATAA
Upstream 100 bases:
>100_bases ACGCGCTGCCATCGGCCGTCCTCCAGAGAATGTGCTCGCTATTCTTTAATCCATGATTTTAAAACAAAAATCGCTTTAAT TTTAATCGTTAGGTAGACAT
Downstream 100 bases:
>100_bases GCCATTACATACAATGTGATATCAGTGCCGTCTTAACTTACTGGGTATGACGGCATTTTTATATCGCAACGCCAAACTCC GCTGCAGATCTGGGTTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTSNTLFTLSRLGYFALVLLLGGWFVGQGISGEYTLLFSLLWIVPLLLPAKGVFQGNPYTYAWASFVLCLYMLHGLTLLY VTTDAFAFALIEVLLIGVLLIAFPFYARIRGRELGLGLKKKSKE
Sequences:
>Translated_124_residues MTSNTLFTLSRLGYFALVLLLGGWFVGQGISGEYTLLFSLLWIVPLLLPAKGVFQGNPYTYAWASFVLCLYMLHGLTLLY VTTDAFAFALIEVLLIGVLLIAFPFYARIRGRELGLGLKKKSKE >Mature_123_residues TSNTLFTLSRLGYFALVLLLGGWFVGQGISGEYTLLFSLLWIVPLLLPAKGVFQGNPYTYAWASFVLCLYMLHGLTLLYV TTDAFAFALIEVLLIGVLLIAFPFYARIRGRELGLGLKKKSKE
Specific function: Unknown
COG id: COG3308
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13817; Mature: 13686
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNTLFTLSRLGYFALVLLLGGWFVGQGISGEYTLLFSLLWIVPLLLPAKGVFQGNPYT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCH YAWASFVLCLYMLHGLTLLYVTTDAFAFALIEVLLIGVLLIAFPFYARIRGRELGLGLKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC KSKE CCCC >Mature Secondary Structure TSNTLFTLSRLGYFALVLLLGGWFVGQGISGEYTLLFSLLWIVPLLLPAKGVFQGNPYT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCH YAWASFVLCLYMLHGLTLLYVTTDAFAFALIEVLLIGVLLIAFPFYARIRGRELGLGLKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC KSKE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA