| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160874939
Identifier: 160874939
GI number: 160874939
Start: 2188723
End: 2190678
Strand: Reverse
Name: 160874939
Synonym: Sbal195_1824
Alternate gene names: NA
Gene position: 2190678-2188723 (Counterclockwise)
Preceding gene: 160874940
Following gene: 160874936
Centisome position: 40.97
GC content: 49.64
Gene sequence:
>1956_bases ATGGGGATATCGATGCCACTGAAGCTTTTGGGATTAATGGCCTGCTCAAGCCTACTCATGGCGTGCGGAGGCGGTGGAGA CAGCAACACAGATAATGGCGGAGTAACGCCCCCCTCCACCTCACTGCCACGCTGCACAGATAGCATTTCGCCGCTTCTTG TTACCACATCATCCTCAATCCGTTTTCAAACTGAACCGACTTATGTGGCAGGTCAATCCAGTGCCATCATTGCCAACATC CTTAATCGCGATAGCCAAAACTTAACCTTTCACTGGCAGCAAATCGATGGACCTATCATACAATTAGTCAGTCAAAACAG CCCGGTATTAGCCTTTGATACTCCCACCGCAGGCGGCTACCGTTTTAGCTTACATGTCACGGGAAGTAATCTAGATGTCA GCGGAGAAATCGGCATTAATGTCGATCCCGCATCGACGGGTGTACTGAACGTCCGCCAAGATCACCAAGTGGTTGAAGGT AATAATGTCAGCTTAAGGCTCGGACAACAATCAGGATTAAGCGCAGCGAATATCTCTTGGTGCGTAGCGTCTGGCCCAGA TTTACTGGTCGATGTAAGCGATCCGTTTAGGCCTTTATTTACCGCGCCAACGGTCGCCCAAGATACAATCACTCGGCTCA AAGTGAACGCCAGTATCAACGGTAATCCACTCAGTGATGATGCCTTTGTGCTAACAACTGCGGCGCCGGCGATCAGCTCG CAATATTTCGATACTCCAGTGGCGCGCACTCACGCCTATCGTCCCGCCTCGCCTTACGCCAATGTACTAGCGGGCTGTGT TTACTCTAATCAGCTTAATGATAGTTGCACTATCAATACCTTACCTTTGATAGGACAAACCTCAAGCGATCTAAATCGCG AGACAATTCTTAATCGTGTACTTGTTTCCCACGACTGGATGGGCGATAACTTTGCCGCCTTTTTAGCCCAGATGGACCCC AACAGCGATTTTGCTCGCCTGTTACAATCCGTCACGGCCGTGGTGATTAGCTATGACGTGCGCCCTTCCTTCTATTGGGT AGTTACAGGAGCAATTTATCTCGATCCCGACGATTTATGGCTGACGCCAAGCCAGCGCGACACCATTAATGAGGCGCCGG ATTACCGCAGTAATTTCGGTGATGATCTTAACTTTGTGATGCCTTGGCGTTATGTCAAAGACAATCAATATGCGTCACTT GGCGTACCTATCGCCGTCAGAGCAGACCGAACATTAGCGCAAATCAATCCCGATCTAGCCTCCTTGCTGTATCACGAGCT AGCCCATGCCAATGACTTCTTCCCCCGCAGCGTACATGCCTCACTCACAGGGCCAAGACTGCTAGATGATTACAGTCGCC GCAATGCCAACAAGAGCCTGATATCTGATCAAGTCAGCACCAGCTATCCATTAATGAGCACTGAAATGATGGGGCTTGCC AATGTCCGTTTCCTCGGCGCAGCAGCGAGTAATGCACAGAAGGCCTATCAACCATCGGATGTGAGTACATTCTTTTCTAC CGATATCGCCAGCGACTTCTATGCCTATTCCAGTACCCGTGAAGACACGGCTATGCTATTTGAAGAAGCCATGATGAGTT ATCGCTATCAAATATTGCGTGATGTCGCCGTCACCAATAAACCTGCAGTGTTAACCGCTGATACGCTGATTATTGATTGG GGACAAAGAGGTCGAATTGCACAAGACAGTCTAGAAAATCGCGCCGCACTGGTGATTGATGAAATTCTACCAGAGCTTGA TGGCATCAGTCTGATAGAAAGCCTTCCCGAACCGATTGCCATGACCCAAGGTCAAAGCTGGCGTCAAACATTAGCCATAT CGCCTGCGAATGCGCAGCTCAAAGGCCAAAATAATGCCCCGGCAAACGATGTACTGCCACGCTTTGAGCCTGAACTTCAC TTAAGTGGCGACCGTCACCGTCATCCTCAGCAATAG
Upstream 100 bases:
>100_bases TCCTCGTGCTATAGTCAGTTTCTCATCGTGGGTCCTTAGTATCCCGTGAGTCACAAAAAAGTCTAATCGCACTGCTGAGT TAACAAGGGAGAATGCTGTA
Downstream 100 bases:
>100_bases AGTGTTTAAGTTGTAGATAAACAAAAGCCCGTCTGCATTCAGCATGACGGGCTTTTGATTTTTAGGTTTTAGGGATTTTA CATTTTTTAGCGTTTACATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 651; Mature: 650
Protein sequence:
>651_residues MGISMPLKLLGLMACSSLLMACGGGGDSNTDNGGVTPPSTSLPRCTDSISPLLVTTSSSIRFQTEPTYVAGQSSAIIANI LNRDSQNLTFHWQQIDGPIIQLVSQNSPVLAFDTPTAGGYRFSLHVTGSNLDVSGEIGINVDPASTGVLNVRQDHQVVEG NNVSLRLGQQSGLSAANISWCVASGPDLLVDVSDPFRPLFTAPTVAQDTITRLKVNASINGNPLSDDAFVLTTAAPAISS QYFDTPVARTHAYRPASPYANVLAGCVYSNQLNDSCTINTLPLIGQTSSDLNRETILNRVLVSHDWMGDNFAAFLAQMDP NSDFARLLQSVTAVVISYDVRPSFYWVVTGAIYLDPDDLWLTPSQRDTINEAPDYRSNFGDDLNFVMPWRYVKDNQYASL GVPIAVRADRTLAQINPDLASLLYHELAHANDFFPRSVHASLTGPRLLDDYSRRNANKSLISDQVSTSYPLMSTEMMGLA NVRFLGAAASNAQKAYQPSDVSTFFSTDIASDFYAYSSTREDTAMLFEEAMMSYRYQILRDVAVTNKPAVLTADTLIIDW GQRGRIAQDSLENRAALVIDEILPELDGISLIESLPEPIAMTQGQSWRQTLAISPANAQLKGQNNAPANDVLPRFEPELH LSGDRHRHPQQ
Sequences:
>Translated_651_residues MGISMPLKLLGLMACSSLLMACGGGGDSNTDNGGVTPPSTSLPRCTDSISPLLVTTSSSIRFQTEPTYVAGQSSAIIANI LNRDSQNLTFHWQQIDGPIIQLVSQNSPVLAFDTPTAGGYRFSLHVTGSNLDVSGEIGINVDPASTGVLNVRQDHQVVEG NNVSLRLGQQSGLSAANISWCVASGPDLLVDVSDPFRPLFTAPTVAQDTITRLKVNASINGNPLSDDAFVLTTAAPAISS QYFDTPVARTHAYRPASPYANVLAGCVYSNQLNDSCTINTLPLIGQTSSDLNRETILNRVLVSHDWMGDNFAAFLAQMDP NSDFARLLQSVTAVVISYDVRPSFYWVVTGAIYLDPDDLWLTPSQRDTINEAPDYRSNFGDDLNFVMPWRYVKDNQYASL GVPIAVRADRTLAQINPDLASLLYHELAHANDFFPRSVHASLTGPRLLDDYSRRNANKSLISDQVSTSYPLMSTEMMGLA NVRFLGAAASNAQKAYQPSDVSTFFSTDIASDFYAYSSTREDTAMLFEEAMMSYRYQILRDVAVTNKPAVLTADTLIIDW GQRGRIAQDSLENRAALVIDEILPELDGISLIESLPEPIAMTQGQSWRQTLAISPANAQLKGQNNAPANDVLPRFEPELH LSGDRHRHPQQ >Mature_650_residues GISMPLKLLGLMACSSLLMACGGGGDSNTDNGGVTPPSTSLPRCTDSISPLLVTTSSSIRFQTEPTYVAGQSSAIIANIL NRDSQNLTFHWQQIDGPIIQLVSQNSPVLAFDTPTAGGYRFSLHVTGSNLDVSGEIGINVDPASTGVLNVRQDHQVVEGN NVSLRLGQQSGLSAANISWCVASGPDLLVDVSDPFRPLFTAPTVAQDTITRLKVNASINGNPLSDDAFVLTTAAPAISSQ YFDTPVARTHAYRPASPYANVLAGCVYSNQLNDSCTINTLPLIGQTSSDLNRETILNRVLVSHDWMGDNFAAFLAQMDPN SDFARLLQSVTAVVISYDVRPSFYWVVTGAIYLDPDDLWLTPSQRDTINEAPDYRSNFGDDLNFVMPWRYVKDNQYASLG VPIAVRADRTLAQINPDLASLLYHELAHANDFFPRSVHASLTGPRLLDDYSRRNANKSLISDQVSTSYPLMSTEMMGLAN VRFLGAAASNAQKAYQPSDVSTFFSTDIASDFYAYSSTREDTAMLFEEAMMSYRYQILRDVAVTNKPAVLTADTLIIDWG QRGRIAQDSLENRAALVIDEILPELDGISLIESLPEPIAMTQGQSWRQTLAISPANAQLKGQNNAPANDVLPRFEPELHL SGDRHRHPQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70864; Mature: 70733
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGISMPLKLLGLMACSSLLMACGGGGDSNTDNGGVTPPSTSLPRCTDSISPLLVTTSSSI CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCE RFQTEPTYVAGQSSAIIANILNRDSQNLTFHWQQIDGPIIQLVSQNSPVLAFDTPTAGGY EEECCCCEEECCCCHHHHHHHCCCCCCEEEEEEECCCHHHHHCCCCCCEEEEECCCCCCE RFSLHVTGSNLDVSGEIGINVDPASTGVLNVRQDHQVVEGNNVSLRLGQQSGLSAANISW EEEEEEECCCEEECCEECEEECCCCCCEEEECCCCEEECCCCEEEEECCCCCCCCCCEEE CVASGPDLLVDVSDPFRPLFTAPTVAQDTITRLKVNASINGNPLSDDAFVLTTAAPAISS EEECCCCEEEECCCCCCCCCCCCCHHHHCEEEEEEEEECCCCCCCCCCEEEEECCCHHCC QYFDTPVARTHAYRPASPYANVLAGCVYSNQLNDSCTINTLPLIGQTSSDLNRETILNRV HHCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHH LVSHDWMGDNFAAFLAQMDPNSDFARLLQSVTAVVISYDVRPSFYWVVTGAIYLDPDDLW HHHCCCCCCCHHHHHEECCCCHHHHHHHHHHHEEEEEECCCCCEEEEEEEEEEECCCCEE LTPSQRDTINEAPDYRSNFGDDLNFVMPWRYVKDNQYASLGVPIAVRADRTLAQINPDLA ECCCCCCCCCCCCCHHHCCCCCCCEEECEEEECCCCEEECCCCEEEECCCHHHHCCHHHH SLLYHELAHANDFFPRSVHASLTGPRLLDDYSRRNANKSLISDQVSTSYPLMSTEMMGLA HHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHC NVRFLGAAASNAQKAYQPSDVSTFFSTDIASDFYAYSSTREDTAMLFEEAMMSYRYQILR CEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DVAVTNKPAVLTADTLIIDWGQRGRIAQDSLENRAALVIDEILPELDGISLIESLPEPIA HHHHCCCCEEEEEEEEEEECCCCCCCHHHHHCCCHHHHHHHHHCCCCCHHHHHHCCCCHH MTQGQSWRQTLAISPANAQLKGQNNAPANDVLPRFEPELHLSGDRHRHPQQ HCCCCCHHHEEEECCCCCEEECCCCCCHHHCCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure GISMPLKLLGLMACSSLLMACGGGGDSNTDNGGVTPPSTSLPRCTDSISPLLVTTSSSI CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCE RFQTEPTYVAGQSSAIIANILNRDSQNLTFHWQQIDGPIIQLVSQNSPVLAFDTPTAGGY EEECCCCEEECCCCHHHHHHHCCCCCCEEEEEEECCCHHHHHCCCCCCEEEEECCCCCCE RFSLHVTGSNLDVSGEIGINVDPASTGVLNVRQDHQVVEGNNVSLRLGQQSGLSAANISW EEEEEEECCCEEECCEECEEECCCCCCEEEECCCCEEECCCCEEEEECCCCCCCCCCEEE CVASGPDLLVDVSDPFRPLFTAPTVAQDTITRLKVNASINGNPLSDDAFVLTTAAPAISS EEECCCCEEEECCCCCCCCCCCCCHHHHCEEEEEEEEECCCCCCCCCCEEEEECCCHHCC QYFDTPVARTHAYRPASPYANVLAGCVYSNQLNDSCTINTLPLIGQTSSDLNRETILNRV HHCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHH LVSHDWMGDNFAAFLAQMDPNSDFARLLQSVTAVVISYDVRPSFYWVVTGAIYLDPDDLW HHHCCCCCCCHHHHHEECCCCHHHHHHHHHHHEEEEEECCCCCEEEEEEEEEEECCCCEE LTPSQRDTINEAPDYRSNFGDDLNFVMPWRYVKDNQYASLGVPIAVRADRTLAQINPDLA ECCCCCCCCCCCCCHHHCCCCCCCEEECEEEECCCCEEECCCCEEEECCCHHHHCCHHHH SLLYHELAHANDFFPRSVHASLTGPRLLDDYSRRNANKSLISDQVSTSYPLMSTEMMGLA HHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHC NVRFLGAAASNAQKAYQPSDVSTFFSTDIASDFYAYSSTREDTAMLFEEAMMSYRYQILR CEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DVAVTNKPAVLTADTLIIDWGQRGRIAQDSLENRAALVIDEILPELDGISLIESLPEPIA HHHHCCCCEEEEEEEEEEECCCCCCCHHHHHCCCHHHHHHHHHCCCCCHHHHHHCCCCHH MTQGQSWRQTLAISPANAQLKGQNNAPANDVLPRFEPELHLSGDRHRHPQQ HCCCCCHHHEEEECCCCCEEECCCCCCHHHCCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA