| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is grxD [H]
Identifier: 160874935
GI number: 160874935
Start: 2184753
End: 2185085
Strand: Direct
Name: grxD [H]
Synonym: Sbal195_1820
Alternate gene names: 160874935
Gene position: 2184753-2185085 (Clockwise)
Preceding gene: 160874930
Following gene: 160874937
Centisome position: 40.86
GC content: 44.44
Gene sequence:
>333_bases ATGGAAACAGTAGAGAAAATTAAGCAGCAGATCACGGAAAACCCTATCATTGTTTATATGAAAGGTTCTCCTAAGTTGCC TAGCTGTGGCTTCTCGTCACAGGTAGCTCAGATCATGATTAACTGCGGTGAGCAGTTTGCATTCGTGGATATTCTTCAGC ATCCAGACATTCGCGCAGAATTACCTAAGTTTGCTAACTGGCCGACTTTCCCACAATTGTGGGTCGAAGGTGAGTTGATC GGCGGCTGTGATATCGTCGTGGACATGTTCCAAAAAGGCGAATTACAACCTTTGATCAAAGCTGCTGCCGCTAAGATCAA GACTGAAGAATAA
Upstream 100 bases:
>100_bases CAAATGTCGGCATAACCTTACAAACTGTGGGATTTTGTTCTGCCTCTAGCTGACGTACAATAGTCGCATTGAGTCAATGT CATCCTACTTAGGAATCAAA
Downstream 100 bases:
>100_bases GCGTTAATGCTTTTTTTATAAGTATGAATGAAAAAGCCGCCATGATTAATATCACGGCGGCTTTTTTGTCGCTGTTTTTC AAAGAGCTATCGCTACAAAA
Product: glutaredoxin-like protein
Products: NA
Alternate protein names: Grx4; Monothiol glutaredoxin [H]
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues METVEKIKQQITENPIIVYMKGSPKLPSCGFSSQVAQIMINCGEQFAFVDILQHPDIRAELPKFANWPTFPQLWVEGELI GGCDIVVDMFQKGELQPLIKAAAAKIKTEE
Sequences:
>Translated_110_residues METVEKIKQQITENPIIVYMKGSPKLPSCGFSSQVAQIMINCGEQFAFVDILQHPDIRAELPKFANWPTFPQLWVEGELI GGCDIVVDMFQKGELQPLIKAAAAKIKTEE >Mature_110_residues METVEKIKQQITENPIIVYMKGSPKLPSCGFSSQVAQIMINCGEQFAFVDILQHPDIRAELPKFANWPTFPQLWVEGELI GGCDIVVDMFQKGELQPLIKAAAAKIKTEE
Specific function: Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters [H]
COG id: COG0278
COG function: function code O; Glutaredoxin-related protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI95113651, Length=97, Percent_Identity=38.1443298969072, Blast_Score=92, Evalue=1e-19, Organism=Homo sapiens, GI42516576, Length=92, Percent_Identity=38.0434782608696, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1787943, Length=108, Percent_Identity=74.0740740740741, Blast_Score=182, Evalue=3e-48, Organism=Caenorhabditis elegans, GI71988153, Length=82, Percent_Identity=36.5853658536585, Blast_Score=82, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17556042, Length=98, Percent_Identity=32.6530612244898, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71988159, Length=80, Percent_Identity=38.75, Blast_Score=79, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6325198, Length=112, Percent_Identity=38.3928571428571, Blast_Score=95, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6321022, Length=72, Percent_Identity=48.6111111111111, Blast_Score=87, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6320303, Length=81, Percent_Identity=43.2098765432099, Blast_Score=86, Evalue=1e-18, Organism=Drosophila melanogaster, GI24642023, Length=93, Percent_Identity=41.9354838709677, Blast_Score=95, Evalue=7e-21, Organism=Drosophila melanogaster, GI19921242, Length=97, Percent_Identity=37.1134020618557, Blast_Score=85, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002109 - InterPro: IPR014434 - InterPro: IPR004480 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 12307; Mature: 12307
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METVEKIKQQITENPIIVYMKGSPKLPSCGFSSQVAQIMINCGEQFAFVDILQHPDIRAE CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCC LPKFANWPTFPQLWVEGELIGGCDIVVDMFQKGELQPLIKAAAAKIKTEE CCCCCCCCCCCCEEECCCEECCHHHHHHHHHCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure METVEKIKQQITENPIIVYMKGSPKLPSCGFSSQVAQIMINCGEQFAFVDILQHPDIRAE CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCC LPKFANWPTFPQLWVEGELIGGCDIVVDMFQKGELQPLIKAAAAKIKTEE CCCCCCCCCCCCEEECCCEECCHHHHHHHHHCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]