| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874924
Identifier: 160874924
GI number: 160874924
Start: 2170768
End: 2171343
Strand: Direct
Name: 160874924
Synonym: Sbal195_1809
Alternate gene names: NA
Gene position: 2170768-2171343 (Clockwise)
Preceding gene: 160874923
Following gene: 160874925
Centisome position: 40.6
GC content: 39.76
Gene sequence:
>576_bases ATGAAAAAATGGATGGGAATTGTCGCCTTATCGGCTATGGCCAGTTTTAGCTGCGCCGCGCAATGGCAAGTGATGGATCA AGATTCGCGAGTCAGTTTTATTTCGGTAAAGAAAGGTGACATTGGTGAAGTCCATCACTTTAAACAACTCAAAGGTACGC TAAAAGAGGATGGTCAATTCGAATTAACCATTCCGTTAATTGGCGTCGCCACTGGTATTGATGTCCGCGATGAGCGGATG CAGAATTTATTGTTTGAAGTGTCTTTATATCCTGAGCTCAAACTATCGTCTCAAGTTGACACTAAGATGCTAAAAGATCT TGGCATTGGCGAGACTAAAGTTGTTGATATCGATGGTAAAATTGCATTGCATGGTAAATCGCAAACAAAGACTTTTTCGG TTATTATCACTAAAGTTTCTGATAACAAGCTGTTAGTGAACAGTTTTCAGCCGATAATTGTGAATGCCAATGAGTTTGAT CTTGTCGATGGGATTGATAAATTACGTGAAATTGCGGGTTTATCGAGTATTAGCCAAGCTGTTCCTGTGTCATTTGTACT AACCTTAACTCAGTAA
Upstream 100 bases:
>100_bases TGATGTGGATCACGTTTAACTGGGCAGGATTTTCGCCTGCTGCAGATGTCGATTTGCTTTACTGCATGGCTTTTAAACTC ACTTTTTGAGGACTGATACG
Downstream 100 bases:
>100_bases CTTCAATAAGATTGGTGTAGATCAATACGTCGGTTATCGAAGATAGGCTAGAGTTGAATAAGTGGCGTATGCTGGATCTC GATGAGAAGCCGAACTTTCG
Product: YceI family protein
Products: NA
Alternate protein names: YceI Like Family; YceI Like Family Protein; YceI-Like Family Protein
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKKWMGIVALSAMASFSCAAQWQVMDQDSRVSFISVKKGDIGEVHHFKQLKGTLKEDGQFELTIPLIGVATGIDVRDERM QNLLFEVSLYPELKLSSQVDTKMLKDLGIGETKVVDIDGKIALHGKSQTKTFSVIITKVSDNKLLVNSFQPIIVNANEFD LVDGIDKLREIAGLSSISQAVPVSFVLTLTQ
Sequences:
>Translated_191_residues MKKWMGIVALSAMASFSCAAQWQVMDQDSRVSFISVKKGDIGEVHHFKQLKGTLKEDGQFELTIPLIGVATGIDVRDERM QNLLFEVSLYPELKLSSQVDTKMLKDLGIGETKVVDIDGKIALHGKSQTKTFSVIITKVSDNKLLVNSFQPIIVNANEFD LVDGIDKLREIAGLSSISQAVPVSFVLTLTQ >Mature_191_residues MKKWMGIVALSAMASFSCAAQWQVMDQDSRVSFISVKKGDIGEVHHFKQLKGTLKEDGQFELTIPLIGVATGIDVRDERM QNLLFEVSLYPELKLSSQVDTKMLKDLGIGETKVVDIDGKIALHGKSQTKTFSVIITKVSDNKLLVNSFQPIIVNANEFD LVDGIDKLREIAGLSSISQAVPVSFVLTLTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21027; Mature: 21027
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKWMGIVALSAMASFSCAAQWQVMDQDSRVSFISVKKGDIGEVHHFKQLKGTLKEDGQF CCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEE ELTIPLIGVATGIDVRDERMQNLLFEVSLYPELKLSSQVDTKMLKDLGIGETKVVDIDGK EEEEEEEEEECCCCCHHHHHHHHEEEEEECCCEECCCHHHHHHHHHCCCCCEEEEEECCE IALHGKSQTKTFSVIITKVSDNKLLVNSFQPIIVNANEFDLVDGIDKLREIAGLSSISQA EEEECCCCCEEEEEEEEEECCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHCHHHHHHH VPVSFVLTLTQ CCEEEEEEECC >Mature Secondary Structure MKKWMGIVALSAMASFSCAAQWQVMDQDSRVSFISVKKGDIGEVHHFKQLKGTLKEDGQF CCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEE ELTIPLIGVATGIDVRDERMQNLLFEVSLYPELKLSSQVDTKMLKDLGIGETKVVDIDGK EEEEEEEEEECCCCCHHHHHHHHEEEEEECCCEECCCHHHHHHHHHCCCCCEEEEEECCE IALHGKSQTKTFSVIITKVSDNKLLVNSFQPIIVNANEFDLVDGIDKLREIAGLSSISQA EEEECCCCCEEEEEEEEEECCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHCHHHHHHH VPVSFVLTLTQ CCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA