| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yaiI [C]
Identifier: 160874923
GI number: 160874923
Start: 2170160
End: 2170612
Strand: Direct
Name: yaiI [C]
Synonym: Sbal195_1808
Alternate gene names: 160874923
Gene position: 2170160-2170612 (Clockwise)
Preceding gene: 160874922
Following gene: 160874924
Centisome position: 40.58
GC content: 49.67
Gene sequence:
>453_bases TTGAGTGATTATAAAATTTGGGTTGATGCGGACGCATGCCCTAATCCCATTAAAGAAATCCTGTTCCGCGCGGCGGAGCG TAAAGCTTTGCCGCTGGTGCTGGTGGCCAATCAAATGATCCGTGTACCGCCATCGCCCTATATCAACCAAATTCGCGTTG GTGCGGGTTTTGATGTGGCGGATCAATACATTGTCTACCATGTCGAGCCGACGCATTTAGTGATCACCGCGGACATTCCC TTAGCGGCTTTAATCATCGAAAAGGGCGCCTTGGCACTCAATCCCCGCGGCGAGCTTTATACCGTCGATAACATAAAACA AAAGCTGACGATGCGCGATTTTATGGAAGATTTGCGGGGTTCAGGTGTGCACACCGGCGGGCCGGATTCGTTTTCCCAAG CGGATAAACAGGCTTTTGCCAATAGCTTAGATAAATGGCTAGTTAGAGTATGA
Upstream 100 bases:
>100_bases GTGGGAAATCGATCGTTTAGCGCCATAATACGCGCATAGTTCTGCATAGTATTGCCTAAAACTAAGCCTGTGAACCTAAC ACCAACAGAGTTAAAAGACA
Downstream 100 bases:
>100_bases AGCATAGTTTACTGGTCGCTAATGGATAAAAAGAGTATCTTTAGCTTAAGTTAGCTGATGTGGATCACGTTTAACTGGGC AGGATTTTCGCCTGCTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSDYKIWVDADACPNPIKEILFRAAERKALPLVLVANQMIRVPPSPYINQIRVGAGFDVADQYIVYHVEPTHLVITADIP LAALIIEKGALALNPRGELYTVDNIKQKLTMRDFMEDLRGSGVHTGGPDSFSQADKQAFANSLDKWLVRV
Sequences:
>Translated_150_residues MSDYKIWVDADACPNPIKEILFRAAERKALPLVLVANQMIRVPPSPYINQIRVGAGFDVADQYIVYHVEPTHLVITADIP LAALIIEKGALALNPRGELYTVDNIKQKLTMRDFMEDLRGSGVHTGGPDSFSQADKQAFANSLDKWLVRV >Mature_149_residues SDYKIWVDADACPNPIKEILFRAAERKALPLVLVANQMIRVPPSPYINQIRVGAGFDVADQYIVYHVEPTHLVITADIPL AALIIEKGALALNPRGELYTVDNIKQKLTMRDFMEDLRGSGVHTGGPDSFSQADKQAFANSLDKWLVRV
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family [H]
Homologues:
Organism=Escherichia coli, GI87081732, Length=145, Percent_Identity=68.9655172413793, Blast_Score=206, Evalue=6e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003791 [H]
Pfam domain/function: PF02639 DUF188 [H]
EC number: NA
Molecular weight: Translated: 16689; Mature: 16558
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDYKIWVDADACPNPIKEILFRAAERKALPLVLVANQMIRVPPSPYINQIRVGAGFDVA CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCCCEEEECCCCCCC DQYIVYHVEPTHLVITADIPLAALIIEKGALALNPRGELYTVDNIKQKLTMRDFMEDLRG CCEEEEEECCCEEEEEECCCEEEEEECCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHCC SGVHTGGPDSFSQADKQAFANSLDKWLVRV CCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDYKIWVDADACPNPIKEILFRAAERKALPLVLVANQMIRVPPSPYINQIRVGAGFDVA CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCCCEEEECCCCCCC DQYIVYHVEPTHLVITADIPLAALIIEKGALALNPRGELYTVDNIKQKLTMRDFMEDLRG CCEEEEEECCCEEEEEECCCEEEEEECCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHCC SGVHTGGPDSFSQADKQAFANSLDKWLVRV CCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA