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The map label for this gene is int [H]

Identifier: 160874836

GI number: 160874836

Start: 2068191

End: 2069150

Strand: Reverse

Name: int [H]

Synonym: Sbal195_1720

Alternate gene names: 160874836

Gene position: 2069150-2068191 (Counterclockwise)

Preceding gene: 160874851

Following gene: 160874834

Centisome position: 38.7

GC content: 41.56

Gene sequence:

>960_bases
ATGAGTATAAAAAGCCCTTTTTTAAGCGGTGTTCAAGAAGAAATGCGCATGCGTGGTTACAGTATCAGAACAGAAAAATC
CTACCTGTATTGGATCAAGGCGTTCATTAACTTTCACCACAAGCGTCATCCTGAAACGATGGGAACAGAGGAGGTCGCAC
AATTCTTAACCTTCCTTGCCAATCAACGGAATGTGGCTATCAACACTCAAAAAATTGCACTGAACGCGTTAGCCTATTTG
TACCAGAAACATTTGCATCATGAGCTTGGAAATTTAGGTTTTTGCTATGCCACTAAACAGCGTTATTTACCTACAGTGTT
ATCCCCTTCAGAAATCTCACTAATACTAAATGAGCTTGATGGCCGCGATAGGCTAATAATAGAACGACTCTATGGTAGTG
GACTGAGAGTTTCAGAATGCCTCAGGTTACGTATCCAAGATATTGATATTGAACAAGCTTCGTTGACTGTGAGGGATGGT
AAAGGTCATAAAGATAGACAAACAATCCTTAGCCATAAATGTGCCATTAAACTCACAGCATATATTAATAAGGCAATGGA
GATTCAACACCGTGACAACCAACAAGGGATCGGTCCTTCCCTACCCAATGCGTTAGAGCGTAAGTATCCACATGCCTTTA
AGCAACACGGATGGATGTTCATTTTCCCTTCAACCACAACCTGCATTAATCCTTATACAGGAACGCTTTGCAGGCATCAT
CTTCATCAGAGTGTTATTCGTAAAGCGCTCGGCAATGCGGTGCGTAACATCAAAATAACTAAGCGTGTTACCTGTCATAC
ATTTAGACATAGCTTTGCAACCCATCTACTTCAATCGGGCAGTGATATCAGAAGTGTTCAGGAGCTACTTGGCCATAATG
ACGTTAGTACAACACAAATCTACACCCATGTGCTTGGCCAACATTACGCAGGGACAACGAGTCCATTAGATAAGTTATAA

Upstream 100 bases:

>100_bases
ACATAAGTGTAAACCCGCAAAAAATTTTTACAATCTTCCTTGATTTCAGCGATTACTAAATAATACTGTACATATAAACA
GTGTCGCAAGGATTGCTATC

Downstream 100 bases:

>100_bases
ATTCTAAGTAATAAAGCAATCTCGATTGCCTCTAGTCGTATTACTAATTCAGGTCAACTAACACTTAACTTACAGAGTGT
TTGGGTTGCCCCGTAAAACA

Product: integron integrase

Products: NA

Alternate protein names: E2 protein [H]

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSIKSPFLSGVQEEMRMRGYSIRTEKSYLYWIKAFINFHHKRHPETMGTEEVAQFLTFLANQRNVAINTQKIALNALAYL
YQKHLHHELGNLGFCYATKQRYLPTVLSPSEISLILNELDGRDRLIIERLYGSGLRVSECLRLRIQDIDIEQASLTVRDG
KGHKDRQTILSHKCAIKLTAYINKAMEIQHRDNQQGIGPSLPNALERKYPHAFKQHGWMFIFPSTTTCINPYTGTLCRHH
LHQSVIRKALGNAVRNIKITKRVTCHTFRHSFATHLLQSGSDIRSVQELLGHNDVSTTQIYTHVLGQHYAGTTSPLDKL

Sequences:

>Translated_319_residues
MSIKSPFLSGVQEEMRMRGYSIRTEKSYLYWIKAFINFHHKRHPETMGTEEVAQFLTFLANQRNVAINTQKIALNALAYL
YQKHLHHELGNLGFCYATKQRYLPTVLSPSEISLILNELDGRDRLIIERLYGSGLRVSECLRLRIQDIDIEQASLTVRDG
KGHKDRQTILSHKCAIKLTAYINKAMEIQHRDNQQGIGPSLPNALERKYPHAFKQHGWMFIFPSTTTCINPYTGTLCRHH
LHQSVIRKALGNAVRNIKITKRVTCHTFRHSFATHLLQSGSDIRSVQELLGHNDVSTTQIYTHVLGQHYAGTTSPLDKL
>Mature_318_residues
SIKSPFLSGVQEEMRMRGYSIRTEKSYLYWIKAFINFHHKRHPETMGTEEVAQFLTFLANQRNVAINTQKIALNALAYLY
QKHLHHELGNLGFCYATKQRYLPTVLSPSEISLILNELDGRDRLIIERLYGSGLRVSECLRLRIQDIDIEQASLTVRDGK
GHKDRQTILSHKCAIKLTAYINKAMEIQHRDNQQGIGPSLPNALERKYPHAFKQHGWMFIFPSTTTCINPYTGTLCRHHL
HQSVIRKALGNAVRNIKITKRVTCHTFRHSFATHLLQSGSDIRSVQELLGHNDVSTTQIYTHVLGQHYAGTTSPLDKL

Specific function: Putative integrase believed to be involved in the insertion of antibiotic resistance genes into plasmids and transposons [H]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1789261, Length=237, Percent_Identity=29.535864978903, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1790244, Length=290, Percent_Identity=26.551724137931, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR011946
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 36584; Mature: 36452

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKSPFLSGVQEEMRMRGYSIRTEKSYLYWIKAFINFHHKRHPETMGTEEVAQFLTFLA
CCCCCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
NQRNVAINTQKIALNALAYLYQKHLHHELGNLGFCYATKQRYLPTVLSPSEISLILNELD
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCCCHHHHHHHHHCC
GRDRLIIERLYGSGLRVSECLRLRIQDIDIEQASLTVRDGKGHKDRQTILSHKCAIKLTA
CCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
YINKAMEIQHRDNQQGIGPSLPNALERKYPHAFKQHGWMFIFPSTTTCINPYTGTLCRHH
HHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHH
LHQSVIRKALGNAVRNIKITKRVTCHTFRHSFATHLLQSGSDIRSVQELLGHNDVSTTQI
HHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHH
YTHVLGQHYAGTTSPLDKL
HHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SIKSPFLSGVQEEMRMRGYSIRTEKSYLYWIKAFINFHHKRHPETMGTEEVAQFLTFLA
CCCCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
NQRNVAINTQKIALNALAYLYQKHLHHELGNLGFCYATKQRYLPTVLSPSEISLILNELD
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCCCHHHHHHHHHCC
GRDRLIIERLYGSGLRVSECLRLRIQDIDIEQASLTVRDGKGHKDRQTILSHKCAIKLTA
CCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
YINKAMEIQHRDNQQGIGPSLPNALERKYPHAFKQHGWMFIFPSTTTCINPYTGTLCRHH
HHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHH
LHQSVIRKALGNAVRNIKITKRVTCHTFRHSFATHLLQSGSDIRSVQELLGHNDVSTTQI
HHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHH
YTHVLGQHYAGTTSPLDKL
HHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2821509; 2823258; 3054482; 8195081; 2188588 [H]