| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is dinG [H]
Identifier: 160874769
GI number: 160874769
Start: 1992349
End: 1994421
Strand: Reverse
Name: dinG [H]
Synonym: Sbal195_1652
Alternate gene names: 160874769
Gene position: 1994421-1992349 (Counterclockwise)
Preceding gene: 160874777
Following gene: 160874768
Centisome position: 37.3
GC content: 48.67
Gene sequence:
>2073_bases ATGTTACCTGACAATGTAAAAACCCAGATCCGCGCCATCTATAAGGATATCGCTACCGCCTTGCCTCATTTTAGGCCGCG CCGCGAACAAAACTATATGGTGGCGGAAATCTCTAAGACCCTCGCCGGCGACTATGACAAAGATAGACGCATCATAGTGG TCGAAGCAGGGACTGGTATCGGTAAATCATTGTCTTATATTCTCGGTACCATTCCACTGGCATTAGCGAGCAAGAAAAAA GTCTGTATCGCCACCGCGACCGTCGCCCTGCAAGAACAATTACTGCATAAAGACTTGCCCTTCTTCCTTGAGCAATCCGG CTTAAATTTCCGCTTTGGCCTAGTCAAAGGTCGACAACGTTATGTGTGTCTATCGAAACTGGCGATGCTCATCGGTGACG ACAACAGTACACAAATGGCCATGTGGCAAACTAAGCCTGACAATAGCCAAGTGGCTATGATGCATGGCCTGTTAAAAGAC TATAACGAAGGTCGCTGGAACGGTGAAATCGATACCTTAGCCGTGCCGCTGCCCGATCATCTGTGGCAACAAATCGCCTG CGACAAACACAGCTGTCATCGCCAAGTCGCCAGCCACAGAAATTGCCCGTTCCATAAAGCCCGTGAAGATGTCGATACCT GGGACGTGCTCATCGCCAACCACAGCTTGTTATTTGCCGATTTAGAATTAGGTGGCGGCGTGATTTTGCCCGATCCCGAA GACGTGTTTTATGTTATCGATGAGGCACATCACTTACCCATTGTGGCGCGGGATTTCTCCAGCGCACAGGCCACGCTGAG GGGTGCCTGCGACTGGCTCGAAAAAATTGGCAAAACCTGCGCTAAGTTACAAAACCAAATAAAGAGCAACAACATCATTG CCCCCGCGCAGGCGATGCAAGATCACTTAGGCGATCTTATCGCCCAGCTCAATCAAGTGGCCCACTACTGCGATACCCAG ACAAAGCACTTTGCTAATCCTGAAAACCGTCTGCGTTTTGAGCACGGCAAACTGCCTGACTCATTACTCATTCTGGCCGA AAACCTTGCTGTGACCTCTAATCTTGCCCTCAAGCAGTTTAATAAAATGCTGTCGCTGTTGGCAGAGGCGATTAAAGATG GCGACATTCCTAAACATCAATCCGAAGCACTATTGGCCGAAACCGGTTTTATGCTGCAAAGGCTCGAGAATCTGCAAAAA TTGTGGAAGATGATGGCCAAGGAAGATAAACATAAAGGTGCACCTATGGCGCGCTGGGTCGAGCTCATCACAGGTAAACA AGTGGATTATCTGTTTAGCGCCTCGCCTATCGAAGTTGGCTTTATGCTGGAATCCATGCTGTGGCAAAAAGCAGCGGGCG TAGTTTTATGTAGCGCTACGCTGCGCGCACTCAATAACTTCGACCATTTTGTGCATCAAGTCGGTTTATCACTCAACGAT GGCAGCCGTTATTTAGCCTTACAATCGCCCTTCGATTATCCTAATAACGCGACACTTTATTTACCCAAAATGCGCACTGA GCCGACGGATGATGCCTATACGGCAGAACTTGCCGAGCAAATCGTCACCCTGATTGAAGGAGAAATGGCCACCTTAGTGT TATTCGCCTCCTACTGGCAGATGGAAAAAGTGGTTGAATTACTTGAAGGTAAACTCACCACAGAGCTGCTTATTCAAGGC AATGCGCCACGGCAACAGTTGCTCGAAAATCATAAAGCTAAGTGCGATAAAGGCGAACCGAGCATATTGTTTGGCACCGG CAGTTTCTCTGAAGGCCTCGACTTACCCGGCGATTATCTGACGAACTTGATCGTCACTAAACTGCCCTTTGCGGTGCCAA CCTCGCCCGTTGAGCAAGCCCATGCGGAATATGTCAAAGTCAAAGGCGGCAATCCATTCTTGCAACTGACTATCCCAGAT GCTTCACGCAAGCTTATTCAAAGTTGTGGTAGATTACTGCGTAAAGAGCAAGATTATGGCCGAGTCACCATTTTAGATAG GCGGTTAGTTACTAAACGCTATGGCAAGTCCTTGCTGGACGCCTTACCGCCCTTTAGACGTGTCATAGAGTAG
Upstream 100 bases:
>100_bases ATAGCTACTCAATTTAAATGCCGCCAAATGGCAGAAAAGTTTCTTAGGCTATGCAATCACTGTTATTATGTACAGCATTA ATTCGATAAAGTAGTGACGC
Downstream 100 bases:
>100_bases GATTAAAATTTGGAATTGTTACTCGAGCCCAGTCATTGGGCCCTGTTGGCAGTTATAGGTCTTATCGCTGGATTCATCGA TGCCGTTGTTGGCGGCGGTG
Product: ATP-dependent DNA helicase DinG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 690; Mature: 690
Protein sequence:
>690_residues MLPDNVKTQIRAIYKDIATALPHFRPRREQNYMVAEISKTLAGDYDKDRRIIVVEAGTGIGKSLSYILGTIPLALASKKK VCIATATVALQEQLLHKDLPFFLEQSGLNFRFGLVKGRQRYVCLSKLAMLIGDDNSTQMAMWQTKPDNSQVAMMHGLLKD YNEGRWNGEIDTLAVPLPDHLWQQIACDKHSCHRQVASHRNCPFHKAREDVDTWDVLIANHSLLFADLELGGGVILPDPE DVFYVIDEAHHLPIVARDFSSAQATLRGACDWLEKIGKTCAKLQNQIKSNNIIAPAQAMQDHLGDLIAQLNQVAHYCDTQ TKHFANPENRLRFEHGKLPDSLLILAENLAVTSNLALKQFNKMLSLLAEAIKDGDIPKHQSEALLAETGFMLQRLENLQK LWKMMAKEDKHKGAPMARWVELITGKQVDYLFSASPIEVGFMLESMLWQKAAGVVLCSATLRALNNFDHFVHQVGLSLND GSRYLALQSPFDYPNNATLYLPKMRTEPTDDAYTAELAEQIVTLIEGEMATLVLFASYWQMEKVVELLEGKLTTELLIQG NAPRQQLLENHKAKCDKGEPSILFGTGSFSEGLDLPGDYLTNLIVTKLPFAVPTSPVEQAHAEYVKVKGGNPFLQLTIPD ASRKLIQSCGRLLRKEQDYGRVTILDRRLVTKRYGKSLLDALPPFRRVIE
Sequences:
>Translated_690_residues MLPDNVKTQIRAIYKDIATALPHFRPRREQNYMVAEISKTLAGDYDKDRRIIVVEAGTGIGKSLSYILGTIPLALASKKK VCIATATVALQEQLLHKDLPFFLEQSGLNFRFGLVKGRQRYVCLSKLAMLIGDDNSTQMAMWQTKPDNSQVAMMHGLLKD YNEGRWNGEIDTLAVPLPDHLWQQIACDKHSCHRQVASHRNCPFHKAREDVDTWDVLIANHSLLFADLELGGGVILPDPE DVFYVIDEAHHLPIVARDFSSAQATLRGACDWLEKIGKTCAKLQNQIKSNNIIAPAQAMQDHLGDLIAQLNQVAHYCDTQ TKHFANPENRLRFEHGKLPDSLLILAENLAVTSNLALKQFNKMLSLLAEAIKDGDIPKHQSEALLAETGFMLQRLENLQK LWKMMAKEDKHKGAPMARWVELITGKQVDYLFSASPIEVGFMLESMLWQKAAGVVLCSATLRALNNFDHFVHQVGLSLND GSRYLALQSPFDYPNNATLYLPKMRTEPTDDAYTAELAEQIVTLIEGEMATLVLFASYWQMEKVVELLEGKLTTELLIQG NAPRQQLLENHKAKCDKGEPSILFGTGSFSEGLDLPGDYLTNLIVTKLPFAVPTSPVEQAHAEYVKVKGGNPFLQLTIPD ASRKLIQSCGRLLRKEQDYGRVTILDRRLVTKRYGKSLLDALPPFRRVIE >Mature_690_residues MLPDNVKTQIRAIYKDIATALPHFRPRREQNYMVAEISKTLAGDYDKDRRIIVVEAGTGIGKSLSYILGTIPLALASKKK VCIATATVALQEQLLHKDLPFFLEQSGLNFRFGLVKGRQRYVCLSKLAMLIGDDNSTQMAMWQTKPDNSQVAMMHGLLKD YNEGRWNGEIDTLAVPLPDHLWQQIACDKHSCHRQVASHRNCPFHKAREDVDTWDVLIANHSLLFADLELGGGVILPDPE DVFYVIDEAHHLPIVARDFSSAQATLRGACDWLEKIGKTCAKLQNQIKSNNIIAPAQAMQDHLGDLIAQLNQVAHYCDTQ TKHFANPENRLRFEHGKLPDSLLILAENLAVTSNLALKQFNKMLSLLAEAIKDGDIPKHQSEALLAETGFMLQRLENLQK LWKMMAKEDKHKGAPMARWVELITGKQVDYLFSASPIEVGFMLESMLWQKAAGVVLCSATLRALNNFDHFVHQVGLSLND GSRYLALQSPFDYPNNATLYLPKMRTEPTDDAYTAELAEQIVTLIEGEMATLVLFASYWQMEKVVELLEGKLTTELLIQG NAPRQQLLENHKAKCDKGEPSILFGTGSFSEGLDLPGDYLTNLIVTKLPFAVPTSPVEQAHAEYVKVKGGNPFLQLTIPD ASRKLIQSCGRLLRKEQDYGRVTILDRRLVTKRYGKSLLDALPPFRRVIE
Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787018, Length=701, Percent_Identity=34.9500713266762, Blast_Score=365, Evalue=1e-102, Organism=Escherichia coli, GI1788110, Length=685, Percent_Identity=28.3211678832117, Blast_Score=221, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6321019, Length=733, Percent_Identity=21.1459754433834, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010614 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR001650 [H]
Pfam domain/function: PF06733 DEAD_2 [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 77399; Mature: 77399
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPDNVKTQIRAIYKDIATALPHFRPRREQNYMVAEISKTLAGDYDKDRRIIVVEAGTGI CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCC GKSLSYILGTIPLALASKKKVCIATATVALQEQLLHKDLPFFLEQSGLNFRFGLVKGRQR CHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCCCHH YVCLSKLAMLIGDDNSTQMAMWQTKPDNSQVAMMHGLLKDYNEGRWNGEIDTLAVPLPDH HHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCHH LWQQIACDKHSCHRQVASHRNCPFHKAREDVDTWDVLIANHSLLFADLELGGGVILPDPE HHHHHHCCHHHHHHHHHHCCCCCCHHHHCCCCHHHHHEECCCEEEEEEECCCCEECCCCC DVFYVIDEAHHLPIVARDFSSAQATLRGACDWLEKIGKTCAKLQNQIKSNNIIAPAQAMQ CEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH DHLGDLIAQLNQVAHYCDTQTKHFANPENRLRFEHGKLPDSLLILAENLAVTSNLALKQF HHHHHHHHHHHHHHHHHCCCHHHCCCCHHCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH NKMLSLLAEAIKDGDIPKHQSEALLAETGFMLQRLENLQKLWKMMAKEDKHKGAPMARWV HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ELITGKQVDYLFSASPIEVGFMLESMLWQKAAGVVLCSATLRALNNFDHFVHQVGLSLND HHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEECC GSRYLALQSPFDYPNNATLYLPKMRTEPTDDAYTAELAEQIVTLIEGEMATLVLFASYWQ CCEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH MEKVVELLEGKLTTELLIQGNAPRQQLLENHKAKCDKGEPSILFGTGSFSEGLDLPGDYL HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHH TNLIVTKLPFAVPTSPVEQAHAEYVKVKGGNPFLQLTIPDASRKLIQSCGRLLRKEQDYG HHHHHHHCCCCCCCCHHHHHCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCC RVTILDRRLVTKRYGKSLLDALPPFRRVIE CEEEEHHHHHHHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure MLPDNVKTQIRAIYKDIATALPHFRPRREQNYMVAEISKTLAGDYDKDRRIIVVEAGTGI CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCC GKSLSYILGTIPLALASKKKVCIATATVALQEQLLHKDLPFFLEQSGLNFRFGLVKGRQR CHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCCCHH YVCLSKLAMLIGDDNSTQMAMWQTKPDNSQVAMMHGLLKDYNEGRWNGEIDTLAVPLPDH HHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCHH LWQQIACDKHSCHRQVASHRNCPFHKAREDVDTWDVLIANHSLLFADLELGGGVILPDPE HHHHHHCCHHHHHHHHHHCCCCCCHHHHCCCCHHHHHEECCCEEEEEEECCCCEECCCCC DVFYVIDEAHHLPIVARDFSSAQATLRGACDWLEKIGKTCAKLQNQIKSNNIIAPAQAMQ CEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH DHLGDLIAQLNQVAHYCDTQTKHFANPENRLRFEHGKLPDSLLILAENLAVTSNLALKQF HHHHHHHHHHHHHHHHHCCCHHHCCCCHHCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH NKMLSLLAEAIKDGDIPKHQSEALLAETGFMLQRLENLQKLWKMMAKEDKHKGAPMARWV HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ELITGKQVDYLFSASPIEVGFMLESMLWQKAAGVVLCSATLRALNNFDHFVHQVGLSLND HHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEECC GSRYLALQSPFDYPNNATLYLPKMRTEPTDDAYTAELAEQIVTLIEGEMATLVLFASYWQ CCEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH MEKVVELLEGKLTTELLIQGNAPRQQLLENHKAKCDKGEPSILFGTGSFSEGLDLPGDYL HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHH TNLIVTKLPFAVPTSPVEQAHAEYVKVKGGNPFLQLTIPDASRKLIQSCGRLLRKEQDYG HHHHHHHCCCCCCCCHHHHHCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCC RVTILDRRLVTKRYGKSLLDALPPFRRVIE CEEEEHHHHHHHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8396546; 8385320 [H]