| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yfcA [C]
Identifier: 160874768
GI number: 160874768
Start: 1991566
End: 1992339
Strand: Reverse
Name: yfcA [C]
Synonym: Sbal195_1651
Alternate gene names: 160874768
Gene position: 1992339-1991566 (Counterclockwise)
Preceding gene: 160874769
Following gene: 160874767
Centisome position: 37.26
GC content: 49.35
Gene sequence:
>774_bases TTGGAATTGTTACTCGAGCCCAGTCATTGGGCCCTGTTGGCAGTTATAGGTCTTATCGCTGGATTCATCGATGCCGTTGT TGGCGGCGGTGGCCTATTGTCGATCCCCGCACTGTTAACCTTAGGCATAGCACCGCACACCGTATTAGGTACCAATAAGT TAGCCGCCAGTTTTGGCTCTTCAATGGCGGCTTGGACCTATTATCGTCAGCACCTTTTTAAACCCTCGTTTTGGTACATG GCCTTTATTGCCACCTTTATTGGTGCCGTATTGGGCAGTTTCTTAGTCTATTTAGTCGATACCCAATGGCTCGAAAAAGT CCTGCCACTGCTGATCATTGGCATCGCCATTTACAGTTTAATCAGCCCCAATGCGATATCAGATGTTAACTGCCAAGCCC CAACCAGCAAACCACCCGCCAAGCAACAATGGCTACAGGGACTCGCTTTAGGCACTTATGATGGCTTTGCCGGCCCTGGC ATTGGCGCGTTTTGGACTGTCACATCCGGCTCTTTGTATAAACTGCCTTTACTGCACAGTTGCGGCCTCGCCCGTGCAAT GACCTTCACCAGCAACTTGACCGCATTGACTATCTTTGGCTGGCTTGGGCAGGTAGAGTGGCAAATAGGTTTGTGGATGG GATTATGCATGATGTTAGGCTCATTTATCGGCGCCCGCTGCGCGATTAAATTTGGCATGCCCTTTATTCGTCCACTGTTT ATTTTGATCGTGCTAATGATTGCAGCAAATTTGGCATGGAGCGCATGGTTGTGA
Upstream 100 bases:
>100_bases AGTCACCATTTTAGATAGGCGGTTAGTTACTAAACGCTATGGCAAGTCCTTGCTGGACGCCTTACCGCCCTTTAGACGTG TCATAGAGTAGGATTAAAAT
Downstream 100 bases:
>100_bases ACACCCAACAATTACTGGTGATGCTGAAAAATCAGCTCAAAGCCCTAGAGCAAGAAGTACTGCAGCACGATAATCGACTC GCGCCGCCGCAGCGTAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF9 [H]
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MELLLEPSHWALLAVIGLIAGFIDAVVGGGGLLSIPALLTLGIAPHTVLGTNKLAASFGSSMAAWTYYRQHLFKPSFWYM AFIATFIGAVLGSFLVYLVDTQWLEKVLPLLIIGIAIYSLISPNAISDVNCQAPTSKPPAKQQWLQGLALGTYDGFAGPG IGAFWTVTSGSLYKLPLLHSCGLARAMTFTSNLTALTIFGWLGQVEWQIGLWMGLCMMLGSFIGARCAIKFGMPFIRPLF ILIVLMIAANLAWSAWL
Sequences:
>Translated_257_residues MELLLEPSHWALLAVIGLIAGFIDAVVGGGGLLSIPALLTLGIAPHTVLGTNKLAASFGSSMAAWTYYRQHLFKPSFWYM AFIATFIGAVLGSFLVYLVDTQWLEKVLPLLIIGIAIYSLISPNAISDVNCQAPTSKPPAKQQWLQGLALGTYDGFAGPG IGAFWTVTSGSLYKLPLLHSCGLARAMTFTSNLTALTIFGWLGQVEWQIGLWMGLCMMLGSFIGARCAIKFGMPFIRPLF ILIVLMIAANLAWSAWL >Mature_257_residues MELLLEPSHWALLAVIGLIAGFIDAVVGGGGLLSIPALLTLGIAPHTVLGTNKLAASFGSSMAAWTYYRQHLFKPSFWYM AFIATFIGAVLGSFLVYLVDTQWLEKVLPLLIIGIAIYSLISPNAISDVNCQAPTSKPPAKQQWLQGLALGTYDGFAGPG IGAFWTVTSGSLYKLPLLHSCGLARAMTFTSNLTALTIFGWLGQVEWQIGLWMGLCMMLGSFIGARCAIKFGMPFIRPLF ILIVLMIAANLAWSAWL
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
Organism=Escherichia coli, GI1788667, Length=252, Percent_Identity=32.1428571428571, Blast_Score=125, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 27731; Mature: 27731
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLLEPSHWALLAVIGLIAGFIDAVVGGGGLLSIPALLTLGIAPHTVLGTNKLAASFGS CCCEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHCCCHHHHHHHCC SMAAWTYYRQHLFKPSFWYMAFIATFIGAVLGSFLVYLVDTQWLEKVLPLLIIGIAIYSL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISPNAISDVNCQAPTSKPPAKQQWLQGLALGTYDGFAGPGIGAFWTVTSGSLYKLPLLHS HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEECHHHHH CGLARAMTFTSNLTALTIFGWLGQVEWQIGLWMGLCMMLGSFIGARCAIKFGMPFIRPLF CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ILIVLMIAANLAWSAWL HHHHHHHHHHHHHHHCC >Mature Secondary Structure MELLLEPSHWALLAVIGLIAGFIDAVVGGGGLLSIPALLTLGIAPHTVLGTNKLAASFGS CCCEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHCCCHHHHHHHCC SMAAWTYYRQHLFKPSFWYMAFIATFIGAVLGSFLVYLVDTQWLEKVLPLLIIGIAIYSL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISPNAISDVNCQAPTSKPPAKQQWLQGLALGTYDGFAGPGIGAFWTVTSGSLYKLPLLHS HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEECHHHHH CGLARAMTFTSNLTALTIFGWLGQVEWQIGLWMGLCMMLGSFIGARCAIKFGMPFIRPLF CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ILIVLMIAANLAWSAWL HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1655697 [H]