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The map label for this gene is porB [H]

Identifier: 160874520

GI number: 160874520

Start: 1680422

End: 1681366

Strand: Direct

Name: porB [H]

Synonym: Sbal195_1402

Alternate gene names: 160874520

Gene position: 1680422-1681366 (Clockwise)

Preceding gene: 160874518

Following gene: 160874521

Centisome position: 31.43

GC content: 42.12

Gene sequence:

>945_bases
ATGATGAACGTTTTTTGTAAAACTCTACTTGCTTCTGCGCTAGCTTCTGCAACTCTGGCTTCAGCTTATGCCGCTGAGCC
ACTGACTGTTTATGGTAAGTTGAATGTCACTGCTCAATCAAATGATGAGAAAGGTGATGCTACAACAACTATTCAAAGTA
ATGCTTCTCGTTTTGGTGTGAAGGGTAATTTCGAACTGTCTAGCTCGCTGGAAGCCTTCTACACAGTTGAATACGAAGTT
GATACAGGTGCTGCGACTAGCGACAACTTTAAAGCACGTAACCAATTTGTTGGCCTAAAAGGCGCATTCGGTTCGTTCTC
AGTTGGCCGTAACGACACGCTGTTAAAAATCTCTCAAGGTAACGTTGATCAATTTAACGATTTATCTGGCGACTTAAAAA
GCCTGTTCAAAGGCGACAACCGTTTAGGTCAAACTGCGACTTACTTATCTCCATCAATCAGCGGTTTCGTATTCGGTGCT
ACTTATGCTGCTGAAGGTGATGCTGACCAACAAGGTCAAGACGGTTTCAGCTTAGCCGCTATGTACGGTGACGCTAAACT
GAAAAAATCACCTATCTATGCTGCTATTGCTTATGACTCAGATGTAAAAGGTTATGAAATCCTACGTGCATCGGTTCAAG
GTAAAATCGCTAATTTAACCTTAGGTGGTATGTACCAACAACAGGAAGAGACGTATAAAAATGCTCTACCTGTAACGACT
GATAGTGTTAACGGTTACCTGTTCAGCGCTGCCTATGATATCGATGCTGTTACTTTGAAAGCACAATATCAAGATATGGA
AGACAAAGGTGATTCATGGTCAGTAGGTGCTGATTATGCACTGGCTAAACCGACTAAAGTCTTCGCTTTCTACACCAATC
GTTCGTTAGAAGCGTCTGCTGATGATGACAAATACATCGGTGTTGGATTGGAACACAAATTCTAA

Upstream 100 bases:

>100_bases
CTAAATAGTCACAATTGAAATAAAACTGAAACACATTCATTGCACACTTTCGGTCGTTCCAAACCAATAACCAAGACGAA
CATAACGTCGAAAGGATTAA

Downstream 100 bases:

>100_bases
ATCCAGTATTAAGATTCAATTAAGGAGGCATATTGCCTCCTTTTTTATTGCTATAAACAAACAGTTATATAAACTTATTA
TGACAAATATTACTACTATA

Product: porin

Products: NA

Alternate protein names: PIB; Protein IB; Class 3 protein; Porin [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MMNVFCKTLLASALASATLASAYAAEPLTVYGKLNVTAQSNDEKGDATTTIQSNASRFGVKGNFELSSSLEAFYTVEYEV
DTGAATSDNFKARNQFVGLKGAFGSFSVGRNDTLLKISQGNVDQFNDLSGDLKSLFKGDNRLGQTATYLSPSISGFVFGA
TYAAEGDADQQGQDGFSLAAMYGDAKLKKSPIYAAIAYDSDVKGYEILRASVQGKIANLTLGGMYQQQEETYKNALPVTT
DSVNGYLFSAAYDIDAVTLKAQYQDMEDKGDSWSVGADYALAKPTKVFAFYTNRSLEASADDDKYIGVGLEHKF

Sequences:

>Translated_314_residues
MMNVFCKTLLASALASATLASAYAAEPLTVYGKLNVTAQSNDEKGDATTTIQSNASRFGVKGNFELSSSLEAFYTVEYEV
DTGAATSDNFKARNQFVGLKGAFGSFSVGRNDTLLKISQGNVDQFNDLSGDLKSLFKGDNRLGQTATYLSPSISGFVFGA
TYAAEGDADQQGQDGFSLAAMYGDAKLKKSPIYAAIAYDSDVKGYEILRASVQGKIANLTLGGMYQQQEETYKNALPVTT
DSVNGYLFSAAYDIDAVTLKAQYQDMEDKGDSWSVGADYALAKPTKVFAFYTNRSLEASADDDKYIGVGLEHKF
>Mature_314_residues
MMNVFCKTLLASALASATLASAYAAEPLTVYGKLNVTAQSNDEKGDATTTIQSNASRFGVKGNFELSSSLEAFYTVEYEV
DTGAATSDNFKARNQFVGLKGAFGSFSVGRNDTLLKISQGNVDQFNDLSGDLKSLFKGDNRLGQTATYLSPSISGFVFGA
TYAAEGDADQQGQDGFSLAAMYGDAKLKKSPIYAAIAYDSDVKGYEILRASVQGKIANLTLGGMYQQQEETYKNALPVTT
DSVNGYLFSAAYDIDAVTLKAQYQDMEDKGDSWSVGADYALAKPTKVFAFYTNRSLEASADDDKYIGVGLEHKF

Specific function: Serves as a slightly cation selective porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Gram-negative porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013793
- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 33704; Mature: 33704

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNVFCKTLLASALASATLASAYAAEPLTVYGKLNVTAQSNDEKGDATTTIQSNASRFGV
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCC
KGNFELSSSLEAFYTVEYEVDTGAATSDNFKARNQFVGLKGAFGSFSVGRNDTLLKISQG
CCCCEECCCCEEEEEEEEEECCCCCCCCCCHHHHHEEEEEECCCCCCCCCCCCEEEEECC
NVDQFNDLSGDLKSLFKGDNRLGQTATYLSPSISGFVFGATYAAEGDADQQGQDGFSLAA
CCCCHHCCCHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCEEEEE
MYGDAKLKKSPIYAAIAYDSDVKGYEILRASVQGKIANLTLGGMYQQQEETYKNALPVTT
EECCCEECCCCEEEEEEECCCCCHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCCCEE
DSVNGYLFSAAYDIDAVTLKAQYQDMEDKGDSWSVGADYALAKPTKVFAFYTNRSLEASA
CCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCEECCC
DDDKYIGVGLEHKF
CCCCEEEEECCCCC
>Mature Secondary Structure
MMNVFCKTLLASALASATLASAYAAEPLTVYGKLNVTAQSNDEKGDATTTIQSNASRFGV
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCC
KGNFELSSSLEAFYTVEYEVDTGAATSDNFKARNQFVGLKGAFGSFSVGRNDTLLKISQG
CCCCEECCCCEEEEEEEEEECCCCCCCCCCHHHHHEEEEEECCCCCCCCCCCCEEEEECC
NVDQFNDLSGDLKSLFKGDNRLGQTATYLSPSISGFVFGATYAAEGDADQQGQDGFSLAA
CCCCHHCCCHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCEEEEE
MYGDAKLKKSPIYAAIAYDSDVKGYEILRASVQGKIANLTLGGMYQQQEETYKNALPVTT
EECCCEECCCCEEEEEEECCCCCHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCCCEE
DSVNGYLFSAAYDIDAVTLKAQYQDMEDKGDSWSVGADYALAKPTKVFAFYTNRSLEASA
CCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCEECCC
DDDKYIGVGLEHKF
CCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1330818; 10710307 [H]