| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874518
Identifier: 160874518
GI number: 160874518
Start: 1677221
End: 1679038
Strand: Direct
Name: 160874518
Synonym: Sbal195_1400
Alternate gene names: NA
Gene position: 1677221-1679038 (Clockwise)
Preceding gene: 160874512
Following gene: 160874520
Centisome position: 31.37
GC content: 46.64
Gene sequence:
>1818_bases GTGAAACCCAACAGATTATCAATCTTGATATTAAGTGCATTATTTTCGGGCCAAGTATTAGCCGAGGTGAAATATCAAAT CGACCTCGTTAAACCCGAGCATCATATCGCCCAAGTGAGTGTGACTTTTCCTGAAGTGAATACCAGCGATTTTACGGTCA ATCTGCCAGTGTGGCGCACGGGTAAATATCAAGTATTGCCTTTGGCTGACGGTGTGCGTTTATTTAGCGCTAAAGACAAT CAAGGTCATGAACTCCCATGGAAACGTACGGCGAGCGGTGAATGGCAAGTCGCGCTCACGCAGCCAACCAGCGTGACGGT TAGTTATCAGTTGTATGCTAATGAATTAGGCCAAAGGGTTCGCCATATTGATGCGAGCCACGCGTATTTAGATGCCAGCG GCGTGTTCATGTATAGCCCGCAATTTCGCTCTGAGCCTGTATCGGTTCAATTGAACGTTCCTGAAACGTGGCAAAGTTAC TCCGGTATGGCTTCTGGCACGCCAGCGCATTCTTTTATCGCACAAAATTACGATGTGTTAATTGATTCCCCTATCGAAAC CGGTGTGAGTACTCATAAGCAATTTAGTGCTAATGGCAAAAACTATGAGTTAGTATTTTGGGGTGAAGGTAACTATGACG CCGATAAAGTCGTTAAGGATTTAACGGCATTAAGTGGTCAAGCAAAGGCGATTTGGGATGATTATCCTTTTGATCGTTAT GTGTATATGGTGCATGCCACCAGCGGCGCCAGTGGCGCGACAGAACATTTAAATTCTACGGTTATCCAACTGCCGCGTTT TAGTTTCCGTGAGCGCAAGGATTACCTACGCTTTATTAGCACAGCATCCCATGAGTTTATCCATACCTGGAACGTAAAGG CCTATCGTCCTGCGGGACTTGTGCCCTATGATTATCAGCATGAAAACATGACGGAATTACTGTGGATGGCCGAAGGCTCT ACCAGTTATTTCCAAGGTCAGTTACTGCTGCGTGCTGGGGTGATGACGCCTAAAGAGTTCCTCGAAGACTTAGCTAAACG CGTTGAGAAAAACCAACTCAACCCTGGGCGTGAAACTCAATCTGTTGCCGAGGCGAGTGCAGGAGAGTGGAGCAGTATGG GCGGTGATTATGCGATTAATCACAGTGTGAATATCTATTCTGAGGGTTACTTAACCTCCTTAGCGTTAGATTTCTCGCTG CTGCAAGATACTAAGCTAAAGCATTCATACCGCGATGTGCATCGCCGTTTATATCAAGATCACCGTGTGCCAAAGGGCTA TGGGGTTAGTGATGTGCAGCATATCCTTAAGGATTTATCCGGCAAAGATTATGCGCCTTGGTGGCAGGCAAACGTGAATA GCCCGATGAGCTTAGATTTCCCTGCACTGTTATCGCAGGCTGGGTTAGCAATGTCCTATGGCAAAGATTCAAAAGTCGAG GCATTTGCCGGCATGACGTTAAGCAGCGCCCATGGCTCTTTAGTGTTAGACCAAGTGCTGCGTAATGGCCCTGCGTGGCA AGCGGGTATCGTCGCGGGGGATGAAGTATTAGCGATTAATGGTCTTAAGGTGACGGCAGCGGGTTTTGATAAGCGCATTA ATGACTTTAAGACTGGCGATAGCATTGAAGTGACACTATTCAGCAATGATAAAATCAAGCAAGTTAAGCTCATCCTTGGG GAGCAGCAAAGCGGTAAGTTAGTGCTTAAGGGCGATGCGAAAGCGACTAAACAGCAAAAAGCCTTCTTCAAGGCTTGGTT AGGCATTGATTGGCCGTTCGATAATAAAGGCGAGCTAGTGTCTAAAGCCAATGACTAA
Upstream 100 bases:
>100_bases ACTTATTTTGTTAGCTTTTGTTAGCGCCTAATGAGGATGCTACATCGACTTGTTATACTTGGAAAAATCATAAGAAGCAT AATAACAGAAGGAAGCAAGA
Downstream 100 bases:
>100_bases ATCAAATGGCATTCGGCTTGTGATTAAGCCGAATGCGTTAACTTTAGACGCTTAATTGTCATAAAAAAGGCGCACTCTCA TTTAGACGGTGCGCCTTTTG
Product: peptidase M61 domain-containing protein
Products: NA
Alternate protein names: Peptidase M; Protease; Glycyl Aminopeptidase; M61 Family Peptidase; M61 Glycyl Aminopeptidase; Pdz/Dhr/Glgf; M61 Family Glycyl Aminopeptidase; Trypsin-Like Serine Protease; Aminopeptidase N Family Protein; Metallopeptidase; PDZ Domain-Containing Protein; PDZ Domain Family Protein; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Protease With C-Terminal PDZ Domain; Glycyl Aminopeptidase Protein; Aminopeptidase; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MKPNRLSILILSALFSGQVLAEVKYQIDLVKPEHHIAQVSVTFPEVNTSDFTVNLPVWRTGKYQVLPLADGVRLFSAKDN QGHELPWKRTASGEWQVALTQPTSVTVSYQLYANELGQRVRHIDASHAYLDASGVFMYSPQFRSEPVSVQLNVPETWQSY SGMASGTPAHSFIAQNYDVLIDSPIETGVSTHKQFSANGKNYELVFWGEGNYDADKVVKDLTALSGQAKAIWDDYPFDRY VYMVHATSGASGATEHLNSTVIQLPRFSFRERKDYLRFISTASHEFIHTWNVKAYRPAGLVPYDYQHENMTELLWMAEGS TSYFQGQLLLRAGVMTPKEFLEDLAKRVEKNQLNPGRETQSVAEASAGEWSSMGGDYAINHSVNIYSEGYLTSLALDFSL LQDTKLKHSYRDVHRRLYQDHRVPKGYGVSDVQHILKDLSGKDYAPWWQANVNSPMSLDFPALLSQAGLAMSYGKDSKVE AFAGMTLSSAHGSLVLDQVLRNGPAWQAGIVAGDEVLAINGLKVTAAGFDKRINDFKTGDSIEVTLFSNDKIKQVKLILG EQQSGKLVLKGDAKATKQQKAFFKAWLGIDWPFDNKGELVSKAND
Sequences:
>Translated_605_residues MKPNRLSILILSALFSGQVLAEVKYQIDLVKPEHHIAQVSVTFPEVNTSDFTVNLPVWRTGKYQVLPLADGVRLFSAKDN QGHELPWKRTASGEWQVALTQPTSVTVSYQLYANELGQRVRHIDASHAYLDASGVFMYSPQFRSEPVSVQLNVPETWQSY SGMASGTPAHSFIAQNYDVLIDSPIETGVSTHKQFSANGKNYELVFWGEGNYDADKVVKDLTALSGQAKAIWDDYPFDRY VYMVHATSGASGATEHLNSTVIQLPRFSFRERKDYLRFISTASHEFIHTWNVKAYRPAGLVPYDYQHENMTELLWMAEGS TSYFQGQLLLRAGVMTPKEFLEDLAKRVEKNQLNPGRETQSVAEASAGEWSSMGGDYAINHSVNIYSEGYLTSLALDFSL LQDTKLKHSYRDVHRRLYQDHRVPKGYGVSDVQHILKDLSGKDYAPWWQANVNSPMSLDFPALLSQAGLAMSYGKDSKVE AFAGMTLSSAHGSLVLDQVLRNGPAWQAGIVAGDEVLAINGLKVTAAGFDKRINDFKTGDSIEVTLFSNDKIKQVKLILG EQQSGKLVLKGDAKATKQQKAFFKAWLGIDWPFDNKGELVSKAND >Mature_605_residues MKPNRLSILILSALFSGQVLAEVKYQIDLVKPEHHIAQVSVTFPEVNTSDFTVNLPVWRTGKYQVLPLADGVRLFSAKDN QGHELPWKRTASGEWQVALTQPTSVTVSYQLYANELGQRVRHIDASHAYLDASGVFMYSPQFRSEPVSVQLNVPETWQSY SGMASGTPAHSFIAQNYDVLIDSPIETGVSTHKQFSANGKNYELVFWGEGNYDADKVVKDLTALSGQAKAIWDDYPFDRY VYMVHATSGASGATEHLNSTVIQLPRFSFRERKDYLRFISTASHEFIHTWNVKAYRPAGLVPYDYQHENMTELLWMAEGS TSYFQGQLLLRAGVMTPKEFLEDLAKRVEKNQLNPGRETQSVAEASAGEWSSMGGDYAINHSVNIYSEGYLTSLALDFSL LQDTKLKHSYRDVHRRLYQDHRVPKGYGVSDVQHILKDLSGKDYAPWWQANVNSPMSLDFPALLSQAGLAMSYGKDSKVE AFAGMTLSSAHGSLVLDQVLRNGPAWQAGIVAGDEVLAINGLKVTAAGFDKRINDFKTGDSIEVTLFSNDKIKQVKLILG EQQSGKLVLKGDAKATKQQKAFFKAWLGIDWPFDNKGELVSKAND
Specific function: Unknown
COG id: COG3975
COG function: function code R; Predicted protease with the C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67461; Mature: 67461
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPNRLSILILSALFSGQVLAEVKYQIDLVKPEHHIAQVSVTFPEVNTSDFTVNLPVWRT CCCCEEEEEEEEHHHCCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCEEEECCEEEC GKYQVLPLADGVRLFSAKDNQGHELPWKRTASGEWQVALTQPTSVTVSYQLYANELGQRV CCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEHHHHHHHHH RHIDASHAYLDASGVFMYSPQFRSEPVSVQLNVPETWQSYSGMASGTPAHSFIAQNYDVL HHCCCCCEEEECCCEEEECCCCCCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHCCCCEE IDSPIETGVSTHKQFSANGKNYELVFWGEGNYDADKVVKDLTALSGQAKAIWDDYPFDRY EECCHHHCCHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCEE VYMVHATSGASGATEHLNSTVIQLPRFSFRERKDYLRFISTASHEFIHTWNVKAYRPAGL EEEEEECCCCCCCHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCC VPYDYQHENMTELLWMAEGSTSYFQGQLLLRAGVMTPKEFLEDLAKRVEKNQLNPGRETQ CCCCCCCCCCEEEEEEECCCCCHHHCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHH SVAEASAGEWSSMGGDYAINHSVNIYSEGYLTSLALDFSLLQDTKLKHSYRDVHRRLYQD HHHHHCCCCHHHCCCCEEEECEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH HRVPKGYGVSDVQHILKDLSGKDYAPWWQANVNSPMSLDFPALLSQAGLAMSYGKDSKVE CCCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHHHHHCCCEEECCCCCCEE AFAGMTLSSAHGSLVLDQVLRNGPAWQAGIVAGDEVLAINGLKVTAAGFDKRINDFKTGD HEECCEEECCCCHHHHHHHHHCCCCCEEEEEECCCEEEEECEEEEECCCHHHHHCCCCCC SIEVTLFSNDKIKQVKLILGEQQSGKLVLKGDAKATKQQKAFFKAWLGIDWPFDNKGELV EEEEEEECCCCEEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCC SKAND CCCCC >Mature Secondary Structure MKPNRLSILILSALFSGQVLAEVKYQIDLVKPEHHIAQVSVTFPEVNTSDFTVNLPVWRT CCCCEEEEEEEEHHHCCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCEEEECCEEEC GKYQVLPLADGVRLFSAKDNQGHELPWKRTASGEWQVALTQPTSVTVSYQLYANELGQRV CCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEHHHHHHHHH RHIDASHAYLDASGVFMYSPQFRSEPVSVQLNVPETWQSYSGMASGTPAHSFIAQNYDVL HHCCCCCEEEECCCEEEECCCCCCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHCCCCEE IDSPIETGVSTHKQFSANGKNYELVFWGEGNYDADKVVKDLTALSGQAKAIWDDYPFDRY EECCHHHCCHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCEE VYMVHATSGASGATEHLNSTVIQLPRFSFRERKDYLRFISTASHEFIHTWNVKAYRPAGL EEEEEECCCCCCCHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCC VPYDYQHENMTELLWMAEGSTSYFQGQLLLRAGVMTPKEFLEDLAKRVEKNQLNPGRETQ CCCCCCCCCCEEEEEEECCCCCHHHCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHH SVAEASAGEWSSMGGDYAINHSVNIYSEGYLTSLALDFSLLQDTKLKHSYRDVHRRLYQD HHHHHCCCCHHHCCCCEEEECEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH HRVPKGYGVSDVQHILKDLSGKDYAPWWQANVNSPMSLDFPALLSQAGLAMSYGKDSKVE CCCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHHHHHCCCEEECCCCCCEE AFAGMTLSSAHGSLVLDQVLRNGPAWQAGIVAGDEVLAINGLKVTAAGFDKRINDFKTGD HEECCEEECCCCHHHHHHHHHCCCCCEEEEEECCCEEEEECEEEEECCCHHHHHCCCCCC SIEVTLFSNDKIKQVKLILGEQQSGKLVLKGDAKATKQQKAFFKAWLGIDWPFDNKGELV EEEEEEECCCCEEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCC SKAND CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA