| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874427
Identifier: 160874427
GI number: 160874427
Start: 1549237
End: 1550094
Strand: Direct
Name: 160874427
Synonym: Sbal195_1308
Alternate gene names: NA
Gene position: 1549237-1550094 (Clockwise)
Preceding gene: 160874426
Following gene: 160874428
Centisome position: 28.97
GC content: 44.29
Gene sequence:
>858_bases ATGTCATTGTTTAAATACGTTTCTGTCTTATTGCTGCTTTTTTTAGCCTTGCCCGCCAAAAGTGCGTTGCAGGTTAATAG TCCTTTACCCTGTCATAAAACCATTAAAGTCGGTTATAACGACTGGCCTCCCTATGCTTGGCAAGATCCCCAAGGAGAAG CTCAAGGTTTAGATGTGGATCTGATGCGGGCATTTGCCGTGTATCTCGGCTGCGAAATCAATTTTATCAATGTGCCCGCG AAGCGATCGCATCAGATGCTGAAAGCTGGACAGTTAGATGTGTTGATGGGAGCGACAATGACGGATGAACGTCAGGCTTA TGCGCATTTTTCCAGTTATTATCGAGACGAAGAACTGCGCTTATTCGTGCTCGATGAGCAAAAAGATCAGATCAATGTCG ATAAGTGGGAGGACATTTTTACCAAAAAGTTACGCCTGCTTGTGCCTTCAAGCGGTTGGTATGGCGCCGATTATCAAGAG TCTCAATATCGATTAGAGCAGGAGCATTTATTGGTATTGAGCCCTGACTCAGATAAGTCGGTACAAATGCTCACCTATGG TCGAGGGGATATGATCGTCGGCGATACTATGGCAATGCCCTATATTGCCAGTCAGCATCAACATATTAAGCTAGTGCCAC TCAAATTAGTGTTAGATCAAAACCATATCCATTTAATGCTCAGTAAAGCGAGTATGACGCCAAGCCAGTTAGAGCAGTTT AATCATGCGATTAAGGCCTTAATGGATAACGGTGAAATTGCACGCGTGATCAATAAATGGCAACAAATGTCACTGGCGAA ACAATCCAACATGAGTCGCCTAAATAGTCCGCTAAAGACGCTGTACGTCAGCCCGTAA
Upstream 100 bases:
>100_bases TATTTAGGTATTAAAACACCGCGGAAGCCTGACGTTGAACCGTTTTGCTTCATCTTCATCAGGAGAGGATCGCCAACTTA AGGGGCAAGTAACTTAGCCT
Downstream 100 bases:
>100_bases TCAGTCCTTAACGTTAGCCCTTAACATTAGTTCTTAATATTAGTTCTTAATATTAGTCCTAAACACAAGCCCTTCACGTT AGCTAATCCTGTCTTACTCC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSLFKYVSVLLLLFLALPAKSALQVNSPLPCHKTIKVGYNDWPPYAWQDPQGEAQGLDVDLMRAFAVYLGCEINFINVPA KRSHQMLKAGQLDVLMGATMTDERQAYAHFSSYYRDEELRLFVLDEQKDQINVDKWEDIFTKKLRLLVPSSGWYGADYQE SQYRLEQEHLLVLSPDSDKSVQMLTYGRGDMIVGDTMAMPYIASQHQHIKLVPLKLVLDQNHIHLMLSKASMTPSQLEQF NHAIKALMDNGEIARVINKWQQMSLAKQSNMSRLNSPLKTLYVSP
Sequences:
>Translated_285_residues MSLFKYVSVLLLLFLALPAKSALQVNSPLPCHKTIKVGYNDWPPYAWQDPQGEAQGLDVDLMRAFAVYLGCEINFINVPA KRSHQMLKAGQLDVLMGATMTDERQAYAHFSSYYRDEELRLFVLDEQKDQINVDKWEDIFTKKLRLLVPSSGWYGADYQE SQYRLEQEHLLVLSPDSDKSVQMLTYGRGDMIVGDTMAMPYIASQHQHIKLVPLKLVLDQNHIHLMLSKASMTPSQLEQF NHAIKALMDNGEIARVINKWQQMSLAKQSNMSRLNSPLKTLYVSP >Mature_284_residues SLFKYVSVLLLLFLALPAKSALQVNSPLPCHKTIKVGYNDWPPYAWQDPQGEAQGLDVDLMRAFAVYLGCEINFINVPAK RSHQMLKAGQLDVLMGATMTDERQAYAHFSSYYRDEELRLFVLDEQKDQINVDKWEDIFTKKLRLLVPSSGWYGADYQES QYRLEQEHLLVLSPDSDKSVQMLTYGRGDMIVGDTMAMPYIASQHQHIKLVPLKLVLDQNHIHLMLSKASMTPSQLEQFN HAIKALMDNGEIARVINKWQQMSLAKQSNMSRLNSPLKTLYVSP
Specific function: Unknown
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32594; Mature: 32463
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFKYVSVLLLLFLALPAKSALQVNSPLPCHKTIKVGYNDWPPYAWQDPQGEAQGLDVD CCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHH LMRAFAVYLGCEINFINVPAKRSHQMLKAGQLDVLMGATMTDERQAYAHFSSYYRDEELR HHHHHHHHHCCEEEEEECCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEE LFVLDEQKDQINVDKWEDIFTKKLRLLVPSSGWYGADYQESQYRLEQEHLLVLSPDSDKS EEEEECCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCCCCEEEECCCCCCC VQMLTYGRGDMIVGDTMAMPYIASQHQHIKLVPLKLVLDQNHIHLMLSKASMTPSQLEQF EEEEEECCCCEEECCCHHCCHHHCCCCEEEEEEEEEEECCCCEEEEEEECCCCHHHHHHH NHAIKALMDNGEIARVINKWQQMSLAKQSNMSRLNSPLKTLYVSP HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECC >Mature Secondary Structure SLFKYVSVLLLLFLALPAKSALQVNSPLPCHKTIKVGYNDWPPYAWQDPQGEAQGLDVD CHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHH LMRAFAVYLGCEINFINVPAKRSHQMLKAGQLDVLMGATMTDERQAYAHFSSYYRDEELR HHHHHHHHHCCEEEEEECCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEE LFVLDEQKDQINVDKWEDIFTKKLRLLVPSSGWYGADYQESQYRLEQEHLLVLSPDSDKS EEEEECCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCCCCEEEECCCCCCC VQMLTYGRGDMIVGDTMAMPYIASQHQHIKLVPLKLVLDQNHIHLMLSKASMTPSQLEQF EEEEEECCCCEEECCCHHCCHHHCCCCEEEEEEEEEEECCCCEEEEEEECCCCHHHHHHH NHAIKALMDNGEIARVINKWQQMSLAKQSNMSRLNSPLKTLYVSP HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA