| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874426
Identifier: 160874426
GI number: 160874426
Start: 1548654
End: 1548947
Strand: Direct
Name: 160874426
Synonym: Sbal195_1307
Alternate gene names: NA
Gene position: 1548654-1548947 (Clockwise)
Preceding gene: 160874425
Following gene: 160874427
Centisome position: 28.96
GC content: 45.58
Gene sequence:
>294_bases TTGTCTAGATTTTTTCTATTAAGTGTCTGTTTTTGCGTCTTAGCCTCAGGGTGTGCAACCGATCAACGTGAGTTATATCG GCGCATAAATGTAGCCTACGATTTTGAAGTGACCCATTGCGACAGTTTCGCCATCGTCACTGGGGTGAGTCGCCGCGAGA ATAATCTAGATGAAGCTAAAGAGTCTGCCATTGCTCAGGGAGAGCAATTGGGCGGCACGCACATCGTTTGGTTACAGACT GATATGGGCGATCCCACTAAGGTTGTTGCTGTTATTTATAAGTGTCAGATTTAG
Upstream 100 bases:
>100_bases ATTGTATTGTCTTTGGTAATAAAAATGTGATCAAGTTCACAATTTTATTGGTTTTAATTGTTTATGTTCACCCGCGTGTT TACTCAGTGGGTTGATTGAT
Downstream 100 bases:
>100_bases TTAGCTTAACCTTCAACTTGATTTCAGTTACTCAGGCGAAGTCTTTATGGCAAGTGCATTAAGTCGGCTACACTAAACGC GTTAAACTAGCTACTGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MSRFFLLSVCFCVLASGCATDQRELYRRINVAYDFEVTHCDSFAIVTGVSRRENNLDEAKESAIAQGEQLGGTHIVWLQT DMGDPTKVVAVIYKCQI
Sequences:
>Translated_97_residues MSRFFLLSVCFCVLASGCATDQRELYRRINVAYDFEVTHCDSFAIVTGVSRRENNLDEAKESAIAQGEQLGGTHIVWLQT DMGDPTKVVAVIYKCQI >Mature_96_residues SRFFLLSVCFCVLASGCATDQRELYRRINVAYDFEVTHCDSFAIVTGVSRRENNLDEAKESAIAQGEQLGGTHIVWLQTD MGDPTKVVAVIYKCQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10851; Mature: 10720
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFFLLSVCFCVLASGCATDQRELYRRINVAYDFEVTHCDSFAIVTGVSRRENNLDEAK CCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEECCCCEEEEECCCCCCCCHHHHH ESAIAQGEQLGGTHIVWLQTDMGDPTKVVAVIYKCQI HHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEEECC >Mature Secondary Structure SRFFLLSVCFCVLASGCATDQRELYRRINVAYDFEVTHCDSFAIVTGVSRRENNLDEAK CHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEECCCCEEEEECCCCCCCCHHHHH ESAIAQGEQLGGTHIVWLQTDMGDPTKVVAVIYKCQI HHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA