| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874313
Identifier: 160874313
GI number: 160874313
Start: 1416156
End: 1416668
Strand: Direct
Name: 160874313
Synonym: Sbal195_1193
Alternate gene names: NA
Gene position: 1416156-1416668 (Clockwise)
Preceding gene: 160874312
Following gene: 160874315
Centisome position: 26.48
GC content: 47.37
Gene sequence:
>513_bases TTGATTGGCAGATTGATTGATAAGTTGGTTTTTGGGTTGATTCTTGTGATTGCCTTGCAGTTGCCGCAACTGGCTGATCA TTATCAGCAATTTCTCGCTGGACTCTATGCATCGACCCAATGGCAGGTAGAAGGCTACGAGGCAACGGCTAAGGAATATC ATTATGCCGATGCTGAGGCCATGATTGCTCGTCACCAGCAAAATGAAGAGCCTAGCGTGCGTGCCGACGCCGAGCAAAAG GTGCAGACAATCGCGCTTTATAAAGAGTTAACACAGGGCATGGCGATGTTTAACACGGGTAATTTGTTTGAGAAAACTGC CTATATGTTTAACCCCGTTCGCTTTGATTATCTTGAGAAGACCGTCAGTAACTTTAAGCCTGGGATACCTTTGACCACCA GTGGTATTGGCTTTGGCGTTGTGGTGGCGTTGGTCGTGCATTATCTCGGGTCTATCCCTTTTATCCTGTGGGCAAGGCGT AGAAAGCGCCAGAGATTAGCGAGAGCAAATTAG
Upstream 100 bases:
>100_bases AATTGGGTAGTTATTGATTGAGTCAGTACAGTTTTGAGCATTATGTCATTACGGTGTCGTAACCGCGGCGTTGTTTGGCT ACATCACCAAGGAGGATCCC
Downstream 100 bases:
>100_bases CTTTTAAAAGTTGTTATGCTTGTTAGACCGAGGTTATCTCTTAGGCGAGGCTTAGCGTTGTTGCAGCCTTAATCGTAAAG AATGACTTGCAGTTGAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MIGRLIDKLVFGLILVIALQLPQLADHYQQFLAGLYASTQWQVEGYEATAKEYHYADAEAMIARHQQNEEPSVRADAEQK VQTIALYKELTQGMAMFNTGNLFEKTAYMFNPVRFDYLEKTVSNFKPGIPLTTSGIGFGVVVALVVHYLGSIPFILWARR RKRQRLARAN
Sequences:
>Translated_170_residues MIGRLIDKLVFGLILVIALQLPQLADHYQQFLAGLYASTQWQVEGYEATAKEYHYADAEAMIARHQQNEEPSVRADAEQK VQTIALYKELTQGMAMFNTGNLFEKTAYMFNPVRFDYLEKTVSNFKPGIPLTTSGIGFGVVVALVVHYLGSIPFILWARR RKRQRLARAN >Mature_170_residues MIGRLIDKLVFGLILVIALQLPQLADHYQQFLAGLYASTQWQVEGYEATAKEYHYADAEAMIARHQQNEEPSVRADAEQK VQTIALYKELTQGMAMFNTGNLFEKTAYMFNPVRFDYLEKTVSNFKPGIPLTTSGIGFGVVVALVVHYLGSIPFILWARR RKRQRLARAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19329; Mature: 19329
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGRLIDKLVFGLILVIALQLPQLADHYQQFLAGLYASTQWQVEGYEATAKEYHYADAEA CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHH MIARHQQNEEPSVRADAEQKVQTIALYKELTQGMAMFNTGNLFEKTAYMFNPVRFDYLEK HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH TVSNFKPGIPLTTSGIGFGVVVALVVHYLGSIPFILWARRRKRQRLARAN HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIGRLIDKLVFGLILVIALQLPQLADHYQQFLAGLYASTQWQVEGYEATAKEYHYADAEA CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHH MIARHQQNEEPSVRADAEQKVQTIALYKELTQGMAMFNTGNLFEKTAYMFNPVRFDYLEK HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH TVSNFKPGIPLTTSGIGFGVVVALVVHYLGSIPFILWARRRKRQRLARAN HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA