| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is sseA [H]
Identifier: 160874312
GI number: 160874312
Start: 1415200
End: 1416057
Strand: Direct
Name: sseA [H]
Synonym: Sbal195_1192
Alternate gene names: 160874312
Gene position: 1415200-1416057 (Clockwise)
Preceding gene: 160874311
Following gene: 160874313
Centisome position: 26.47
GC content: 49.88
Gene sequence:
>858_bases ATGGAATACCCACTAGTAAGTACGCAGTGGCTCGAAGCACACCTCACCGATCCCCATTTAGTCTTGCTCGATGCCAGTAT GGAAACCGTTATTGGTAAAGAGCCCCTAGTTTACGATGAGCCTATTTGCATTCCGCGCTCACGTCGATTCGACTTGGAAA ATGTGTTTTGCGATAAGACTTCAACTCAAATCCATGCCTTGCCGACGTTTGAACAATTCAGCCAAGGGATAGCGCAACTT GGGATTGAGGCCGACAGTGTTATCGTTATCTATGATAACCAAGGCATTTATTCATCTCCACGGGCGTGGTGGACCTTTAA AGTCATGGGTTTTAATCGAGTCTATGTACTCGATGGTGGCTTGCCTCAGTGGATTGAAGAAGACCGCATCACCTCATCGC GTTATCAAGCCGAAGGCGTCGATTACGGCCCGACGGATATCGATACATTAGCTGATGTGCTGCAATACCACCCCGAGCGG GTGATGGATGCCGAGGCCGTGTTATCACGTATTGAAGATGCCGAAACCGCGATTGTCGATGCCCGTGGTGCGCCACGCTT TTTAGGTCAAGTGAGTGAGCCGCGCCCCGGTGTGCGCTCAGGGCATATTCCTCGTTCTGTTAACTTACCCTTCGCTCAAG TGCTCGATGGCAATAAAATCAAAACGACCAGTGAGTTACAGGTTATTTATCAAGGATTAGCAGCGGACAAGTCCGCACGG ATATTTAGCTGTGGCTCTGGGATTACGGCGTGTATTTTGATCTTGGCTTCAGTTGCGGCAGGGCATACAAATCCCATCCT CTATGATGGCTCGTGGGCGGATTGGGGCAGTCGTACCGATTTGCCAATTGAGTGCTAA
Upstream 100 bases:
>100_bases TAAAATCCCAAAGCAGACAATTTGTTAAGCCGATATTTGGGCTTTACGGCATTTGGTGAGAGACTAGCGGCAGACTTGGA TAACAGTAAAAGGACCCGCT
Downstream 100 bases:
>100_bases TTGGGTAGTTATTGATTGAGTCAGTACAGTTTTGAGCATTATGTCATTACGGTGTCGTAACCGCGGCGTTGTTTGGCTAC ATCACCAAGGAGGATCCCTT
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MEYPLVSTQWLEAHLTDPHLVLLDASMETVIGKEPLVYDEPICIPRSRRFDLENVFCDKTSTQIHALPTFEQFSQGIAQL GIEADSVIVIYDNQGIYSSPRAWWTFKVMGFNRVYVLDGGLPQWIEEDRITSSRYQAEGVDYGPTDIDTLADVLQYHPER VMDAEAVLSRIEDAETAIVDARGAPRFLGQVSEPRPGVRSGHIPRSVNLPFAQVLDGNKIKTTSELQVIYQGLAADKSAR IFSCGSGITACILILASVAAGHTNPILYDGSWADWGSRTDLPIEC
Sequences:
>Translated_285_residues MEYPLVSTQWLEAHLTDPHLVLLDASMETVIGKEPLVYDEPICIPRSRRFDLENVFCDKTSTQIHALPTFEQFSQGIAQL GIEADSVIVIYDNQGIYSSPRAWWTFKVMGFNRVYVLDGGLPQWIEEDRITSSRYQAEGVDYGPTDIDTLADVLQYHPER VMDAEAVLSRIEDAETAIVDARGAPRFLGQVSEPRPGVRSGHIPRSVNLPFAQVLDGNKIKTTSELQVIYQGLAADKSAR IFSCGSGITACILILASVAAGHTNPILYDGSWADWGSRTDLPIEC >Mature_285_residues MEYPLVSTQWLEAHLTDPHLVLLDASMETVIGKEPLVYDEPICIPRSRRFDLENVFCDKTSTQIHALPTFEQFSQGIAQL GIEADSVIVIYDNQGIYSSPRAWWTFKVMGFNRVYVLDGGLPQWIEEDRITSSRYQAEGVDYGPTDIDTLADVLQYHPER VMDAEAVLSRIEDAETAIVDARGAPRFLGQVSEPRPGVRSGHIPRSVNLPFAQVLDGNKIKTTSELQVIYQGLAADKSAR IFSCGSGITACILILASVAAGHTNPILYDGSWADWGSRTDLPIEC
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI61835204, Length=285, Percent_Identity=34.0350877192982, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI194473681, Length=285, Percent_Identity=34.0350877192982, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI194473668, Length=285, Percent_Identity=34.0350877192982, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI17402865, Length=287, Percent_Identity=32.7526132404181, Blast_Score=128, Evalue=5e-30, Organism=Escherichia coli, GI87082121, Length=284, Percent_Identity=35.5633802816901, Blast_Score=184, Evalue=8e-48, Organism=Caenorhabditis elegans, GI71997283, Length=252, Percent_Identity=26.1904761904762, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17561888, Length=263, Percent_Identity=26.9961977186312, Blast_Score=70, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6324825, Length=248, Percent_Identity=33.4677419354839, Blast_Score=118, Evalue=1e-27,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 31588; Mature: 31588
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYPLVSTQWLEAHLTDPHLVLLDASMETVIGKEPLVYDEPICIPRSRRFDLENVFCDKT CCCCCCCHHHHHHCCCCCEEEEEECCHHHHHCCCCCEECCCCCCCCCCCCCHHHEEECCC STQIHALPTFEQFSQGIAQLGIEADSVIVIYDNQGIYSSPRAWWTFKVMGFNRVYVLDGG CCEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCEEEEEECC LPQWIEEDRITSSRYQAEGVDYGPTDIDTLADVLQYHPERVMDAEAVLSRIEDAETAIVD CHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHHHCHHHHHCHHHHHHHHHCHHEEEEE ARGAPRFLGQVSEPRPGVRSGHIPRSVNLPFAQVLDGNKIKTTSELQVIYQGLAADKSAR CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCE IFSCGSGITACILILASVAAGHTNPILYDGSWADWGSRTDLPIEC EEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MEYPLVSTQWLEAHLTDPHLVLLDASMETVIGKEPLVYDEPICIPRSRRFDLENVFCDKT CCCCCCCHHHHHHCCCCCEEEEEECCHHHHHCCCCCEECCCCCCCCCCCCCHHHEEECCC STQIHALPTFEQFSQGIAQLGIEADSVIVIYDNQGIYSSPRAWWTFKVMGFNRVYVLDGG CCEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCEEEEEECC LPQWIEEDRITSSRYQAEGVDYGPTDIDTLADVLQYHPERVMDAEAVLSRIEDAETAIVD CHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHHHCHHHHHCHHHHHHHHHCHHEEEEE ARGAPRFLGQVSEPRPGVRSGHIPRSVNLPFAQVLDGNKIKTTSELQVIYQGLAADKSAR CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCE IFSCGSGITACILILASVAAGHTNPILYDGSWADWGSRTDLPIEC EEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]